4.0:Information of module
WT 1wk -P
In comparison with Col in Pi deficiency medium help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0050896 response to stimulus BP 2.891e-30
GO:0006950 response to stress BP 2.983e-29
GO:0009605 response to external stimulus BP 8.681e-28
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0009668 plastid membrane organization BP 4.805e-17
GO:0010027 thylakoid membrane organization BP 4.805e-17
GO:0009657 plastid organization BP 1.804e-15
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
WT 1wk -P		 Log2 signal ratio
Col in Pi deficiency medium
1 262369_at AT1G73010 AtPPsPase1, pyrophosphate-specific phosphatase1, ATPS2, phosphate starvation-induced gene 2, PPsPase1, pyrophosphate-specific phosphatase1, PS2, phosphate starvation-induced gene 2 1.449 0.061
2 246001_at AT5G20790 unknown 1.246 0.224
3 266132_at AT2G45130 ATSPX3, ARABIDOPSIS THALIANA SPX DOMAIN GENE 3, SPX3, SPX domain gene 3 1.168 0.008
4 263391_at AT2G11810 ATMGD3, MGD3, MONOGALACTOSYL DIACYLGLYCEROL SYNTHASE 3, MGDC, monogalactosyldiacylglycerol synthase type C 1.134 0.021
5 259399_at AT1G17710 AtPEPC1, Arabidopsis thaliana phosphoethanolamine/phosphocholine phosphatase 1, PEPC1, phosphoethanolamine/phosphocholine phosphatase 1 1.129 -0.025
6 266766_at AT2G46880 ATPAP14, PAP14, purple acid phosphatase 14 1.003 0.004
7 261814_at AT1G08310 [alpha/beta-Hydrolases superfamily protein] 0.991 0.047
8 250798_at AT5G05340 PRX52, peroxidase 52 0.908 0.366
9 246075_at AT5G20410 ATMGD2, ARABIDOPSIS THALIANA MONOGALACTOSYLDIACYLGLYCEROL SYNTHASE 2, MGD2, monogalactosyldiacylglycerol synthase 2 0.903 -0.001
10 261020_at AT1G26390 [FAD-binding Berberine family protein] 0.894 -0.013
11 246071_at AT5G20150 ATSPX1, ARABIDOPSIS THALIANA SPX DOMAIN GENE 1, SPX1, SPX domain gene 1 0.885 0.374
12 250091_at AT5G17340 [Putative membrane lipoprotein] 0.884 -0.011
13 264893_at AT1G23140 [Calcium-dependent lipid-binding (CaLB domain) family protein] 0.850 0.164
14 253087_at AT4G36350 ATPAP25, ARABIDOPSIS THALIANA PURPLE ACID PHOSPHATASE 25, PAP25, purple acid phosphatase 25 0.821 -0.016
15 252414_at AT3G47420 AtG3Pp1, Glycerol-3-phosphate permease 1, ATPS3, phosphate starvation-induced gene 3, G3Pp1, Glycerol-3-phosphate permease 1, PS3, phosphate starvation-induced gene 3 0.795 0.260
16 258887_at AT3G05630 PDLZ2, PHOSPHOLIPASE D ZETA 2, PLDP2, phospholipase D P2, PLDZETA2, PHOSPHOLIPASE D ZETA 2 0.793 0.004
17 258570_at AT3G04530 ATPPCK2, PEPCK2, PHOSPHOENOLPYRUVATE CARBOXYLASE KINASE 2, PPCK2, phosphoenolpyruvate carboxylase kinase 2 0.755 0.036
18 258856_at AT3G02040 AtGDPD1, GDPD1, Glycerophosphodiester phosphodiesterase 1, SRG3, senescence-related gene 3 0.740 0.241
19 252730_at AT3G43110 unknown 0.736 0.044
20 256100_at AT1G13750 [Purple acid phosphatases superfamily protein] 0.717 0.005
21 251026_at AT5G02200 FHL, far-red-elongated hypocotyl1-like 0.712 0.082
22 255360_at AT4G03960 AtPFA-DSP4, PFA-DSP4, plant and fungi atypical dual-specificity phosphatase 4 0.704 0.193
23 260097_at AT1G73220 AtOCT1, organic cation/carnitine transporter1, OCT1, organic cation/carnitine transporter1 0.702 0.304
24 254111_at AT4G24890 ATPAP24, ARABIDOPSIS THALIANA PURPLE ACID PHOSPHATASE 24, PAP24, purple acid phosphatase 24 0.700 0.094
25 258158_at AT3G17790 ATACP5, ATPAP17, PAP17, purple acid phosphatase 17 0.694 0.351
26 256243_at AT3G12500 ATHCHIB, basic chitinase, B-CHI, CHI-B, HCHIB, basic chitinase, PR-3, PATHOGENESIS-RELATED 3, PR3, PATHOGENESIS-RELATED 3 0.677 0.062
27 263851_at AT2G04460 unknown 0.676 0.139
28 250500_at AT5G09530 PELPK1, Pro-Glu-Leu|Ile|Val-Pro-Lys 1, PRP10, proline-rich protein 10 0.672 0.043
29 253505_at AT4G31970 CYP82C2, cytochrome P450, family 82, subfamily C, polypeptide 2 0.667 -0.028
30 245567_at AT4G14630 GLP9, germin-like protein 9 0.659 -0.124
31 245882_at AT5G09470 DIC3, dicarboxylate carrier 3 0.657 -0.012
32 264783_at AT1G08650 ATPPCK1, PHOSPHOENOLPYRUVATE CARBOXYLASE KINASE 1, PPCK1, phosphoenolpyruvate carboxylase kinase 1 0.649 0.060
33 260201_at AT1G67600 [Acid phosphatase/vanadium-dependent haloperoxidase-related protein] 0.648 0.067
34 254543_at AT4G19810 ChiC, class V chitinase 0.639 0.039
35 250515_at AT5G09570 [Cox19-like CHCH family protein] 0.629 0.013
36 249752_at AT5G24660 LSU2, RESPONSE TO LOW SULFUR 2 0.596 0.110
37 252487_at AT3G46660 UGT76E12, UDP-glucosyl transferase 76E12 0.593 -0.010
38 256933_at AT3G22600 LTPG5, glycosylphosphatidylinositol-anchored lipid protein transfer 5 0.586 0.035
39 259553_x_at AT1G21310 ATEXT3, extensin 3, EXT3, extensin 3, RSH, ROOT-SHOOT-HYPOCOTYL DEFECTIVE 0.572 0.009
40 252006_at AT3G52820 ATPAP22, PURPLE ACID PHOSPHATASE 22, PAP22, purple acid phosphatase 22 0.567 0.127
41 245463_at AT4G17030 AT-EXPR, ATEXLB1, expansin-like B1, ATEXPR1, ATHEXP BETA 3.1, EXLB1, expansin-like B1, EXPR 0.567 0.077
42 252320_at AT3G48580 XTH11, xyloglucan endotransglucosylase/hydrolase 11 0.565 -0.015
43 261021_at AT1G26380 [FAD-binding Berberine family protein] 0.561 0.072
44 252269_at AT3G49580 LSU1, RESPONSE TO LOW SULFUR 1 0.554 0.085
45 263228_at AT1G30700 [FAD-binding Berberine family protein] 0.546 -0.042
46 245627_at AT1G56600 AtGolS2, galactinol synthase 2, GolS2, galactinol synthase 2 0.544 0.074
47 256014_at AT1G19200 unknown 0.539 0.068
48 258957_at AT3G01420 ALPHA-DOX1, alpha-dioxygenase 1, DIOX1, DOX1, PADOX-1, plant alpha dioxygenase 1 0.539 0.028
49 249465_at AT5G39720 AIG2L, avirulence induced gene 2 like protein 0.532 0.056
50 254215_at AT4G23700 ATCHX17, cation/H+ exchanger 17, CHX17, cation/H+ exchanger 17 0.531 0.020
51 247393_at AT5G63130 [Octicosapeptide/Phox/Bem1p family protein] 0.523 0.112
52 260549_at AT2G43535 [Scorpion toxin-like knottin superfamily protein] 0.517 0.017
53 263847_at AT2G36970 [UDP-Glycosyltransferase superfamily protein] 0.513 -0.025
54 264400_at AT1G61800 ATGPT2, ARABIDOPSIS GLUCOSE-6-PHOSPHATE/PHOSPHATE TRANSLOCATOR 2, GPT2, glucose-6-phosphate/phosphate translocator 2 0.506 -0.033
55 254889_at AT4G11650 ATOSM34, osmotin 34, OSM34, osmotin 34 0.504 0.000
56 257774_at AT3G29250 AtSDR4, SDR4, short-chain dehydrogenase reductase 4 0.502 0.003
57 262229_at AT1G68620 [alpha/beta-Hydrolases superfamily protein] 0.493 0.076
58 259040_at AT3G09270 ATGSTU8, glutathione S-transferase TAU 8, GSTU8, glutathione S-transferase TAU 8 0.490 0.006
59 260386_at AT1G74010 [Calcium-dependent phosphotriesterase superfamily protein] 0.485 0.039
60 245393_at AT4G16260 [Glycosyl hydrolase superfamily protein] 0.485 -0.007
61 248467_at AT5G50800 AtSWEET13, SWEET13 0.480 0.061
62 267646_at AT2G32830 PHT1;5, phosphate transporter 1;5, PHT5, PHOSPHATE TRANSPORTER 5 0.467 0.019
63 254290_at AT4G23000 [Calcineurin-like metallo-phosphoesterase superfamily protein] 0.466 0.021
64 247314_at AT5G64000 ATSAL2, SAL2 0.453 0.156
65 258682_at AT3G08720 ATPK19, Arabidopsis thaliana protein kinase 19, ATPK2, ARABIDOPSIS THALIANA PROTEIN KINASE 2, ATS6K2, ARABIDOPSIS THALIANA SERINE/THREONINE PROTEIN KINASE 2, S6K2, serine/threonine protein kinase 2 0.452 0.127
66 260405_at AT1G69930 ATGSTU11, glutathione S-transferase TAU 11, GSTU11, glutathione S-transferase TAU 11 0.448 0.131
67 251143_at AT5G01220 SQD2, sulfoquinovosyldiacylglycerol 2 0.448 0.021
68 247026_at AT5G67080 MAPKKK19, mitogen-activated protein kinase kinase kinase 19 0.446 0.027
69 260254_at AT1G74210 AtGDPD5, GDPD5, glycerophosphodiester phosphodiesterase 5 0.436 0.036
70 252746_at AT3G43190 ATSUS4, ARABIDOPSIS THALIANA SUCROSE SYNTHASE 4, SUS4, sucrose synthase 4 0.429 0.128
71 245148_at AT2G45220 PME17, pectin methylesterase 17 0.428 0.073
72 258293_at AT3G23430 ATPHO1, ARABIDOPSIS PHOSPHATE 1, PHO1, phosphate 1 0.427 0.014
73 265334_at AT2G18370 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] 0.427 -0.006
74 267121_at AT2G23540 [GDSL-like Lipase/Acylhydrolase superfamily protein] 0.427 0.041
75 253044_at AT4G37290 unknown 0.421 0.144
76 267388_at AT2G44450 BGLU15, beta glucosidase 15 0.417 -0.023
77 256627_at AT3G19970 [alpha/beta-Hydrolases superfamily protein] 0.394 0.114
78 258182_at AT3G21500 DXL1, DXS-like 1, DXPS1, 1-deoxy-D-xylulose 5-phosphate synthase 1, DXS2, 1-deoxy-D-xylulose 5-phosphate (DXP) synthase 2 0.390 0.004
79 254343_at AT4G21990 APR3, APS reductase 3, ATAPR3, PRH-26, PRH26, PAPS REDUCTASE HOMOLOG 26 0.381 0.011
80 263168_at AT1G03020 [Thioredoxin superfamily protein] 0.379 -0.018
81 261684_at AT1G47400 unknown -0.822 -0.341
82 251196_at AT3G62950 [Thioredoxin superfamily protein] -0.773 0.053
83 263981_at AT2G42870 HLH1, HELIX-LOOP-HELIX 1, PAR1, PHY RAPIDLY REGULATED 1 -0.464 -0.055
84 260770_at AT1G49200 [RING/U-box superfamily protein] -0.383 0.048
85 251195_at AT3G62930 [Thioredoxin superfamily protein] -0.372 -0.074
86 266616_at AT2G29680 ATCDC6, CDC6, cell division control 6 -0.367 -0.094
87 253278_at AT4G34220 [Leucine-rich repeat protein kinase family protein] -0.365 -0.007
88 245506_at AT4G15700 [Thioredoxin superfamily protein] -0.335 -0.036
89 256569_at AT3G19550 unknown -0.312 -0.024
90 266078_at AT2G40670 ARR16, response regulator 16, RR16, response regulator 16 -0.312 -0.057
91 261395_at AT1G79700 WRI4, WRINKLED 4 -0.298 0.075
92 251704_at AT3G56360 unknown -0.293 -0.118
93 267580_at AT2G41990 unknown -0.292 0.036
94 266873_at AT2G44740 CYCP4;1, cyclin p4;1 -0.288 -0.067
95 262464_at AT1G50280 [Phototropic-responsive NPH3 family protein] -0.285 -0.042
96 267078_at AT2G40960 [Single-stranded nucleic acid binding R3H protein] -0.275 -0.024
97 262238_at AT1G48300 DGAT3, diacylglycerol acyltransferase 3 -0.264 -0.123
98 265208_at AT2G36690 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] -0.264 -0.217
99 254954_at AT4G10910 unknown -0.262 0.024
100 246275_at AT4G36540 BEE2, BR enhanced expression 2 -0.255 -0.040
101 255177_at AT4G08040 ACS11, 1-aminocyclopropane-1-carboxylate synthase 11 -0.249 -0.035
102 259996_at AT1G67910 unknown -0.247 -0.003
103 264638_at AT1G65480 FT, FLOWERING LOCUS T, RSB8, REDUCED STEM BRANCHING 8 -0.242 -0.005
104 253061_at AT4G37610 BT5, BTB and TAZ domain protein 5 -0.240 -0.001
105 249472_at AT5G39210 CRR7, CHLORORESPIRATORY REDUCTION 7 -0.238 -0.044
106 267094_at AT2G38080 ATLMCO4, ARABIDOPSIS LACCASE-LIKE MULTICOPPER OXIDASE 4, IRX12, IRREGULAR XYLEM 12, LAC4, LACCASE 4, LMCO4, LACCASE-LIKE MULTICOPPER OXIDASE 4 -0.234 -0.014
107 262871_at AT1G65010 [INVOLVED IN: flower development] -0.231 0.012
108 261308_at AT1G48480 RKL1, receptor-like kinase 1 -0.227 0.018
109 248075_at AT5G55740 CRR21, chlororespiratory reduction 21 -0.219 0.048
110 262010_at AT1G35612 [expressed protein] -0.216 0.029
111 248432_at AT5G51390 unknown -0.210 -0.068
112 244939_at ATCG00065 RPS12, RIBOSOMAL PROTEIN S12, RPS12A, ribosomal protein S12A -0.209 0.033
113 245296_at AT4G16370 oligopeptide transporter -0.205 -0.206
114 248924_at AT5G45960 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.197 0.001
115 260914_at AT1G02640 ATBXL2, BETA-XYLOSIDASE 2, BXL2, beta-xylosidase 2 -0.190 -0.060
116 245828_at AT1G57820 ORTH2, ORTHRUS 2, VIM1, VARIANT IN METHYLATION 1 -0.190 -0.025
117 267265_at AT2G22980 SCPL13, serine carboxypeptidase-like 13 -0.189 -0.052
118 261638_at AT1G49975 [INVOLVED IN: photosynthesis] -0.189 0.032
119 248279_at AT5G52910 ATIM, TIMELESS -0.189 -0.028
120 252946_at AT4G39235 unknown -0.188 0.067
121 261388_at AT1G05385 LPA19, LOW PSII ACCUMULATION 19, Psb27-H1 -0.185 0.057
122 259763_at AT1G77630 LYM3, lysin-motif (LysM) domain protein 3, LYP3, LysM-containing receptor protein 3 -0.185 -0.047
123 253010_at AT4G37750 ANT, AINTEGUMENTA, CKC, CKC1, COMPLEMENTING A PROTEIN KINASE C MUTANT 1, DRG, DRAGON -0.184 0.046
124 246034_at AT5G08350 [GRAM domain-containing protein / ABA-responsive protein-related] -0.184 0.146
125 261765_at AT1G15570 CYCA2;3, CYCLIN A2;3 -0.181 -0.004
126 266335_at AT2G32440 ATKAO2, ARABIDOPSIS ENT-KAURENOIC ACID HYDROXYLASE 2, CYP88A4, KAO2, ent-kaurenoic acid hydroxylase 2 -0.181 -0.064
127 255829_at AT2G40540 ATKT2, ATKUP2, KT2, potassium transporter 2, KUP2, SHY3, TRK2 -0.179 0.037
128 267578_at AT2G30695 unknown -0.177 -0.014
129 252501_at AT3G46880 unknown -0.176 -0.150
130 253495_at AT4G31850 PGR3, proton gradient regulation 3 -0.172 0.057
131 264346_at AT1G12010 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] -0.172 -0.119
132 250223_at AT5G14070 ROXY2 -0.171 -0.110
133 249861_at AT5G22875 unknown -0.171 0.038
134 258355_at AT3G14330 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.171 -0.033
135 260082_at AT1G78180 [Mitochondrial substrate carrier family protein] -0.169 0.017
136 253589_at AT4G30825 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.169 -0.015
137 267509_at AT2G45660 AGL20, AGAMOUS-like 20, ATSOC1, SUPPRESSOR OF OVEREXPRESSION OF CO 1, SOC1, SUPPRESSOR OF OVEREXPRESSION OF CO 1 -0.168 -0.013
138 254794_at AT4G12970 EPFL9, STOMAGEN, STOMAGEN -0.167 -0.005
139 258421_at AT3G16690 AtSWEET16, SWEET16 -0.167 -0.039
140 265349_at AT2G22610 [Di-glucose binding protein with Kinesin motor domain] -0.167 -0.003
141 250560_at AT5G08020 ATRPA70B, ARABIDOPSIS THALIANA RPA70-KDA SUBUNIT B, RPA70B, RPA70-kDa subunit B -0.165 -0.063
142 250453_at AT5G10620 [methyltransferases] -0.164 -0.022
143 248977_at AT5G45020 [Glutathione S-transferase family protein] -0.161 0.005
144 249996_at AT5G18600 [Thioredoxin superfamily protein] -0.159 0.050
145 259160_at AT3G05410 [Photosystem II reaction center PsbP family protein] -0.158 0.094
146 246792_at AT5G27290 unknown -0.158 -0.033
147 249392_at AT5G40150 [Peroxidase superfamily protein] -0.158 0.016
148 258956_at AT3G01440 PnsL3, Photosynthetic NDH subcomplex L 3, PQL1, PsbQ-like 1, PQL2, PsbQ-like 2 -0.158 -0.004
149 256970_at AT3G21090 ABCG15, ATP-binding cassette G15 -0.157 -0.031
150 246818_at AT5G27270 EMB976, EMBRYO DEFECTIVE 976 -0.155 -0.048
151 249129_at AT5G43080 CYCA3;1, Cyclin A3;1 -0.155 -0.055
152 259209_at AT3G09160 [RNA-binding (RRM/RBD/RNP motifs) family protein] -0.154 0.079
153 266589_at AT2G46250 [myosin heavy chain-related] -0.154 0.064
154 246885_at AT5G26230 MAKR1, membrane-associated kinase regulator 1 -0.152 -0.042
155 260685_at AT1G17650 AtGLYR2, GLYR2, glyoxylate reductase 2, GR2, GLYOXYLATE REDUCTASE 2 -0.149 0.039
156 255709_at AT4G00180 YAB3, YABBY3 -0.147 0.027
157 251976_at AT3G53240 AtRLP45, receptor like protein 45, RLP45, receptor like protein 45 -0.146 -0.067
158 247826_at AT5G58480 [O-Glycosyl hydrolases family 17 protein] -0.146 0.000
159 249210_at AT5G42670 [Agenet domain-containing protein] -0.146 0.014