4.0:Information of module
expressing C2 MeJA
In comparison with Elevated CO2 AMPLE N NIGHT help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0044281 small molecule metabolic process BP 1.654e-16
GO:0044711 single-organism biosynthetic process BP 1.745e-15
GO:0044710 single-organism metabolic process BP 1.957e-15
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0009814 defense response, incompatible interacti... BP 1.992e-14
GO:0009627 systemic acquired resistance BP 3.248e-14
GO:0045087 innate immune response BP 1.383e-13
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
expressing C2 MeJA		 Log2 signal ratio
Elevated CO2 AMPLE N NIGHT
1 254550_at AT4G19690 ATIRT1, ARABIDOPSIS IRON-REGULATED TRANSPORTER 1, IRT1, iron-regulated transporter 1 0.814 -0.072
2 266276_at AT2G29330 TRI, tropinone reductase 0.461 -0.043
3 258270_at AT3G15650 [alpha/beta-Hydrolases superfamily protein] 0.401 0.211
4 256459_at AT1G36180 ACC2, acetyl-CoA carboxylase 2 0.401 -0.023
5 265422_at AT2G20800 NDB4, NAD(P)H dehydrogenase B4 0.328 -0.008
6 252510_at AT3G46270 [receptor protein kinase-related] 0.312 -0.014
7 265031_at AT1G61590 [Protein kinase superfamily protein] 0.300 -0.016
8 245196_at AT1G67750 [Pectate lyase family protein] 0.268 -0.100
9 265471_at AT2G37130 [Peroxidase superfamily protein] 0.256 0.114
10 258745_at AT3G05920 [Heavy metal transport/detoxification superfamily protein ] 0.252 -0.037
11 250476_at AT5G10140 AGL25, AGAMOUS-like 25, FLC, FLOWERING LOCUS C, FLF, FLOWERING LOCUS F, RSB6, REDUCED STEM BRANCHING 6 0.217 -0.019
12 264898_at AT1G23205 [Plant invertase/pectin methylesterase inhibitor superfamily protein] 0.216 -0.023
13 247893_at AT5G57980 RPB5C, RNA polymerase II fifth largest subunit, C 0.212 -0.065
14 252699_at AT3G43680 unknown 0.207 -0.092
15 249127_at AT5G43500 ARP9, actin-related protein 9, ATARP9, actin-related protein 9 0.201 -0.075
16 247612_at AT5G60730 [Anion-transporting ATPase] 0.199 0.034
17 251480_at AT3G59710 [NAD(P)-binding Rossmann-fold superfamily protein] 0.199 0.006
18 251354_at AT3G61090 [Putative endonuclease or glycosyl hydrolase] 0.197 -0.065
19 248407_at AT5G51500 [Plant invertase/pectin methylesterase inhibitor superfamily] 0.192 -0.078
20 248467_at AT5G50800 AtSWEET13, SWEET13 0.191 -0.130
21 267078_at AT2G40960 [Single-stranded nucleic acid binding R3H protein] 0.188 -0.053
22 246911_at AT5G25810 tny, TINY 0.178 -0.011
23 250208_at AT5G14000 anac084, NAC domain containing protein 84, NAC084, NAC domain containing protein 84 0.171 -0.049
24 263707_at AT1G09300 [Metallopeptidase M24 family protein] 0.163 -0.048
25 253831_at AT4G27580 unknown 0.162 0.033
26 250778_at AT5G05500 MOP10 0.161 -0.087
27 251749_at AT3G55690 unknown 0.159 0.039
28 267313_at AT2G34740 [Protein phosphatase 2C family protein] 0.159 -0.057
29 254107_at AT4G25220 AtG3Pp2, glycerol-3-phosphate permease 2, G3Pp2, glycerol-3-phosphate permease 2, RHS15, root hair specific 15 0.153 0.007
30 264647_at AT1G09090 ATRBOHB, respiratory burst oxidase homolog B, ATRBOHB-BETA, RBOHB, respiratory burst oxidase homolog B 0.153 -0.083
31 258700_at AT3G09710 IQD1, IQ-domain 1 0.152 0.014
32 259786_at AT1G29660 [GDSL-like Lipase/Acylhydrolase superfamily protein] 0.151 -0.023
33 253579_at AT4G30610 BRS1, BRI1 SUPPRESSOR 1, SCPL24, SERINE CARBOXYPEPTIDASE 24 PRECURSOR 0.150 -0.247
34 264251_at AT1G09190 [Tetratricopeptide repeat (TPR)-like superfamily protein] 0.149 -0.036
35 258211_at AT3G17890 unknown 0.142 -0.036
36 266109_at AT2G37890 [Mitochondrial substrate carrier family protein] 0.140 0.036
37 256361_at AT1G66520 pde194, pigment defective 194 0.140 -0.065
38 259503_at AT1G15870 [Mitochondrial glycoprotein family protein] 0.139 0.001
39 249034_at AT5G44160 AtIDD8, IDD8, INDETERMINATE DOMAIN 8, NUC, nutcracker 0.139 0.071
40 258856_at AT3G02040 AtGDPD1, GDPD1, Glycerophosphodiester phosphodiesterase 1, SRG3, senescence-related gene 3 0.138 -0.011
41 256006_at AT1G34070 unknown 0.138 0.009
42 258034_at AT3G21300 [RNA methyltransferase family protein] 0.136 -0.048
43 261187_at AT1G32860 [Glycosyl hydrolase superfamily protein] 0.136 -0.064
44 252864_at AT4G39740 HCC2, homologue of copper chaperone SCO1 2 0.133 0.030
45 259308_at AT3G05180 [GDSL-like Lipase/Acylhydrolase superfamily protein] 0.133 -0.186
46 261766_at AT1G15580 ATAUX2-27, AUX2-27, AUXIN-INDUCIBLE 2-27, IAA5, indole-3-acetic acid inducible 5 0.133 -0.071
47 254483_at AT4G20740 EMB3131, EMBRYO DEFECTIVE 3131 0.132 -0.024
48 262337_at AT1G64260 [MuDR family transposase] 0.129 -0.125
49 254589_at AT4G18850 unknown 0.129 0.027
50 259900_at AT1G71230 AJH2, CSN5, CSN5B, COP9-signalosome 5B 0.128 0.071
51 266729_at AT2G03130 [Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein] 0.126 0.037
52 267131_at AT2G23400 [Undecaprenyl pyrophosphate synthetase family protein] 0.125 -0.040
53 247343_at AT5G63740 [RING/U-box superfamily protein] 0.125 0.030
54 250196_at AT5G14580 [polyribonucleotide nucleotidyltransferase, putative] 0.124 0.010
55 266385_at AT2G14610 ATPR1, PATHOGENESIS-RELATED GENE 1, PR 1, PATHOGENESIS-RELATED GENE 1, PR1, pathogenesis-related gene 1 -0.890 0.634
56 266070_at AT2G18660 AtPNP-A, PNP-A, plant natriuretic peptide A -0.761 0.276
57 250445_at AT5G10760 [Eukaryotic aspartyl protease family protein] -0.657 0.116
58 259561_at AT1G21250 AtWAK1, PRO25, WAK1, cell wall-associated kinase 1 -0.583 0.082
59 265837_at AT2G14560 LURP1, LATE UPREGULATED IN RESPONSE TO HYALOPERONOSPORA PARASITICA -0.570 0.074
60 250351_at AT5G12030 AT-HSP17.6A, heat shock protein 17.6A, HSP17.6, HEAT SHOCK PROTEIN 17.6, HSP17.6A, heat shock protein 17.6A -0.562 0.071
61 249202_at AT5G42580 CYP705A12, cytochrome P450, family 705, subfamily A, polypeptide 12 -0.549 -0.060
62 257592_at AT3G24982 ATRLP40, receptor like protein 40, RLP40, receptor like protein 40 -0.538 0.291
63 256878_at AT3G26460 [Polyketide cyclase/dehydrase and lipid transport superfamily protein] -0.505 -0.106
64 266292_at AT2G29350 SAG13, senescence-associated gene 13 -0.504 0.334
65 263210_at AT1G10585 [basic helix-loop-helix (bHLH) DNA-binding superfamily protein] -0.489 -0.047
66 248322_at AT5G52760 [Copper transport protein family] -0.470 0.253
67 261956_at AT1G64590 [NAD(P)-binding Rossmann-fold superfamily protein] -0.426 -0.000
68 256368_at AT1G66800 [NAD(P)-binding Rossmann-fold superfamily protein] -0.426 -0.068
69 264960_at AT1G76930 ATEXT1, EXTENSIN 1, ATEXT4, extensin 4, EXT1, extensin 1, EXT4, extensin 4, ORG5, OBP3-RESPONSIVE GENE 5 -0.417 0.078
70 264958_at AT1G76960 unknown -0.405 0.155
71 245689_at AT5G04120 [Phosphoglycerate mutase family protein] -0.401 -0.052
72 245329_at AT4G14365 XBAT34, XB3 ortholog 4 in Arabidopsis thaliana -0.384 0.201
73 264940_at AT1G60470 AtGolS4, galactinol synthase 4, GolS4, galactinol synthase 4 -0.380 -0.029
74 252136_at AT3G50770 CML41, calmodulin-like 41 -0.380 0.301
75 249203_at AT5G42590 CYP71A16, cytochrome P450, family 71, subfamily A, polypeptide 16, MRO, marneral oxidase -0.380 -0.100
76 263539_at AT2G24850 TAT, TYROSINE AMINOTRANSFERASE, TAT3, tyrosine aminotransferase 3 -0.378 0.263
77 249205_at AT5G42600 MRN1, marneral synthase 1 -0.367 -0.111
78 263208_at AT1G10480 ZFP5, zinc finger protein 5 -0.359 -0.004
79 252417_at AT3G47480 [Calcium-binding EF-hand family protein] -0.339 0.349
80 245976_at AT5G13080 ATWRKY75, ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 75, WRKY75, WRKY DNA-binding protein 75 -0.337 0.306
81 266353_at AT2G01520 MLP328, MLP-like protein 328, ZCE1, (Zusammen-CA)-enhanced 1 -0.332 -0.098
82 252549_at AT3G45860 CRK4, cysteine-rich RLK (RECEPTOR-like protein kinase) 4 -0.330 0.040
83 245265_at AT4G14400 ACD6, ACCELERATED CELL DEATH 6 -0.327 0.002
84 249729_at AT5G24410 PGL4, 6-phosphogluconolactonase 4 -0.312 -0.095
85 256596_at AT3G28540 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.312 0.121
86 251420_at AT3G60490 [Integrase-type DNA-binding superfamily protein] -0.310 0.022
87 260419_at AT1G69730 [Wall-associated kinase family protein] -0.300 -0.032
88 251531_at AT3G58550 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.291 -0.006
89 248725_at AT5G47980 [HXXXD-type acyl-transferase family protein] -0.290 -0.013
90 263783_at AT2G46400 ATWRKY46, WRKY DNA-BINDING PROTEIN 46, WRKY46, WRKY DNA-binding protein 46 -0.279 0.334
91 246405_at AT1G57630 [Toll-Interleukin-Resistance (TIR) domain family protein] -0.274 0.371
92 254242_at AT4G23200 CRK12, cysteine-rich RLK (RECEPTOR-like protein kinase) 12 -0.273 0.229
93 251668_at AT3G57010 [Calcium-dependent phosphotriesterase superfamily protein] -0.271 -0.102
94 257919_at AT3G23250 ATMYB15, MYB DOMAIN PROTEIN 15, ATY19, MYB15, myb domain protein 15 -0.269 0.134
95 260116_at AT1G33960 AIG1, AVRRPT2-INDUCED GENE 1 -0.268 0.505
96 266820_at AT2G44940 [Integrase-type DNA-binding superfamily protein] -0.266 -0.047
97 249895_at AT5G22500 FAR1, fatty acid reductase 1 -0.265 -0.020
98 256012_at AT1G19250 FMO1, flavin-dependent monooxygenase 1 -0.260 0.723
99 267595_at AT2G32990 AtGH9B8, glycosyl hydrolase 9B8, GH9B8, glycosyl hydrolase 9B8 -0.255 -0.109
100 248169_at AT5G54610 ANK, ankyrin, BDA1, bian da 2 (becoming big in Chinese) -0.253 0.068
101 249675_at AT5G35940 [Mannose-binding lectin superfamily protein] -0.252 -0.037
102 253014_at AT4G37940 AGL21, AGAMOUS-like 21 -0.251 -0.072
103 253332_at AT4G33420 [Peroxidase superfamily protein] -0.250 0.065
104 258537_at AT3G04210 [Disease resistance protein (TIR-NBS class)] -0.246 0.038
105 261574_at AT1G01190 CYP78A8, cytochrome P450, family 78, subfamily A, polypeptide 8 -0.242 -0.065
106 250200_at AT5G14130 [Peroxidase superfamily protein] -0.240 -0.048
107 245912_at AT5G19600 SULTR3;5, sulfate transporter 3;5 -0.235 -0.023