4.0:Information of module
miR393 0h
In comparison with aerial organ callus inducing medium 48 h help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0005982 starch metabolic process BP 3.543e-06
GO:0005976 polysaccharide metabolic process BP 3.098e-05
GO:0044264 cellular polysaccharide metabolic proces... BP 6.478e-05
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0042537 benzene-containing compound metabolic pr... BP 6.763e-04
GO:0009697 salicylic acid biosynthetic process BP 1.156e-03
GO:0009696 salicylic acid metabolic process BP 1.629e-03
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
miR393 0h		 Log2 signal ratio
aerial organ callus inducing medium 48 h
1 250955_at AT5G03190 CPUORF47, conserved peptide upstream open reading frame 47 0.227 0.022
2 251174_at AT3G63200 PLA IIIB, PLP9, PATATIN-like protein 9 0.216 -0.001
3 252971_at AT4G38770 ATPRP4, ARABIDOPSIS THALIANA PROLINE-RICH PROTEIN 4, PRP4, proline-rich protein 4 0.212 -0.043
4 261819_at AT1G11410 [S-locus lectin protein kinase family protein] 0.151 -0.222
5 254737_at AT4G13840 CER26, ECERIFERUM 26 0.145 -0.099
6 251853_at AT3G54790 [ARM repeat superfamily protein] 0.137 -0.008
7 260547_at AT2G43550 [Scorpion toxin-like knottin superfamily protein] 0.135 -0.549
8 247439_at AT5G62670 AHA11, H(+)-ATPase 11, HA11, H(+)-ATPase 11 0.134 -0.083
9 262230_at AT1G68560 ATXYL1, ALPHA-XYLOSIDASE 1, AXY3, altered xyloglucan 3, TRG1, thermoinhibition resistant germination 1, XYL1, alpha-xylosidase 1 0.130 0.096
10 253218_at AT4G34980 SLP2, subtilisin-like serine protease 2 0.121 -0.122
11 256890_at AT3G23830 AtGRP4, GR-RBP4, GRP4, glycine-rich RNA-binding protein 4 0.120 0.201
12 259005_at AT3G01930 [Major facilitator superfamily protein] 0.117 0.097
13 259430_at AT1G01610 ATGPAT4, GLYCEROL-3-PHOSPHATE sn-2-ACYLTRANSFERASE 4, GPAT4, GLYCEROL-3-PHOSPHATE sn-2-ACYLTRANSFERASE 4 0.116 -0.066
14 249986_at AT5G18460 unknown 0.115 -0.098
15 260857_at AT1G21880 LYM1, lysm domain GPI-anchored protein 1 precursor, LYP2, LysM-containing receptor protein 2 0.114 -0.069
16 258543_at AT3G06870 [proline-rich family protein] 0.111 -0.170
17 249785_at AT5G24300 ATSS1, STARCH SYNTHASE 1, SS1, starch synthase 1 0.104 -0.148
18 245504_at AT4G15660 [Thioredoxin superfamily protein] 0.099 0.252
19 251301_at AT3G61880 CYP78A9, cytochrome p450 78a9 0.098 -0.132
20 260288_at AT1G80530 [Major facilitator superfamily protein] 0.096 -0.040
21 258738_at AT3G05750 TRM6, TON1 Recruiting Motif 6 0.093 -0.219
22 249818_at AT5G23860 TUB8, tubulin beta 8 0.091 -0.152
23 256681_at AT3G52340 ATSPP2, SUCROSE-PHOSPHATASE 2, SPP2, sucrose-6F-phosphate phosphohydrolase 2 0.090 0.037
24 258086_at AT3G25860 LTA2, PLE2, PLASTID E2 SUBUNIT OF PYRUVATE DECARBOXYLASE 0.090 -0.134
25 245417_at AT4G17360 [Formyl transferase] 0.086 -0.340
26 262582_at AT1G15410 [aspartate-glutamate racemase family] 0.085 -0.020
27 261903_at AT1G80740 CMT1, chromomethylase 1, DMT4, DNA METHYLTRANSFERASE 4 0.085 -0.098
28 263755_at AT2G21340 [MATE efflux family protein] 0.084 -0.269
29 264943_at AT1G76910 unknown 0.083 0.039
30 262870_at AT1G64710 [GroES-like zinc-binding dehydrogenase family protein] 0.081 0.145
31 248028_at AT5G55620 unknown 0.079 -0.224
32 262920_at AT1G79500 AtkdsA1 0.078 -0.030
33 258185_at AT3G21580 ABCI12, ATP-binding cassette I12 0.076 -0.279
34 250329_at AT5G11800 ATKEA6, ARABIDOPSIS THALIANA K+ EFFLUX ANTIPORTER 6, KEA6, K+ efflux antiporter 6 0.074 -0.022
35 266254_at AT2G27810 ATNAT12, ARABIDOPSIS NUCLEOBASE-ASCORBATE TRANSPORTER 12, NAT12, nucleobase-ascorbate transporter 12 0.074 -0.146
36 254889_at AT4G11650 ATOSM34, osmotin 34, OSM34, osmotin 34 -0.566 0.569
37 260225_at AT1G74590 ATGSTU10, GLUTATHIONE S-TRANSFERASE TAU 10, GSTU10, glutathione S-transferase TAU 10 -0.388 0.307
38 253044_at AT4G37290 unknown -0.386 0.608
39 267565_at AT2G30750 CYP71A12, cytochrome P450, family 71, subfamily A, polypeptide 12 -0.374 0.815
40 256647_at AT3G13610 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein -0.343 0.924
41 260405_at AT1G69930 ATGSTU11, glutathione S-transferase TAU 11, GSTU11, glutathione S-transferase TAU 11 -0.308 0.470
42 264148_at AT1G02220 ANAC003, NAC domain containing protein 3, NAC003, NAC domain containing protein 3 -0.302 0.172
43 246197_at AT4G37010 CEN2, centrin 2 -0.293 0.116
44 260261_at AT1G68450 PDE337, PIGMENT DEFECTIVE 337 -0.289 0.326
45 258203_at AT3G13950 unknown -0.265 0.010
46 245976_at AT5G13080 ATWRKY75, ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 75, WRKY75, WRKY DNA-binding protein 75 -0.256 0.479
47 266385_at AT2G14610 ATPR1, PATHOGENESIS-RELATED GENE 1, PR 1, PATHOGENESIS-RELATED GENE 1, PR1, pathogenesis-related gene 1 -0.246 -0.033
48 245082_at AT2G23270 unknown -0.241 0.278
49 258075_at AT3G25900 ATHMT-1, HMT-1 -0.240 0.308
50 256306_at AT1G30370 DLAH, DAD1-like acylhydrolase -0.237 0.245
51 250286_at AT5G13320 AtGH3.12, GDG1, GH3-LIKE DEFENSE GENE 1, GH3.12, GRETCHEN HAGEN 3.12, PBS3, AVRPPHB SUSCEPTIBLE 3, WIN3, HOPW1-1-INTERACTING 3 -0.233 0.080
52 266832_at AT2G30040 MAPKKK14, mitogen-activated protein kinase kinase kinase 14 -0.231 0.116
53 264343_at AT1G11850 unknown -0.218 -0.331
54 255630_at AT4G00700 [C2 calcium/lipid-binding plant phosphoribosyltransferase family protein] -0.212 0.041
55 263876_at AT2G21880 ATRAB7A, RAB GTPase homolog 7A, ATRABG2, ARABIDOPSIS RAB GTPASE HOMOLOG G2, RAB7A, RAB GTPase homolog 7A -0.206 -0.096
56 256883_at AT3G26440 unknown -0.203 0.251
57 264433_at AT1G61810 BGLU45, beta-glucosidase 45 -0.202 0.030
58 250493_at AT5G09800 [ARM repeat superfamily protein] -0.198 0.528
59 248154_at AT5G54400 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] -0.194 0.254
60 253754_at AT4G29020 [glycine-rich protein] -0.192 -0.024
61 260460_at AT1G68230 [Reticulon family protein] -0.189 -0.101
62 248164_at AT5G54490 PBP1, pinoid-binding protein 1 -0.187 0.412
63 261175_at AT1G04800 [glycine-rich protein] -0.182 -0.094
64 252825_at AT4G39890 AtRABH1c, RAB GTPase homolog H1C, RABH1c, RAB GTPase homolog H1C -0.182 0.142
65 249481_at AT5G38900 [Thioredoxin superfamily protein] -0.182 0.322
66 256933_at AT3G22600 LTPG5, glycosylphosphatidylinositol-anchored lipid protein transfer 5 -0.181 0.256
67 250796_at AT5G05300 unknown -0.181 0.094
68 260568_at AT2G43570 CHI, chitinase, putative -0.178 0.418
69 247333_at AT5G63600 ATFLS5, FLS5, flavonol synthase 5 -0.178 0.576