4.0:Information of module
expressing C2 Mock
In comparison with Hypoxic prt6 help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0009657 plastid organization BP 7.996e-04
GO:0006996 organelle organization BP 1.276e-03
GO:0006396 RNA processing BP 1.663e-03
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0009851 auxin biosynthetic process BP 4.193e-08
GO:0009683 indoleacetic acid metabolic process BP 4.643e-08
GO:0009684 indoleacetic acid biosynthetic process BP 4.643e-08
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
expressing C2 Mock		 Log2 signal ratio
Hypoxic prt6
1 244931_at ATMG00630 ORF110B 0.241 -0.018
2 255500_at AT4G02390 APP, poly(ADP-ribose) polymerase, PARP2, poly(ADP-ribose) polymerase 2, PP, poly(ADP-ribose) polymerase 0.218 -0.024
3 253166_at AT4G35290 ATGLR3.2, ATGLUR2, GLR3.2, GLUTAMATE RECEPTOR 3.2, GLUR2, glutamate receptor 2 0.216 0.010
4 250322_at AT5G12870 ATMYB46, MYB DOMAIN PROTEIN 46, MYB46, myb domain protein 46 0.209 0.071
5 255530_at AT4G02140 unknown 0.207 0.073
6 267572_at AT2G30660 [ATP-dependent caseinolytic (Clp) protease/crotonase family protein] 0.206 -0.008
7 266689_at AT2G19930 [RNA-dependent RNA polymerase family protein] 0.200 0.112
8 255181_at AT4G08110 [CACTA-like transposase family (Ptta/En/Spm), has a 4.2e-66 P-value blast match to At5g29026.1/8-244 CACTA-like transposase family (Ptta/En/Spm) (CACTA-element) (Arabidopsis thaliana)] 0.197 0.084
9 257402_at AT1G23570 unknown 0.195 0.010
10 244949_at ATMG00150 ORF116 0.192 0.002
11 247903_at AT5G57340 unknown 0.188 -0.085
12 264496_at AT1G27285 [copia-like retrotransposon family, has a 0. P-value blast match to GB:AAC02666 polyprotein (Ty1_Copia-element) (Arabidopsis thaliana)] 0.186 0.056
13 263546_at AT2G21550 [Bifunctional dihydrofolate reductase/thymidylate synthase] 0.183 0.086
14 266038_at AT2G07680 ABCC13, ATP-binding cassette C13, ATMRP11, multidrug resistance-associated protein 11, MRP11, multidrug resistance-associated protein 11 0.182 0.112
15 250227_at AT5G13830 [FtsJ-like methyltransferase family protein] 0.181 0.045
16 250468_at AT5G10120 [Ethylene insensitive 3 family protein] 0.180 -0.125
17 265879_at AT2G42450 [alpha/beta-Hydrolases superfamily protein] 0.180 0.102
18 245581_at AT4G14840 unknown 0.177 0.052
19 267573_at AT2G30670 [NAD(P)-binding Rossmann-fold superfamily protein] 0.177 0.035
20 255640_at AT4G00800 SETH5 0.170 0.049
21 254808_at AT4G12740 [HhH-GPD base excision DNA repair family protein] 0.168 0.065
22 265492_at AT2G15660 AGL95, AGAMOUS-like 95 0.166 0.044
23 265997_at AT2G24250 unknown 0.166 0.053
24 253809_at AT4G28320 AtMAN5, MAN5, endo-beta-mannase 5 0.164 0.020
25 245129_at AT2G45350 CRR4, CHLORORESPIRATORY REDUCTION 4 0.164 0.021
26 260646_at AT1G53340 [Cysteine/Histidine-rich C1 domain family protein] 0.163 0.015
27 249011_at AT5G44670 GALS2, galactan synthase 2 0.160 -0.002
28 266693_at AT2G19800 MIOX2, myo-inositol oxygenase 2 0.158 0.177
29 251147_at AT3G63480 [ATP binding microtubule motor family protein] 0.157 0.090
30 245670_at AT1G28210 ATJ1 0.156 0.031
31 263108_at AT1G65240 [Eukaryotic aspartyl protease family protein] 0.156 0.072
32 254419_at AT4G21490 NDB3, NAD(P)H dehydrogenase B3 0.156 -0.028
33 248082_at AT5G55400 [Actin binding Calponin homology (CH) domain-containing protein] 0.154 -0.058
34 253126_at AT4G36050 [endonuclease/exonuclease/phosphatase family protein] 0.153 0.001
35 250659_at AT5G07050 UMAMIT9, Usually multiple acids move in and out Transporters 9 0.152 0.030
36 251583_at AT3G58590 [Pentatricopeptide repeat (PPR) superfamily protein] 0.152 -0.006
37 263587_at AT2G25340 ATVAMP712, vesicle-associated membrane protein 712, VAMP712, VAMP712, vesicle-associated membrane protein 712 0.149 -0.016
38 256325_at AT3G02330 [Pentatricopeptide repeat (PPR) superfamily protein] 0.147 0.028
39 265634_at AT2G25530 [AFG1-like ATPase family protein] 0.146 0.030
40 248727_at AT5G47990 CYP705A5, cytochrome P450, family 705, subfamily A, polypeptide 5, THAD, THALIAN-DIOL DESATURASE, THAD1, THALIAN-DIOL DESATURASE -0.697 -0.124
41 251625_at AT3G57260 AtBG2, AtPR2, BG2, BETA-1,3-GLUCANASE 2, BGL2, beta-1,3-glucanase 2, PR-2, PATHOGENESIS-RELATED PROTEIN 2, PR2, PATHOGENESIS-RELATED PROTEIN 2 -0.640 -0.031
42 248729_at AT5G48010 AtTHAS1, Arabidopsis thaliana thalianol synthase 1, THAS, THALIANOL SYNTHASE, THAS1, thalianol synthase 1 -0.549 -0.125
43 254828_at AT4G12550 AIR1, Auxin-Induced in Root cultures 1 -0.394 0.013
44 249545_at AT5G38030 [MATE efflux family protein] -0.386 -0.099
45 248676_at AT5G48850 ATSDI1, SULPHUR DEFICIENCY-INDUCED 1 -0.378 -0.461
46 249729_at AT5G24410 PGL4, 6-phosphogluconolactonase 4 -0.364 -0.001
47 263168_at AT1G03020 [Thioredoxin superfamily protein] -0.335 -0.196
48 255252_at AT4G04990 unknown -0.318 -0.118
49 266330_at AT2G01530 MLP329, MLP-like protein 329, ZCE2, (Zusammen-CA)-enhanced 2 -0.314 -0.034
50 263208_at AT1G10480 ZFP5, zinc finger protein 5 -0.311 -0.089
51 250942_at AT5G03350 [Legume lectin family protein] -0.297 -0.351
52 254326_at AT4G22610 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.268 -0.158
53 267595_at AT2G32990 AtGH9B8, glycosyl hydrolase 9B8, GH9B8, glycosyl hydrolase 9B8 -0.268 -0.211
54 255877_at AT2G40460 [Major facilitator superfamily protein] -0.265 -0.155
55 248237_at AT5G53890 AtPSKR2, PSKR2, phytosylfokine-alpha receptor 2 -0.252 0.037
56 248725_at AT5G47980 [HXXXD-type acyl-transferase family protein] -0.246 -0.141
57 266141_at AT2G02120 LCR70, LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 70, PDF2.1 -0.244 0.135
58 252374_at AT3G48100 ARR5, response regulator 5, ATRR2, ARABIDOPSIS THALIANA RESPONSE REGULATOR 2, IBC6, INDUCED BY CYTOKININ 6, RR5, response regulator 5 -0.231 -0.082
59 251284_at AT3G61840 unknown -0.231 -0.045
60 259801_at AT1G72230 [Cupredoxin superfamily protein] -0.231 -0.042
61 249721_at AT5G24655 LSU4, RESPONSE TO LOW SULFUR 4 -0.222 -0.028
62 252202_at AT3G50300 [HXXXD-type acyl-transferase family protein] -0.222 -0.044
63 249009_at AT5G44610 MAP18, microtubule-associated protein 18, PCAP2, PLASMA MEMBRANE ASSOCIATED CA2+-BINDING PROTEIN-2 -0.221 -0.077
64 262260_at AT1G70850 MLP34, MLP-like protein 34 -0.221 -0.026
65 254922_at AT4G11370 RHA1A, RING-H2 finger A1A -0.220 -0.013
66 262560_at AT1G34280 unknown -0.218 0.035
67 267459_at AT2G33850 unknown -0.217 -0.125
68 246687_at AT5G33370 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.214 -0.147
69 256935_at AT3G22570 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.203 -0.088
70 252087_at AT3G52080 chx28, cation/hydrogen exchanger 28 -0.203 0.037
71 247600_at AT5G60890 ATMYB34, ATR1, ALTERED TRYPTOPHAN REGULATION 1, MYB34, myb domain protein 34 -0.202 -0.151
72 249252_at AT5G42010 [Transducin/WD40 repeat-like superfamily protein] -0.201 -0.035
73 261381_at AT1G05460 SDE3, SILENCING DEFECTIVE -0.200 -0.041
74 260276_at AT1G80450 [VQ motif-containing protein] -0.199 -0.089
75 266760_at AT2G46870 NGA1, NGATHA1 -0.197 -0.099
76 251061_at AT5G01830 SAUR21, SMALL AUXIN UP RNA 21 -0.196 0.072
77 254361_at AT4G22212 [Arabidopsis defensin-like protein] -0.196 -0.058