4.0:Information of module
AFB1 PSTDC3000 24h
In comparison with seedlings by volatiles from leafminer damaged Lima bean 48h help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0042542 response to hydrogen peroxide BP 6.163e-07
GO:0000302 response to reactive oxygen species BP 1.623e-05
GO:0009408 response to heat BP 2.913e-05
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0080167 response to karrikin BP 8.681e-04
GO:0048443 stamen development BP 4.956e-03
GO:0048466 androecium development BP 4.956e-03
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
AFB1 PSTDC3000 24h		 Log2 signal ratio
seedlings by volatiles from leafminer damaged Lima bean 48h
1 255417_at AT4G03190 AFB1, AUXIN SIGNALING F BOX PROTEIN 1, ATGRH1, GRH1, GRR1-like protein 1 0.681 -0.057
2 245049_at ATCG00050 RPS16, ribosomal protein S16 0.189 -0.106
3 247224_at AT5G65080 AGL68, AGAMOUS-like 68, MAF5, MADS AFFECTING FLOWERING 5 0.175 -0.062
4 256210_at AT1G50950 [INVOLVED IN: cell redox homeostasis] 0.166 0.060
5 258984_at AT3G08970 ATERDJ3A, TMS1, THERMOSENSITIVE MALE STERILE 1 0.166 0.082
6 267591_at AT2G39705 DVL11, DEVIL 11, RTFL8, ROTUNDIFOLIA like 8 0.165 -0.106
7 252250_at AT3G49790 [Carbohydrate-binding protein] 0.165 -0.125
8 256181_at AT1G51820 [Leucine-rich repeat protein kinase family protein] 0.155 -0.069
9 264339_at AT1G70290 ATTPS8, ATTPSC, TPS8, trehalose-6-phosphatase synthase S8 0.147 -0.202
10 245504_at AT4G15660 [Thioredoxin superfamily protein] 0.147 -0.059
11 257139_at AT3G28890 AtRLP43, receptor like protein 43, RLP43, receptor like protein 43 0.140 -0.029
12 249092_at AT5G43710 [Glycosyl hydrolase family 47 protein] 0.126 -0.017
13 251084_at AT5G01520 AIRP2, ABA Insensitive RING Protein 2, AtAIRP2 0.124 -0.130
14 249763_at AT5G24010 [Protein kinase superfamily protein] 0.121 -0.025
15 256772_at AT3G13750 BGAL1, beta galactosidase 1, BGAL1, beta-galactosidase 1 0.121 -0.242
16 262756_at AT1G16370 ATOCT6, ARABIDOPSIS THALIANA ORGANIC CATION/CARNITINE TRANSPORTER 6, OCT6, organic cation/carnitine transporter 6 0.117 -0.058
17 261485_at AT1G14360 ATUTR3, UTR3, UDP-galactose transporter 3 0.106 0.081
18 267164_at AT2G37700 [Fatty acid hydroxylase superfamily] 0.105 -0.016
19 253687_at AT4G29520 [LOCATED IN: endoplasmic reticulum, plasma membrane] 0.104 0.111
20 259540_at AT1G20640 NLP4, NIN-like protein 4 0.101 -0.032
21 265342_at AT2G18300 HBI1, HOMOLOG OF BEE2 INTERACTING WITH IBH 1 0.100 -0.128
22 252800_at AT3G42330 unknown 0.097 -0.045
23 247155_at AT5G65750 [2-oxoglutarate dehydrogenase, E1 component] 0.096 0.119
24 260896_at AT1G29310 [SecY protein transport family protein] 0.096 0.027
25 250596_at AT5G07780 AtFH19, FH19, formin homolog 19 0.095 -0.065
26 261924_at AT1G22550 [Major facilitator superfamily protein] 0.092 -0.218
27 262003_at AT1G64460 [Protein kinase superfamily protein] 0.092 -0.003
28 251443_at AT3G59940 KFB50, Kelch repeat F-box 50, KMD4, KISS ME DEADLY 4 0.091 -0.088
29 255310_at AT4G04955 ALN, allantoinase, ATALN, allantoinase 0.087 -0.149
30 250037_at AT5G18350 [Disease resistance protein (TIR-NBS-LRR class) family] 0.085 -0.019
31 254107_at AT4G25220 AtG3Pp2, glycerol-3-phosphate permease 2, G3Pp2, glycerol-3-phosphate permease 2, RHS15, root hair specific 15 0.085 -0.032
32 250387_at AT5G11290 unknown 0.084 -0.053
33 258385_at AT3G15510 ANAC056, Arabidopsis NAC domain containing protein 56, ATNAC2, NAC domain containing protein 2, NAC2, NAC domain containing protein 2, NARS1, NAC-REGULATED SEED MORPHOLOGY 1 0.082 -0.102
34 267483_at AT2G02810 ATUTR1, UDP-GALACTOSE TRANSPORTER 1, UTR1, UDP-galactose transporter 1 0.081 0.052
35 263902_at AT2G36230 APG10, ALBINO AND PALE GREEN 10, HISN3 0.081 0.057
36 246632_at AT1G29710 [Tetratricopeptide repeat (TPR)-like superfamily protein] 0.081 -0.002
37 253404_at AT4G32840 PFK6, phosphofructokinase 6 0.079 0.017
38 262833_at AT1G14750 SDS, SOLO DANCERS 0.078 -0.012
39 255460_at AT4G02800 unknown 0.078 -0.040
40 254465_at AT4G20420 [Tapetum specific protein TAP35/TAP44] 0.077 0.011
41 266408_at AT2G38520 [copia-like retrotransposon family, has a 8.4e-60 P-value blast match to dbj|BAA78427.1| polyprotein (AtRE2-2) (Arabidopsis thaliana) (Ty1_Copia-element)] 0.077 -0.010
42 262139_at AT1G52610 [Mutator-like transposase family, has a 2.0e-18 P-value blast match to GB:AAA21566 mudrA of transposon=MuDR (MuDr-element) (Zea mays)] 0.076 0.010
43 259264_at AT3G01260 [Galactose mutarotase-like superfamily protein] 0.076 -0.025
44 255218_at AT4G07700 [gypsy-like retrotransposon family (Athila), has a 3.9e-13 P-value blast match to GB:CAA57397 Athila ORF 1 (Arabidopsis thaliana)] 0.075 0.023
45 263734_at AT1G60030 ATNAT7, ARABIDOPSIS NUCLEOBASE-ASCORBATE TRANSPORTER 7, NAT7, nucleobase-ascorbate transporter 7 0.074 0.018
46 255491_at AT4G02670 AtIDD12, indeterminate(ID)-domain 12, IDD12, indeterminate(ID)-domain 12 0.072 0.009
47 255385_at AT4G03610 [Metallo-hydrolase/oxidoreductase superfamily protein] 0.072 -0.018
48 260741_at AT1G15040 GAT, glutamine amidotransferase, GAT1_2.1, glutamine amidotransferase 1_2.1 0.072 -0.030
49 258174_at AT3G21470 [Pentatricopeptide repeat (PPR-like) superfamily protein] 0.072 0.062
50 248231_at AT5G53770 [Nucleotidyltransferase family protein] 0.071 0.002
51 251946_at AT3G53540 TRM19, TON1 Recruiting Motif 19 0.071 -0.094
52 250605_at AT5G07570 [glycine/proline-rich protein] 0.068 -0.066
53 267645_at AT2G32860 BGLU33, beta glucosidase 33 -0.366 -0.041
54 263909_at AT2G36490 AtROS1, DML1, demeter-like 1, ROS1, REPRESSOR OF SILENCING1 -0.193 -0.047
55 262719_at AT1G43590 unknown -0.190 -0.313
56 255726_at AT1G25530 [Transmembrane amino acid transporter family protein] -0.160 0.041
57 256940_at AT3G30720 QQS, QUA-QUINE STARCH -0.160 -0.015
58 249920_at AT5G19260 FAF3, FANTASTIC FOUR 3 -0.149 -0.014
59 246274_at AT4G36620 GATA19, GATA transcription factor 19, HANL2, hanaba taranu like 2 -0.144 -0.141
60 252209_at AT3G50400 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.139 0.053
61 250933_at AT5G03170 ATFLA11, ARABIDOPSIS FASCICLIN-LIKE ARABINOGALACTAN-PROTEIN 11, FLA11, FASCICLIN-like arabinogalactan-protein 11 -0.138 -0.008
62 250661_at AT5G07030 [Eukaryotic aspartyl protease family protein] -0.135 0.028
63 267078_at AT2G40960 [Single-stranded nucleic acid binding R3H protein] -0.127 -0.070
64 253010_at AT4G37750 ANT, AINTEGUMENTA, CKC, CKC1, COMPLEMENTING A PROTEIN KINASE C MUTANT 1, DRG, DRAGON -0.125 -0.027
65 256602_at AT3G28310 unknown -0.123 -0.128
66 264520_at AT1G10010 AAP8, amino acid permease 8, ATAAP8 -0.122 -0.011
67 262752_at AT1G16330 CYCB3;1, cyclin b3;1 -0.112 -0.046
68 253419_at AT4G32780 [phosphoinositide binding] -0.111 -0.026
69 245875_at AT1G26240 [Proline-rich extensin-like family protein] -0.111 -0.024
70 261476_at AT1G14480 [Ankyrin repeat family protein] -0.109 -0.052
71 260320_at AT1G63930 ROH1, from the Czech 'roh' meaning 'corner' -0.107 -0.007
72 266712_at AT2G46750 AtGulLO2, GulLO2, L -gulono-1,4-lactone ( L -GulL) oxidase 2 -0.107 -0.077
73 257994_at AT3G19920 unknown -0.107 -0.022
74 253008_at AT4G38210 ATEXP20, ATEXPA20, expansin A20, ATHEXP ALPHA 1.23, EXP20, EXPANSIN 20, EXPA20, expansin A20 -0.106 0.031
75 263061_at AT2G18190 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.106 0.194
76 245792_at AT1G32100 ATPRR1, PRR1, pinoresinol reductase 1 -0.105 0.014
77 250031_at AT5G18240 ATMYR1, ARABIDOPSIS MYB-RELATED PROTEIN 1, MYR1, myb-related protein 1 -0.105 -0.140
78 266346_at AT2G01430 ATHB-17, ARABIDOPSIS THALIANA HOMEOBOX-LEUCINE ZIPPER PROTEIN 17, ATHB17, homeobox-leucine zipper protein 17, HB17, homeobox-leucine zipper protein 17 -0.105 -0.084
79 257764_at AT3G23010 AtRLP36, receptor like protein 36, RLP36, receptor like protein 36 -0.104 -0.164
80 248662_at AT5G48690 unknown -0.104 0.004
81 250230_at AT5G13900 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.104 -0.099
82 261606_at AT1G49570 [Peroxidase superfamily protein] -0.103 -0.020
83 267221_at AT2G02480 STI, STICHEL -0.103 -0.054
84 251485_at AT3G59550 ATRAD21.2, SISTER CHROMATID COHESION 1 PROTEIN 3, ATSYN3, SYN3 -0.102 0.053
85 247651_at AT5G59870 HTA6, histone H2A 6 -0.102 0.005
86 250587_at AT5G07640 [RING/U-box superfamily protein] -0.100 -0.024
87 262255_at AT1G53790 [F-box and associated interaction domains-containing protein] -0.100 0.034
88 262620_at AT1G06540 unknown -0.100 -0.063
89 247397_at AT5G62940 DOF5.6, DNA BINDING WITH ONE FINGER 5.6, HCA2, HIGH CAMBIAL ACTIVITY2 -0.099 -0.019
90 259696_at AT1G63150 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.099 0.018
91 251812_at AT3G54970 [D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein] -0.098 0.057
92 262140_at AT1G52470 [alpha/beta-Hydrolases superfamily protein] -0.097 0.008
93 251511_at AT3G59180 [Protein with RNI-like/FBD-like domains] -0.097 -0.034
94 245497_at AT4G16460 unknown -0.097 0.025
95 254070_at AT4G25430 TRM23, TON1 Recruiting Motif 23 -0.096 0.020
96 260506_at AT1G47210 CYCA3;2, cyclin-dependent protein kinase 3;2 -0.096 0.049
97 261067_at AT1G07460 [Concanavalin A-like lectin family protein] -0.095 -0.026
98 246315_at AT3G56870 unknown -0.095 0.027
99 260556_at AT2G43620 [Chitinase family protein] -0.095 -0.046
100 263977_at AT2G42660 [Homeodomain-like superfamily protein] -0.095 -0.004
101 265050_at AT1G52070 [Mannose-binding lectin superfamily protein] -0.095 -0.092
102 254515_at AT4G20270 BAM3, BARELY ANY MERISTEM 3 -0.094 -0.014
103 261550_at AT1G63450 RHS8, root hair specific 8, XUT1, XYLOGLUCAN-SPECIFIC GALACTURONOSYLTRANSFERASE 1 -0.093 -0.046