4.0:Information of module
miR393 0h
In comparison with Regenerating Stump Root Tip Cut 130 mm andn Recut 0 hrs Taking 70 mm of Stump (4dpg) help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0005982 starch metabolic process BP 3.543e-06
GO:0005976 polysaccharide metabolic process BP 3.098e-05
GO:0044264 cellular polysaccharide metabolic proces... BP 6.478e-05
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0042537 benzene-containing compound metabolic pr... BP 6.763e-04
GO:0009697 salicylic acid biosynthetic process BP 1.156e-03
GO:0009696 salicylic acid metabolic process BP 1.629e-03
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
miR393 0h		 Log2 signal ratio
Regenerating Stump Root Tip Cut 130 mm andn Recut 0 hrs Taking 70 mm of Stump (4dpg)
1 250955_at AT5G03190 CPUORF47, conserved peptide upstream open reading frame 47 0.227 -0.346
2 251174_at AT3G63200 PLA IIIB, PLP9, PATATIN-like protein 9 0.216 0.254
3 252971_at AT4G38770 ATPRP4, ARABIDOPSIS THALIANA PROLINE-RICH PROTEIN 4, PRP4, proline-rich protein 4 0.212 1.401
4 261819_at AT1G11410 [S-locus lectin protein kinase family protein] 0.151 -0.352
5 254737_at AT4G13840 CER26, ECERIFERUM 26 0.145 -0.246
6 251853_at AT3G54790 [ARM repeat superfamily protein] 0.137 0.256
7 260547_at AT2G43550 [Scorpion toxin-like knottin superfamily protein] 0.135 -0.033
8 247439_at AT5G62670 AHA11, H(+)-ATPase 11, HA11, H(+)-ATPase 11 0.134 0.680
9 262230_at AT1G68560 ATXYL1, ALPHA-XYLOSIDASE 1, AXY3, altered xyloglucan 3, TRG1, thermoinhibition resistant germination 1, XYL1, alpha-xylosidase 1 0.130 0.164
10 253218_at AT4G34980 SLP2, subtilisin-like serine protease 2 0.121 0.003
11 256890_at AT3G23830 AtGRP4, GR-RBP4, GRP4, glycine-rich RNA-binding protein 4 0.120 0.496
12 259005_at AT3G01930 [Major facilitator superfamily protein] 0.117 -0.019
13 259430_at AT1G01610 ATGPAT4, GLYCEROL-3-PHOSPHATE sn-2-ACYLTRANSFERASE 4, GPAT4, GLYCEROL-3-PHOSPHATE sn-2-ACYLTRANSFERASE 4 0.116 -0.669
14 249986_at AT5G18460 unknown 0.115 0.399
15 260857_at AT1G21880 LYM1, lysm domain GPI-anchored protein 1 precursor, LYP2, LysM-containing receptor protein 2 0.114 0.148
16 258543_at AT3G06870 [proline-rich family protein] 0.111 0.296
17 249785_at AT5G24300 ATSS1, STARCH SYNTHASE 1, SS1, starch synthase 1 0.104 0.597
18 245504_at AT4G15660 [Thioredoxin superfamily protein] 0.099 -0.357
19 251301_at AT3G61880 CYP78A9, cytochrome p450 78a9 0.098 -0.433
20 260288_at AT1G80530 [Major facilitator superfamily protein] 0.096 1.024
21 258738_at AT3G05750 TRM6, TON1 Recruiting Motif 6 0.093 -1.125
22 249818_at AT5G23860 TUB8, tubulin beta 8 0.091 1.239
23 256681_at AT3G52340 ATSPP2, SUCROSE-PHOSPHATASE 2, SPP2, sucrose-6F-phosphate phosphohydrolase 2 0.090 0.138
24 258086_at AT3G25860 LTA2, PLE2, PLASTID E2 SUBUNIT OF PYRUVATE DECARBOXYLASE 0.090 0.471
25 245417_at AT4G17360 [Formyl transferase] 0.086 0.530
26 262582_at AT1G15410 [aspartate-glutamate racemase family] 0.085 0.445
27 261903_at AT1G80740 CMT1, chromomethylase 1, DMT4, DNA METHYLTRANSFERASE 4 0.085 -0.369
28 263755_at AT2G21340 [MATE efflux family protein] 0.084 1.293
29 264943_at AT1G76910 unknown 0.083 0.054
30 262870_at AT1G64710 [GroES-like zinc-binding dehydrogenase family protein] 0.081 0.422
31 248028_at AT5G55620 unknown 0.079 -0.861
32 262920_at AT1G79500 AtkdsA1 0.078 -0.286
33 258185_at AT3G21580 ABCI12, ATP-binding cassette I12 0.076 -0.083
34 250329_at AT5G11800 ATKEA6, ARABIDOPSIS THALIANA K+ EFFLUX ANTIPORTER 6, KEA6, K+ efflux antiporter 6 0.074 0.234
35 266254_at AT2G27810 ATNAT12, ARABIDOPSIS NUCLEOBASE-ASCORBATE TRANSPORTER 12, NAT12, nucleobase-ascorbate transporter 12 0.074 0.050
36 254889_at AT4G11650 ATOSM34, osmotin 34, OSM34, osmotin 34 -0.566 -0.595
37 260225_at AT1G74590 ATGSTU10, GLUTATHIONE S-TRANSFERASE TAU 10, GSTU10, glutathione S-transferase TAU 10 -0.388 -0.029
38 253044_at AT4G37290 unknown -0.386 -0.272
39 267565_at AT2G30750 CYP71A12, cytochrome P450, family 71, subfamily A, polypeptide 12 -0.374 -0.253
40 256647_at AT3G13610 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein -0.343 -0.127
41 260405_at AT1G69930 ATGSTU11, glutathione S-transferase TAU 11, GSTU11, glutathione S-transferase TAU 11 -0.308 -0.284
42 264148_at AT1G02220 ANAC003, NAC domain containing protein 3, NAC003, NAC domain containing protein 3 -0.302 -0.574
43 246197_at AT4G37010 CEN2, centrin 2 -0.293 -1.032
44 260261_at AT1G68450 PDE337, PIGMENT DEFECTIVE 337 -0.289 -0.313
45 258203_at AT3G13950 unknown -0.265 -0.342
46 245976_at AT5G13080 ATWRKY75, ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 75, WRKY75, WRKY DNA-binding protein 75 -0.256 -0.871
47 266385_at AT2G14610 ATPR1, PATHOGENESIS-RELATED GENE 1, PR 1, PATHOGENESIS-RELATED GENE 1, PR1, pathogenesis-related gene 1 -0.246 0.767
48 245082_at AT2G23270 unknown -0.241 0.163
49 258075_at AT3G25900 ATHMT-1, HMT-1 -0.240 0.489
50 256306_at AT1G30370 DLAH, DAD1-like acylhydrolase -0.237 -0.493
51 250286_at AT5G13320 AtGH3.12, GDG1, GH3-LIKE DEFENSE GENE 1, GH3.12, GRETCHEN HAGEN 3.12, PBS3, AVRPPHB SUSCEPTIBLE 3, WIN3, HOPW1-1-INTERACTING 3 -0.233 -0.621
52 266832_at AT2G30040 MAPKKK14, mitogen-activated protein kinase kinase kinase 14 -0.231 0.713
53 264343_at AT1G11850 unknown -0.218 0.244
54 255630_at AT4G00700 [C2 calcium/lipid-binding plant phosphoribosyltransferase family protein] -0.212 0.108
55 263876_at AT2G21880 ATRAB7A, RAB GTPase homolog 7A, ATRABG2, ARABIDOPSIS RAB GTPASE HOMOLOG G2, RAB7A, RAB GTPase homolog 7A -0.206 -0.654
56 256883_at AT3G26440 unknown -0.203 0.846
57 264433_at AT1G61810 BGLU45, beta-glucosidase 45 -0.202 -1.066
58 250493_at AT5G09800 [ARM repeat superfamily protein] -0.198 -1.525
59 248154_at AT5G54400 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] -0.194 0.160
60 253754_at AT4G29020 [glycine-rich protein] -0.192 0.000
61 260460_at AT1G68230 [Reticulon family protein] -0.189 -0.332
62 248164_at AT5G54490 PBP1, pinoid-binding protein 1 -0.187 -0.250
63 261175_at AT1G04800 [glycine-rich protein] -0.182 -0.082
64 252825_at AT4G39890 AtRABH1c, RAB GTPase homolog H1C, RABH1c, RAB GTPase homolog H1C -0.182 -0.221
65 249481_at AT5G38900 [Thioredoxin superfamily protein] -0.182 -0.078
66 256933_at AT3G22600 LTPG5, glycosylphosphatidylinositol-anchored lipid protein transfer 5 -0.181 0.620
67 250796_at AT5G05300 unknown -0.181 0.103
68 260568_at AT2G43570 CHI, chitinase, putative -0.178 0.348
69 247333_at AT5G63600 ATFLS5, FLS5, flavonol synthase 5 -0.178 -0.569