4.0:Information of module
miR393 0h
In comparison with WT cotyledons help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0005982 starch metabolic process BP 3.543e-06
GO:0005976 polysaccharide metabolic process BP 3.098e-05
GO:0044264 cellular polysaccharide metabolic proces... BP 6.478e-05
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0042537 benzene-containing compound metabolic pr... BP 6.763e-04
GO:0009697 salicylic acid biosynthetic process BP 1.156e-03
GO:0009696 salicylic acid metabolic process BP 1.629e-03
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
miR393 0h		 Log2 signal ratio
WT cotyledons
1 250955_at AT5G03190 CPUORF47, conserved peptide upstream open reading frame 47 0.227 -0.344
2 251174_at AT3G63200 PLA IIIB, PLP9, PATATIN-like protein 9 0.216 0.220
3 252971_at AT4G38770 ATPRP4, ARABIDOPSIS THALIANA PROLINE-RICH PROTEIN 4, PRP4, proline-rich protein 4 0.212 1.679
4 261819_at AT1G11410 [S-locus lectin protein kinase family protein] 0.151 0.160
5 254737_at AT4G13840 CER26, ECERIFERUM 26 0.145 0.249
6 251853_at AT3G54790 [ARM repeat superfamily protein] 0.137 0.317
7 260547_at AT2G43550 [Scorpion toxin-like knottin superfamily protein] 0.135 0.906
8 247439_at AT5G62670 AHA11, H(+)-ATPase 11, HA11, H(+)-ATPase 11 0.134 0.797
9 262230_at AT1G68560 ATXYL1, ALPHA-XYLOSIDASE 1, AXY3, altered xyloglucan 3, TRG1, thermoinhibition resistant germination 1, XYL1, alpha-xylosidase 1 0.130 0.408
10 253218_at AT4G34980 SLP2, subtilisin-like serine protease 2 0.121 0.177
11 256890_at AT3G23830 AtGRP4, GR-RBP4, GRP4, glycine-rich RNA-binding protein 4 0.120 0.221
12 259005_at AT3G01930 [Major facilitator superfamily protein] 0.117 0.056
13 259430_at AT1G01610 ATGPAT4, GLYCEROL-3-PHOSPHATE sn-2-ACYLTRANSFERASE 4, GPAT4, GLYCEROL-3-PHOSPHATE sn-2-ACYLTRANSFERASE 4 0.116 0.004
14 249986_at AT5G18460 unknown 0.115 0.428
15 260857_at AT1G21880 LYM1, lysm domain GPI-anchored protein 1 precursor, LYP2, LysM-containing receptor protein 2 0.114 0.094
16 258543_at AT3G06870 [proline-rich family protein] 0.111 0.004
17 249785_at AT5G24300 ATSS1, STARCH SYNTHASE 1, SS1, starch synthase 1 0.104 0.947
18 245504_at AT4G15660 [Thioredoxin superfamily protein] 0.099 -0.213
19 251301_at AT3G61880 CYP78A9, cytochrome p450 78a9 0.098 -0.834
20 260288_at AT1G80530 [Major facilitator superfamily protein] 0.096 1.097
21 258738_at AT3G05750 TRM6, TON1 Recruiting Motif 6 0.093 -0.718
22 249818_at AT5G23860 TUB8, tubulin beta 8 0.091 1.163
23 256681_at AT3G52340 ATSPP2, SUCROSE-PHOSPHATASE 2, SPP2, sucrose-6F-phosphate phosphohydrolase 2 0.090 1.143
24 258086_at AT3G25860 LTA2, PLE2, PLASTID E2 SUBUNIT OF PYRUVATE DECARBOXYLASE 0.090 0.495
25 245417_at AT4G17360 [Formyl transferase] 0.086 0.953
26 262582_at AT1G15410 [aspartate-glutamate racemase family] 0.085 0.423
27 261903_at AT1G80740 CMT1, chromomethylase 1, DMT4, DNA METHYLTRANSFERASE 4 0.085 -0.750
28 263755_at AT2G21340 [MATE efflux family protein] 0.084 1.493
29 264943_at AT1G76910 unknown 0.083 -0.113
30 262870_at AT1G64710 [GroES-like zinc-binding dehydrogenase family protein] 0.081 0.711
31 248028_at AT5G55620 unknown 0.079 0.284
32 262920_at AT1G79500 AtkdsA1 0.078 -0.457
33 258185_at AT3G21580 ABCI12, ATP-binding cassette I12 0.076 0.081
34 250329_at AT5G11800 ATKEA6, ARABIDOPSIS THALIANA K+ EFFLUX ANTIPORTER 6, KEA6, K+ efflux antiporter 6 0.074 -0.019
35 266254_at AT2G27810 ATNAT12, ARABIDOPSIS NUCLEOBASE-ASCORBATE TRANSPORTER 12, NAT12, nucleobase-ascorbate transporter 12 0.074 0.206
36 254889_at AT4G11650 ATOSM34, osmotin 34, OSM34, osmotin 34 -0.566 -0.751
37 260225_at AT1G74590 ATGSTU10, GLUTATHIONE S-TRANSFERASE TAU 10, GSTU10, glutathione S-transferase TAU 10 -0.388 -0.292
38 253044_at AT4G37290 unknown -0.386 -0.512
39 267565_at AT2G30750 CYP71A12, cytochrome P450, family 71, subfamily A, polypeptide 12 -0.374 -0.434
40 256647_at AT3G13610 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein -0.343 -0.363
41 260405_at AT1G69930 ATGSTU11, glutathione S-transferase TAU 11, GSTU11, glutathione S-transferase TAU 11 -0.308 -0.751
42 264148_at AT1G02220 ANAC003, NAC domain containing protein 3, NAC003, NAC domain containing protein 3 -0.302 -0.798
43 246197_at AT4G37010 CEN2, centrin 2 -0.293 -1.285
44 260261_at AT1G68450 PDE337, PIGMENT DEFECTIVE 337 -0.289 -0.735
45 258203_at AT3G13950 unknown -0.265 -0.442
46 245976_at AT5G13080 ATWRKY75, ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 75, WRKY75, WRKY DNA-binding protein 75 -0.256 -1.067
47 266385_at AT2G14610 ATPR1, PATHOGENESIS-RELATED GENE 1, PR 1, PATHOGENESIS-RELATED GENE 1, PR1, pathogenesis-related gene 1 -0.246 0.520
48 245082_at AT2G23270 unknown -0.241 -0.198
49 258075_at AT3G25900 ATHMT-1, HMT-1 -0.240 0.200
50 256306_at AT1G30370 DLAH, DAD1-like acylhydrolase -0.237 -0.619
51 250286_at AT5G13320 AtGH3.12, GDG1, GH3-LIKE DEFENSE GENE 1, GH3.12, GRETCHEN HAGEN 3.12, PBS3, AVRPPHB SUSCEPTIBLE 3, WIN3, HOPW1-1-INTERACTING 3 -0.233 -1.010
52 266832_at AT2G30040 MAPKKK14, mitogen-activated protein kinase kinase kinase 14 -0.231 0.929
53 264343_at AT1G11850 unknown -0.218 0.914
54 255630_at AT4G00700 [C2 calcium/lipid-binding plant phosphoribosyltransferase family protein] -0.212 -0.522
55 263876_at AT2G21880 ATRAB7A, RAB GTPase homolog 7A, ATRABG2, ARABIDOPSIS RAB GTPASE HOMOLOG G2, RAB7A, RAB GTPase homolog 7A -0.206 -0.373
56 256883_at AT3G26440 unknown -0.203 0.555
57 264433_at AT1G61810 BGLU45, beta-glucosidase 45 -0.202 -1.181
58 250493_at AT5G09800 [ARM repeat superfamily protein] -0.198 -1.466
59 248154_at AT5G54400 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] -0.194 -0.073
60 253754_at AT4G29020 [glycine-rich protein] -0.192 0.695
61 260460_at AT1G68230 [Reticulon family protein] -0.189 -0.450
62 248164_at AT5G54490 PBP1, pinoid-binding protein 1 -0.187 -0.733
63 261175_at AT1G04800 [glycine-rich protein] -0.182 0.494
64 252825_at AT4G39890 AtRABH1c, RAB GTPase homolog H1C, RABH1c, RAB GTPase homolog H1C -0.182 -0.451
65 249481_at AT5G38900 [Thioredoxin superfamily protein] -0.182 -0.503
66 256933_at AT3G22600 LTPG5, glycosylphosphatidylinositol-anchored lipid protein transfer 5 -0.181 0.159
67 250796_at AT5G05300 unknown -0.181 -0.206
68 260568_at AT2G43570 CHI, chitinase, putative -0.178 -0.300
69 247333_at AT5G63600 ATFLS5, FLS5, flavonol synthase 5 -0.178 -1.126