4.0:Information of module
gai MeJA 1h
In comparison with Red/FR Light45min help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0048609 multicellular organismal reproductive pr... BP 7.142e-07
GO:0032504 multicellular organism reproduction BP 9.088e-07
GO:0009628 response to abiotic stimulus BP 2.998e-06
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0071554 cell wall organization or biogenesis BP 3.389e-09
GO:0000271 polysaccharide biosynthetic process BP 6.321e-09
GO:0005976 polysaccharide metabolic process BP 7.104e-09
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
gai MeJA 1h		 Log2 signal ratio
Red/FR Light45min
1 250611_at AT5G07200 ATGA20OX3, ARABIDOPSIS THALIANA GIBBERELLIN 20-OXIDASE 3, GA20OX3, gibberellin 20-oxidase 3, YAP169 0.793 0.004
2 254234_at AT4G23680 [Polyketide cyclase/dehydrase and lipid transport superfamily protein] 0.792 0.031
3 263963_at AT2G36080 ABS2, ABNORMAL SHOOT 2, NGAL1, NGATHA-Like 1 0.778 -0.000
4 254452_at AT4G21100 DDB1B, damaged DNA binding protein 1B 0.744 0.015
5 252629_at AT3G44970 [Cytochrome P450 superfamily protein] 0.742 -0.022
6 259009_at AT3G09260 BGLU23, LEB, LONG ER BODY, PSR3.1, PYK10 0.705 0.008
7 245668_at AT1G28330 AtDRM1, DRM1, DORMANCY-ASSOCIATED PROTEIN 1, DYL1, dormancy-associated protein-like 1 0.597 -0.010
8 256598_at AT3G30180 BR6OX2, brassinosteroid-6-oxidase 2, CYP85A2 0.560 0.037
9 262236_at AT1G48330 unknown 0.518 0.060
10 246929_at AT5G25210 unknown 0.510 0.059
11 263325_at AT2G04240 XERICO 0.509 0.007
12 263151_at AT1G54120 unknown 0.498 0.019
13 246855_at AT5G26280 [TRAF-like family protein] 0.486 0.010
14 245341_at AT4G16447 unknown 0.476 0.037
15 267361_at AT2G39920 [HAD superfamily, subfamily IIIB acid phosphatase ] 0.471 0.061
16 249895_at AT5G22500 FAR1, fatty acid reductase 1 0.463 -0.029
17 267472_at AT2G02850 ARPN, plantacyanin 0.457 0.055
18 261866_at AT1G50420 SCL-3, SCARECROW-LIKE 3, SCL3, scarecrow-like 3 0.456 -0.016
19 245501_at AT4G15620 [Uncharacterised protein family (UPF0497)] 0.448 0.065
20 259302_at AT3G05120 ATGID1A, GA INSENSITIVE DWARF1A, GID1A, GA INSENSITIVE DWARF1A 0.446 0.014
21 245602_at AT4G14270 unknown 0.429 0.057
22 259384_at AT3G16450 JAL33, Jacalin-related lectin 33 0.426 -0.000
23 263914_at AT2G36400 AtGRF3, growth-regulating factor 3, GRF3, growth-regulating factor 3 0.401 -0.003
24 258809_at AT3G04070 anac047, NAC domain containing protein 47, NAC047, NAC domain containing protein 47 0.399 0.005
25 258402_at AT3G15450 [Aluminium induced protein with YGL and LRDR motifs] 0.390 -0.005
26 254919_at AT4G11360 RHA1B, RING-H2 finger A1B 0.380 -0.014
27 249065_at AT5G44260 AtTZF5, TZF5, Tandem CCCH Zinc Finger protein 5 0.379 0.006
28 250907_at AT5G03670 TRM28, TON1 Recruiting Motif 28 0.366 0.033
29 264751_at AT1G23020 ATFRO3, FERRIC REDUCTION OXIDASE 3, FRO3, ferric reduction oxidase 3 0.364 -0.008
30 256455_at AT1G75190 unknown 0.363 0.051
31 257673_at AT3G20370 [TRAF-like family protein] 0.362 0.008
32 261459_at AT1G21100 IGMT1, indole glucosinolate O-methyltransferase 1 0.355 -0.027
33 261607_at AT1G49660 AtCXE5, carboxyesterase 5, CXE5, carboxyesterase 5 0.352 -0.024
34 265405_at AT2G16750 [Protein kinase protein with adenine nucleotide alpha hydrolases-like domain] 0.348 -0.003
35 260551_at AT2G43510 ATTI1, trypsin inhibitor protein 1, TI1, trypsin inhibitor protein 1 0.346 0.040
36 253575_at AT4G31060 [Integrase-type DNA-binding superfamily protein] 0.340 -0.033
37 253285_at AT4G34250 KCS16, 3-ketoacyl-CoA synthase 16 0.339 -0.014
38 261395_at AT1G79700 WRI4, WRINKLED 4 0.338 -0.009
39 260266_at AT1G68520 BBX14, B-box domain protein 14 0.329 -0.016
40 263947_at AT2G35820 [ureidoglycolate hydrolases] 0.329 0.003
41 246205_at AT4G36970 [Remorin family protein] 0.328 -0.003
42 261318_at AT1G53035 unknown 0.325 -0.013
43 247469_at AT5G62165 AGL42, AGAMOUS-like 42, FYF, FOREVER YOUNG FLOWER 0.325 -0.035
44 253662_at AT4G30080 ARF16, auxin response factor 16 0.323 0.023
45 251373_at AT3G60530 GATA4, GATA transcription factor 4 0.322 -0.004
46 253812_at AT4G28240 [Wound-responsive family protein] 0.321 -0.018
47 262040_at AT1G80080 AtRLP17, Receptor Like Protein 17, TMM, TOO MANY MOUTHS 0.321 -0.032
48 261272_at AT1G26665 [Mediator complex, subunit Med10] 0.311 0.001
49 247491_at AT5G61880 [Protein Transporter, Pam16] 0.307 -0.026
50 263046_at AT2G05380 GRP3S, glycine-rich protein 3 short isoform 0.304 -0.002
51 257949_at AT3G21750 UGT71B1, UDP-glucosyl transferase 71B1 0.299 -0.026
52 263333_at AT2G03890 ATPI4K GAMMA 7, phosphoinositide 4-kinase gamma 7, PI4K GAMMA 7, phosphoinositide 4-kinase gamma 7, UBDK GAMMA 7, UBIQUITIN-LIKE DOMAIN KINASE GAMMA 7 0.297 0.008
53 246262_at AT1G31790 [Tetratricopeptide repeat (TPR)-like superfamily protein] 0.295 -0.040
54 262096_at AT1G56010 anac021, Arabidopsis NAC domain containing protein 21, ANAC022, Arabidopsis NAC domain containing protein 22, NAC1, NAC domain containing protein 1 0.293 0.008
55 253096_at AT4G37330 CYP81D4, cytochrome P450, family 81, subfamily D, polypeptide 4 0.292 -0.002
56 249862_at AT5G22920 [CHY-type/CTCHY-type/RING-type Zinc finger protein] 0.291 -0.011
57 263847_at AT2G36970 [UDP-Glycosyltransferase superfamily protein] 0.279 -0.010
58 257615_at AT3G26510 [Octicosapeptide/Phox/Bem1p family protein] 0.278 0.001
59 258326_at AT3G22760 SOL1 0.275 -0.039
60 252093_at AT3G51500 unknown 0.271 0.037
61 251931_at AT3G53950 [glyoxal oxidase-related protein] 0.270 -0.006
62 261375_at AT1G53160 FTM6, FLORAL TRANSITION AT THE MERISTEM6, SPL4, squamosa promoter binding protein-like 4 0.269 0.011
63 266142_at AT2G39030 NATA1, N-acetyltransferase activity 1 0.266 -0.039
64 262967_at AT1G75730 unknown 0.264 -0.028
65 262355_at AT1G72820 Mitochondrial substrate carrier family protein 0.263 -0.009
66 258323_at AT3G22750 [Protein kinase superfamily protein] 0.260 0.030
67 253373_at AT4G33150 LKR, LKR/SDH, LYSINE-KETOGLUTARATE REDUCTASE/SACCHAROPINE DEHYDROGENASE, SDH, SACCHAROPINE DEHYDROGENASE 0.259 0.011
68 267397_at AT1G76170 [2-thiocytidine tRNA biosynthesis protein, TtcA] 0.258 -0.018
69 250167_at AT5G15310 ATMIXTA, ATMYB16, myb domain protein 16, MYB16, myb domain protein 16 0.255 -0.064
70 246278_at AT4G37190 [LOCATED IN: cytosol, plasma membrane] 0.255 0.006
71 262049_at AT1G80180 unknown 0.255 0.017
72 261294_at AT1G48430 [Dihydroxyacetone kinase] 0.249 0.021
73 246212_at AT4G36930 SPT, SPATULA 0.242 -0.024
74 262014_at AT1G35660 unknown 0.240 0.011
75 260876_at AT1G21460 AtSWEET1, SWEET1 0.235 0.012
76 266824_at AT2G22800 HAT9 0.233 0.018
77 251235_at AT3G62860 [alpha/beta-Hydrolases superfamily protein] 0.229 0.012
78 261086_at AT1G17460 TRFL3, TRF-like 3 0.226 -0.005
79 255782_at AT1G19850 ARF5, AUXIN RESPONSE FACTOR 5, IAA24, indole-3-acetic acid inducible 24, MP, MONOPTEROS 0.222 -0.003
80 266984_at AT2G39570 ACR9, ACT domain repeats 9 0.221 -0.006
81 264433_at AT1G61810 BGLU45, beta-glucosidase 45 0.221 0.020
82 246550_at AT5G14920 GASA14, A-stimulated in Arabidopsis 14 0.221 0.002
83 262170_at AT1G74940 unknown 0.220 0.036
84 247005_at AT5G67520 adenosine-5'-phosphosulfate (APS) kinase 4 0.216 0.032
85 246864_at AT5G25900 ATKO1, ARABIDOPSIS THALIANA ENT-KAURENE OXIDASE 1, CYP701A3, CYTOCHROME P450 701 A3, GA3, GA requiring 3 0.216 0.011
86 256890_at AT3G23830 AtGRP4, GR-RBP4, GRP4, glycine-rich RNA-binding protein 4 0.215 0.044
87 247212_at AT5G65040 unknown 0.215 -0.008
88 246028_at AT5G21170 5'-AMP-activated protein kinase beta-2 subunit protein 0.213 0.005
89 265902_at AT2G25590 [Plant Tudor-like protein] 0.211 0.003
90 250752_at AT5G05690 CBB3, CABBAGE 3, CPD, CONSTITUTIVE PHOTOMORPHOGENIC DWARF, CYP90, CYP90A, CYP90A1, CYTOCHROME P450 90A1, DWF3, DWARF 3 0.207 -0.010
91 247726_at AT5G59430 ATTRP1, TELOMERE REPEAT BINDING PROTEIN 1, TRP1, telomeric repeat binding protein 1 0.205 0.030
92 257008_at AT3G14210 ESM1, epithiospecifier modifier 1 0.203 -0.018
93 254293_at AT4G23060 IQD22, IQ-domain 22 0.202 -0.014
94 248841_at AT5G46740 UBP21, ubiquitin-specific protease 21 0.201 0.071
95 266875_at AT2G44800 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] -0.904 0.005
96 249522_at AT5G38700 unknown -0.856 -0.018
97 253827_at AT4G28085 unknown -0.744 0.037
98 251950_at AT3G53600 [C2H2-type zinc finger family protein] -0.741 0.009
99 245119_at AT2G41640 [Glycosyltransferase family 61 protein] -0.697 0.011
100 262128_at AT1G52690 LEA7, LATE EMBRYOGENESIS ABUNDANT 7 -0.644 0.037
101 260152_at AT1G52830 IAA6, indole-3-acetic acid 6, SHY1, SHORT HYPOCOTYL 1 -0.602 -0.013
102 255406_at AT4G03450 [Ankyrin repeat family protein] -0.575 -0.029
103 253100_at AT4G37400 CYP81F3, cytochrome P450, family 81, subfamily F, polypeptide 3 -0.566 -0.021
104 252529_at AT3G46490 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] -0.560 0.008
105 250764_at AT5G05960 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.537 0.000
106 260881_at AT1G21550 [Calcium-binding EF-hand family protein] -0.530 -0.002
107 250561_at AT5G08030 AtGDPD6, GDPD6, glycerophosphodiester phosphodiesterase 6 -0.520 -0.007
108 254809_at AT4G12410 SAUR35, SMALL AUXIN UPREGULATED RNA 35 -0.506 0.060
109 258807_at AT3G04030 MYR2 -0.494 0.019
110 254242_at AT4G23200 CRK12, cysteine-rich RLK (RECEPTOR-like protein kinase) 12 -0.493 -0.014
111 246495_at AT5G16200 [50S ribosomal protein-related] -0.493 -0.063
112 261428_at AT1G18870 ATICS2, ARABIDOPSIS ISOCHORISMATE SYNTHASE 2, ICS2, isochorismate synthase 2 -0.488 0.035
113 258270_at AT3G15650 [alpha/beta-Hydrolases superfamily protein] -0.482 -0.018
114 250098_at AT5G17350 unknown -0.466 -0.032
115 261212_at AT1G12880 atnudt12, nudix hydrolase homolog 12, NUDT12, nudix hydrolase homolog 12 -0.451 -0.015
116 257925_at AT3G23170 unknown -0.450 0.043
117 260255_at AT1G74330 [Protein kinase superfamily protein] -0.447 0.022
118 266447_at AT2G43290 MSS3, multicopy suppressors of snf4 deficiency in yeast 3 -0.447 0.020
119 255844_at AT2G33580 LYK5, LysM-containing receptor-like kinase 5 -0.446 0.042
120 264238_at AT1G54740 unknown -0.441 -0.020
121 267623_at AT2G39650 unknown -0.441 -0.033
122 255127_at AT4G08300 UMAMIT17, Usually multiple acids move in and out Transporters 17 -0.438 -0.014
123 248252_at AT5G53250 AGP22, arabinogalactan protein 22, ATAGP22, ARABINOGALACTAN PROTEIN 22 -0.433 -0.006
124 254024_at AT4G25780 [CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein] -0.423 -0.009
125 257254_at AT3G21950 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] -0.421 -0.010
126 260135_at AT1G66400 CML23, calmodulin like 23 -0.420 0.023
127 246108_at AT5G28630 [glycine-rich protein] -0.413 0.008
128 254041_at AT4G25830 [Uncharacterised protein family (UPF0497)] -0.412 0.001
129 250246_at AT5G13700 APAO, ATPAO1, polyamine oxidase 1, PAO1, polyamine oxidase 1 -0.406 0.001
130 245401_at AT4G17670 unknown -0.403 -0.048
131 249349_at AT5G40350 AtMYB24, myb domain protein 24, MYB24, myb domain protein 24 -0.399 -0.023
132 245654_at AT1G56540 [Disease resistance protein (TIR-NBS-LRR class) family] -0.379 -0.005
133 251509_at AT3G59010 PME35, pectin methylesterase 35, PME61, pectin methylesterase 61 -0.378 0.023
134 246366_at AT1G51850 [Leucine-rich repeat protein kinase family protein] -0.377 -0.050
135 253679_at AT4G29610 [Cytidine/deoxycytidylate deaminase family protein] -0.373 -0.014
136 251745_at AT3G55980 ATSZF1, SZF1, salt-inducible zinc finger 1 -0.368 0.010
137 263876_at AT2G21880 ATRAB7A, RAB GTPase homolog 7A, ATRABG2, ARABIDOPSIS RAB GTPASE HOMOLOG G2, RAB7A, RAB GTPase homolog 7A -0.368 -0.007
138 252624_at AT3G44735 ATPSK3, PHYTOSULFOKINE 3 PRECURSOR, PSK1, PSK3, PHYTOSULFOKINE 3 PRECURSOR -0.365 -0.015
139 256537_at AT1G33340 [ENTH/ANTH/VHS superfamily protein] -0.365 0.032
140 254917_at AT4G11350 unknown -0.365 0.040
141 253173_at AT4G35110 [Arabidopsis phospholipase-like protein (PEARLI 4) family] -0.364 0.003
142 261899_at AT1G80820 ATCCR2, CCR2, cinnamoyl coa reductase -0.363 -0.009
143 259834_at AT1G69570 [Dof-type zinc finger DNA-binding family protein] -0.358 -0.013
144 258953_at AT3G01430 unknown -0.353 0.028
145 248404_at AT5G51460 ATTPPA, TPPA, trehalose-6-phosphate phosphatase A -0.350 -0.014
146 250335_at AT5G11650 [alpha/beta-Hydrolases superfamily protein] -0.346 0.019
147 260840_at AT1G29050 TBL38, TRICHOME BIREFRINGENCE-LIKE 38 -0.341 0.002
148 245777_at AT1G73540 atnudt21, nudix hydrolase homolog 21, NUDT21, nudix hydrolase homolog 21 -0.340 0.030
149 265877_at AT2G42380 ATBZIP34, BZIP34 -0.339 0.001
150 252234_at AT3G49780 ATPSK3 (FORMER SYMBOL), ATPSK4, phytosulfokine 4 precursor, PSK4, phytosulfokine 4 precursor -0.338 0.008
151 264200_at AT1G22650 A/N-InvD, alkaline/neutral invertase D -0.338 0.065
152 264907_at AT2G17280 [Phosphoglycerate mutase family protein] -0.334 -0.042
153 259801_at AT1G72230 [Cupredoxin superfamily protein] -0.332 0.005
154 257375_at AT2G38640 unknown -0.331 -0.005
155 249705_at AT5G35580 [Protein kinase superfamily protein] -0.331 0.010
156 257051_at AT3G15270 SPL5, squamosa promoter binding protein-like 5 -0.330 0.025
157 258653_at AT3G09870 SAUR48, SMALL AUXIN UPREGULATED RNA 48 -0.328 -0.029
158 263513_at AT2G12400 unknown -0.328 0.013
159 251178_at AT3G63440 ATCKX6, CYTOKININ OXIDASE 6, ATCKX7, CKX6, cytokinin oxidase/dehydrogenase 6 -0.326 -0.040
160 259149_at AT3G10340 PAL4, phenylalanine ammonia-lyase 4 -0.323 -0.003
161 252557_at AT3G45960 ATEXLA3, expansin-like A3, ATEXPL3, ATHEXP BETA 2.3, EXLA3, expansin-like A3, EXPL3 -0.323 -0.033
162 256755_at AT3G25600 [Calcium-binding EF-hand family protein] -0.321 -0.017
163 254069_at AT4G25434 ATNUDT10, nudix hydrolase homolog 10, NUDT10, nudix hydrolase homolog 10 -0.317 -0.039
164 261772_at AT1G76240 unknown -0.317 -0.028
165 267038_at AT2G38480 [Uncharacterised protein family (UPF0497)] -0.316 0.004
166 251026_at AT5G02200 FHL, far-red-elongated hypocotyl1-like -0.315 0.003
167 261984_at AT1G33760 [Integrase-type DNA-binding superfamily protein] -0.315 -0.014
168 252692_at AT3G43960 [Cysteine proteinases superfamily protein] -0.315 0.000
169 248311_at AT5G52570 B2, BCH2, BETA CAROTENOID HYDROXYLASE 2, BETA-OHASE 2, beta-carotene hydroxylase 2, CHY2 -0.313 -0.007
170 256446_at AT3G11110 [RING/U-box superfamily protein] -0.310 0.049
171 255756_at AT1G19940 AtGH9B5, glycosyl hydrolase 9B5, GH9B5, glycosyl hydrolase 9B5 -0.306 -0.003
172 245740_at AT1G44100 AAP5, amino acid permease 5 -0.306 0.005
173 261777_at AT1G76210 unknown -0.305 0.032
174 261754_at AT1G76130 AMY2, alpha-amylase-like 2, ATAMY2, ARABIDOPSIS THALIANA ALPHA-AMYLASE-LIKE 2 -0.300 -0.007
175 261327_at AT1G44830 [Integrase-type DNA-binding superfamily protein] -0.295 -0.040
176 258003_at AT3G29030 ATEXP5, ARABIDOPSIS THALIANA EXPANSIN 5, ATEXPA5, ARABIDOPSIS THALIANA EXPANSIN A5, ATHEXP ALPHA 1.4, EXP5, EXPANSIN 5, EXPA5, expansin A5 -0.294 0.015
177 250399_at AT5G10750 unknown -0.293 0.027
178 264770_at AT1G23030 [ARM repeat superfamily protein] -0.288 -0.037
179 262912_at AT1G59740 AtNPF4.3, NPF4.3, NRT1/ PTR family 4.3 -0.288 -0.050
180 252383_at AT3G47780 ABCA7, ATP-binding cassette A7, ATATH6, A. THALIANA ABC2 HOMOLOG 6, ATH6, ABC2 homolog 6 -0.287 0.017
181 260296_at AT1G63750 [Disease resistance protein (TIR-NBS-LRR class) family] -0.286 -0.045
182 262901_at AT1G59910 [Actin-binding FH2 (formin homology 2) family protein] -0.285 0.018
183 256093_at AT1G20823 [RING/U-box superfamily protein] -0.281 -0.001
184 264909_at AT2G17300 unknown -0.277 0.011
185 265823_at AT2G35760 [Uncharacterised protein family (UPF0497)] -0.277 0.002
186 264184_at AT1G54790 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.276 -0.006
187 263108_at AT1G65240 [Eukaryotic aspartyl protease family protein] -0.270 -0.008