4.0:Information of module
ein3-1eil1-1 dark
In comparison with CCA1-ox 6am non-polysomal help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0009637 response to blue light BP 2.046e-04
GO:0010583 response to cyclopentenone BP 1.572e-03
GO:0048527 lateral root development BP 3.452e-03
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0009873 ethylene-activated signaling pathway BP 1.275e-04
GO:0071369 cellular response to ethylene stimulus BP 3.419e-04
GO:0000160 phosphorelay signal transduction system BP 5.093e-04
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
ein3-1eil1-1 dark		 Log2 signal ratio
CCA1-ox 6am non-polysomal
1 251428_at AT3G60140 BGLU30, BETA GLUCOSIDASE 30, DIN2, DARK INDUCIBLE 2, SRG2, SENESCENCE-RELATED GENE 2 0.747 -0.109
2 257964_at AT3G19850 [Phototropic-responsive NPH3 family protein] 0.689 0.054
3 253066_at AT4G37770 ACS8, 1-amino-cyclopropane-1-carboxylate synthase 8 0.576 0.353
4 252983_at AT4G37980 ATCAD7, CAD7, CINNAMYL-ALCOHOL DEHYDROGENASE 7, ELI3, ELICITOR-ACTIVATED GENE 3, ELI3-1, elicitor-activated gene 3-1 0.549 -0.060
5 264238_at AT1G54740 unknown 0.546 0.139
6 250327_at AT5G12050 unknown 0.445 0.173
7 252911_at AT4G39510 CYP96A12, cytochrome P450, family 96, subfamily A, polypeptide 12 0.432 -0.000
8 253736_at AT4G28780 [GDSL-like Lipase/Acylhydrolase superfamily protein] 0.427 -0.014
9 258181_at AT3G21670 AtNPF6.4, NPF6.4, NRT1/ PTR family 6.4 0.401 0.103
10 263126_at AT1G78460 [SOUL heme-binding family protein] 0.362 -0.024
11 251026_at AT5G02200 FHL, far-red-elongated hypocotyl1-like 0.342 -0.076
12 259789_at AT1G29395 COR413-TM1, COLD REGULATED 314 THYLAKOID MEMBRANE 1, COR413IM1, COLD REGULATED 314 INNER MEMBRANE 1, COR414-TM1, cold regulated 414 thylakoid membrane 1 0.342 0.071
13 245352_at AT4G15490 UGT84A3 0.329 -0.419
14 247252_at AT5G64770 CLEL 9, CLE-like 9, GLV2, GOLVEN 2, RGF9, root meristem growth factor 9 0.327 0.123
15 258901_at AT3G05640 [Protein phosphatase 2C family protein] 0.287 0.100
16 257949_at AT3G21750 UGT71B1, UDP-glucosyl transferase 71B1 0.281 0.077
17 261399_at AT1G79620 [Leucine-rich repeat protein kinase family protein] 0.262 0.302
18 245593_at AT4G14550 IAA14, indole-3-acetic acid inducible 14, SLR, SOLITARY ROOT 0.248 -0.031
19 265161_at AT1G30900 BP80-3;3, binding protein of 80 kDa 3;3, VSR3;3, VACUOLAR SORTING RECEPTOR 3;3, VSR6, VACUOLAR SORTING RECEPTOR 6 0.245 -0.066
20 248772_at AT5G47800 [Phototropic-responsive NPH3 family protein] 0.234 -0.032
21 247880_at AT5G57780 P1R1, P1R1 0.232 0.043
22 264529_at AT1G30820 [CTP synthase family protein] 0.216 -0.072
23 250611_at AT5G07200 ATGA20OX3, ARABIDOPSIS THALIANA GIBBERELLIN 20-OXIDASE 3, GA20OX3, gibberellin 20-oxidase 3, YAP169 0.214 -0.127
24 249919_at AT5G19250 [Glycoprotein membrane precursor GPI-anchored] -1.164 -0.147
25 260957_at AT1G06080 ADS1, delta 9 desaturase 1, AtADS1 -0.878 -0.004
26 263894_at AT2G21910 CYP96A5, cytochrome P450, family 96, subfamily A, polypeptide 5 -0.829 0.038
27 253684_at AT4G29690 [Alkaline-phosphatase-like family protein] -0.728 0.023
28 254818_at AT4G12470 AZI1, azelaic acid induced 1 -0.709 0.072
29 254876_at AT4G11610 [C2 calcium/lipid-binding plant phosphoribosyltransferase family protein] -0.704 -0.226
30 253054_at AT4G37580 COP3, CONSTITUTIVE PHOTOMORPHOGENIC 3, HLS1, HOOKLESS 1, UNS2, UNUSUAL SUGAR RESPONSE 2 -0.618 0.048
31 267230_at AT2G44080 ARL, ARGOS-like -0.609 0.020
32 246922_at AT5G25110 CIPK25, CBL-interacting protein kinase 25, SnRK3.25, SNF1-RELATED PROTEIN KINASE 3.25 -0.561 -0.031
33 247337_at AT5G63660 LCR74, LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 74, PDF2.5 -0.530 0.035
34 247023_at AT5G67060 HEC1, HECATE 1 -0.502 0.092
35 266277_at AT2G29310 [NAD(P)-binding Rossmann-fold superfamily protein] -0.496 -0.022
36 250045_at AT5G17700 [MATE efflux family protein] -0.487 -0.017
37 249645_at AT5G36910 THI2.2, thionin 2.2 -0.457 -0.112
38 266877_at AT2G44570 AtGH9B12, glycosyl hydrolase 9B12, GH9B12, glycosyl hydrolase 9B12 -0.435 0.267
39 253040_at AT4G37800 XTH7, xyloglucan endotransglucosylase/hydrolase 7 -0.377 -0.066
40 263680_at AT1G26930 [Galactose oxidase/kelch repeat superfamily protein] -0.355 -0.050
41 261559_at AT1G01780 PLIM2b, PLIM2b -0.352 0.164
42 250907_at AT5G03670 TRM28, TON1 Recruiting Motif 28 -0.309 -0.059
43 259961_at AT1G53700 PK3AT, PROTEIN KINASE 3 ARABIDOPSIS THALIANA, WAG1, WAG 1 -0.302 -0.132
44 253285_at AT4G34250 KCS16, 3-ketoacyl-CoA synthase 16 -0.280 0.119
45 265053_at AT1G52000 [Mannose-binding lectin superfamily protein] -0.278 -0.038
46 252200_at AT3G50280 [HXXXD-type acyl-transferase family protein] -0.254 -0.128