4.0:Information of module
WT NAA 2h
In comparison with high R/FR help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0009733 response to auxin BP 6.504e-26
GO:0009725 response to hormone BP 2.086e-17
GO:0009719 response to endogenous stimulus BP 1.206e-15
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0001708 cell fate specification BP 3.945e-03
GO:0009411 response to UV BP 5.980e-03
GO:0045165 cell fate commitment BP 6.423e-03
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
WT NAA 2h		 Log2 signal ratio
high R/FR
1 245076_at AT2G23170 GH3.3 1.412 -0.051
2 253423_at AT4G32280 IAA29, indole-3-acetic acid inducible 29 0.921 -0.303
3 261766_at AT1G15580 ATAUX2-27, AUX2-27, AUXIN-INDUCIBLE 2-27, IAA5, indole-3-acetic acid inducible 5 0.920 -0.204
4 245397_at AT4G14560 AXR5, AUXIN RESISTANT 5, IAA1, indole-3-acetic acid inducible 1 0.783 -0.084
5 259773_at AT1G29500 SAUR66, SMALL AUXIN UPREGULATED RNA 66 0.705 -0.047
6 251017_at AT5G02760 APD7, Arabidopsis Pp2c clade D 7 0.686 -0.259
7 247474_at AT5G62280 unknown 0.672 -0.008
8 248279_at AT5G52910 ATIM, TIMELESS 0.669 0.013
9 252970_at AT4G38850 ATSAUR15, ARABIDOPSIS THALIANA SMALL AUXIN UPREGULATED 15, SAUR-AC1, ARABIDOPSIS COLUMBIA SAUR GENE 1, SAUR15, SMALL AUXIN UPREGULATED 15, SAUR_AC1, SMALL AUXIN UP RNA 1 FROM ARABIDOPSIS THALIANA ECOTYPE COLUMBIA 0.638 -0.034
10 266830_at AT2G22810 ACC4, 1-AMINOCYCLOPROPANE-1-CARBOXYLIC ACID SYNTHASE POLYPEPTIDE, ACS4, 1-aminocyclopropane-1-carboxylate synthase 4, ATACS4 0.633 -0.133
11 253103_at AT4G36110 SAUR9, SMALL AUXIN UPREGULATED RNA 9 0.625 -0.018
12 261717_at AT1G18400 BEE1, BR enhanced expression 1 0.621 -0.125
13 257766_at AT3G23030 IAA2, indole-3-acetic acid inducible 2 0.610 -0.070
14 248509_at AT5G50335 unknown 0.602 -0.095
15 257900_at AT3G28420 [Putative membrane lipoprotein] 0.583 -0.122
16 248801_at AT5G47370 HAT2 0.570 -0.064
17 253255_at AT4G34760 SAUR50, SMALL AUXIN UPREGULATED RNA 50 0.562 -0.066
18 259784_at AT1G29450 SAUR64, SMALL AUXIN UPREGULATED RNA 64 0.558 -0.126
19 252204_at AT3G50340 unknown 0.546 -0.095
20 251575_at AT3G58120 ATBZIP61, BZIP61 0.543 -0.058
21 252965_at AT4G38860 SAUR16, SMALL AUXIN UPREGULATED RNA 16 0.528 0.016
22 258399_at AT3G15540 IAA19, indole-3-acetic acid inducible 19, MSG2, MASSUGU 2 0.522 -0.108
23 262263_at AT1G70940 ATPIN3, ARABIDOPSIS PIN-FORMED 3, PIN3, PIN-FORMED 3 0.513 -0.010
24 256784_at AT3G13674 unknown -0.289 -0.041
25 245501_at AT4G15620 [Uncharacterised protein family (UPF0497)] -0.278 0.099
26 262811_at AT1G11700 unknown -0.267 0.044
27 258343_at AT3G22810 [FUNCTIONS IN: phosphoinositide binding] -0.260 -0.017
28 256589_at AT3G28740 CYP81D11, cytochrome P450, family 81, subfamily D, polypeptide 11 -0.259 0.063
29 264846_at AT2G17850 [Rhodanese/Cell cycle control phosphatase superfamily protein] -0.233 0.011
30 260890_at AT1G29090 [Cysteine proteinases superfamily protein] -0.223 0.082
31 250158_at AT5G15190 unknown -0.221 0.115
32 256093_at AT1G20823 [RING/U-box superfamily protein] -0.203 0.088
33 263876_at AT2G21880 ATRAB7A, RAB GTPase homolog 7A, ATRABG2, ARABIDOPSIS RAB GTPASE HOMOLOG G2, RAB7A, RAB GTPase homolog 7A -0.197 -0.067
34 258299_at AT3G23410 ATFAO3, ARABIDOPSIS FATTY ALCOHOL OXIDASE 3, FAO3, fatty alcohol oxidase 3 -0.190 0.019
35 265634_at AT2G25530 [AFG1-like ATPase family protein] -0.185 -0.109
36 262244_at AT1G48260 CIPK17, CBL-interacting protein kinase 17, SnRK3.21, SNF1-RELATED PROTEIN KINASE 3.21 -0.177 -0.073
37 251049_at AT5G02430 [Transducin/WD40 repeat-like superfamily protein] -0.171 -0.035
38 251725_at AT3G56260 unknown -0.168 0.081
39 264648_at AT1G09080 BIP3, binding protein 3 -0.168 0.041
40 245411_at AT4G17240 unknown -0.166 -0.011
41 260693_at AT1G32450 AtNPF7.3, NPF7.3, NRT1/ PTR family 7.3, NRT1.5, nitrate transporter 1.5 -0.160 0.099
42 260903_at AT1G02460 [Pectin lyase-like superfamily protein] -0.160 -0.130
43 253101_at AT4G37430 CYP81F1, CYTOCHROME P450 MONOOXYGENASE 81F1, CYP91A2, cytochrome P450, family 91, subfamily A, polypeptide 2 -0.159 -0.029
44 261593_at AT1G33170 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] -0.148 -0.022
45 246900_at AT5G25620 AtYUC6, YUC6, YUCCA6 -0.146 0.038