4.0:Information of module
expressing C2 Mock
In comparison with arr-BA-sample help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0009657 plastid organization BP 7.996e-04
GO:0006996 organelle organization BP 1.276e-03
GO:0006396 RNA processing BP 1.663e-03
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0009851 auxin biosynthetic process BP 4.193e-08
GO:0009683 indoleacetic acid metabolic process BP 4.643e-08
GO:0009684 indoleacetic acid biosynthetic process BP 4.643e-08
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
expressing C2 Mock		 Log2 signal ratio
arr-BA-sample
1 244931_at ATMG00630 ORF110B 0.241 0.084
2 255500_at AT4G02390 APP, poly(ADP-ribose) polymerase, PARP2, poly(ADP-ribose) polymerase 2, PP, poly(ADP-ribose) polymerase 0.218 0.104
3 253166_at AT4G35290 ATGLR3.2, ATGLUR2, GLR3.2, GLUTAMATE RECEPTOR 3.2, GLUR2, glutamate receptor 2 0.216 0.029
4 250322_at AT5G12870 ATMYB46, MYB DOMAIN PROTEIN 46, MYB46, myb domain protein 46 0.209 0.094
5 255530_at AT4G02140 unknown 0.207 0.061
6 267572_at AT2G30660 [ATP-dependent caseinolytic (Clp) protease/crotonase family protein] 0.206 0.144
7 266689_at AT2G19930 [RNA-dependent RNA polymerase family protein] 0.200 0.031
8 255181_at AT4G08110 [CACTA-like transposase family (Ptta/En/Spm), has a 4.2e-66 P-value blast match to At5g29026.1/8-244 CACTA-like transposase family (Ptta/En/Spm) (CACTA-element) (Arabidopsis thaliana)] 0.197 -0.054
9 257402_at AT1G23570 unknown 0.195 0.023
10 244949_at ATMG00150 ORF116 0.192 -0.018
11 247903_at AT5G57340 unknown 0.188 -0.026
12 264496_at AT1G27285 [copia-like retrotransposon family, has a 0. P-value blast match to GB:AAC02666 polyprotein (Ty1_Copia-element) (Arabidopsis thaliana)] 0.186 0.004
13 263546_at AT2G21550 [Bifunctional dihydrofolate reductase/thymidylate synthase] 0.183 -0.046
14 266038_at AT2G07680 ABCC13, ATP-binding cassette C13, ATMRP11, multidrug resistance-associated protein 11, MRP11, multidrug resistance-associated protein 11 0.182 0.050
15 250227_at AT5G13830 [FtsJ-like methyltransferase family protein] 0.181 -0.021
16 250468_at AT5G10120 [Ethylene insensitive 3 family protein] 0.180 -0.034
17 265879_at AT2G42450 [alpha/beta-Hydrolases superfamily protein] 0.180 -0.029
18 245581_at AT4G14840 unknown 0.177 0.065
19 267573_at AT2G30670 [NAD(P)-binding Rossmann-fold superfamily protein] 0.177 0.172
20 255640_at AT4G00800 SETH5 0.170 -0.020
21 254808_at AT4G12740 [HhH-GPD base excision DNA repair family protein] 0.168 -0.008
22 265492_at AT2G15660 AGL95, AGAMOUS-like 95 0.166 0.103
23 265997_at AT2G24250 unknown 0.166 0.056
24 253809_at AT4G28320 AtMAN5, MAN5, endo-beta-mannase 5 0.164 0.042
25 245129_at AT2G45350 CRR4, CHLORORESPIRATORY REDUCTION 4 0.164 0.093
26 260646_at AT1G53340 [Cysteine/Histidine-rich C1 domain family protein] 0.163 0.178
27 249011_at AT5G44670 GALS2, galactan synthase 2 0.160 0.129
28 266693_at AT2G19800 MIOX2, myo-inositol oxygenase 2 0.158 0.340
29 251147_at AT3G63480 [ATP binding microtubule motor family protein] 0.157 -0.024
30 245670_at AT1G28210 ATJ1 0.156 0.014
31 263108_at AT1G65240 [Eukaryotic aspartyl protease family protein] 0.156 0.055
32 254419_at AT4G21490 NDB3, NAD(P)H dehydrogenase B3 0.156 0.173
33 248082_at AT5G55400 [Actin binding Calponin homology (CH) domain-containing protein] 0.154 -0.048
34 253126_at AT4G36050 [endonuclease/exonuclease/phosphatase family protein] 0.153 -0.041
35 250659_at AT5G07050 UMAMIT9, Usually multiple acids move in and out Transporters 9 0.152 -0.007
36 251583_at AT3G58590 [Pentatricopeptide repeat (PPR) superfamily protein] 0.152 -0.142
37 263587_at AT2G25340 ATVAMP712, vesicle-associated membrane protein 712, VAMP712, VAMP712, vesicle-associated membrane protein 712 0.149 0.014
38 256325_at AT3G02330 [Pentatricopeptide repeat (PPR) superfamily protein] 0.147 0.099
39 265634_at AT2G25530 [AFG1-like ATPase family protein] 0.146 -0.219
40 248727_at AT5G47990 CYP705A5, cytochrome P450, family 705, subfamily A, polypeptide 5, THAD, THALIAN-DIOL DESATURASE, THAD1, THALIAN-DIOL DESATURASE -0.697 -0.673
41 251625_at AT3G57260 AtBG2, AtPR2, BG2, BETA-1,3-GLUCANASE 2, BGL2, beta-1,3-glucanase 2, PR-2, PATHOGENESIS-RELATED PROTEIN 2, PR2, PATHOGENESIS-RELATED PROTEIN 2 -0.640 0.137
42 248729_at AT5G48010 AtTHAS1, Arabidopsis thaliana thalianol synthase 1, THAS, THALIANOL SYNTHASE, THAS1, thalianol synthase 1 -0.549 -0.653
43 254828_at AT4G12550 AIR1, Auxin-Induced in Root cultures 1 -0.394 -0.305
44 249545_at AT5G38030 [MATE efflux family protein] -0.386 -0.721
45 248676_at AT5G48850 ATSDI1, SULPHUR DEFICIENCY-INDUCED 1 -0.378 0.063
46 249729_at AT5G24410 PGL4, 6-phosphogluconolactonase 4 -0.364 -0.136
47 263168_at AT1G03020 [Thioredoxin superfamily protein] -0.335 -0.125
48 255252_at AT4G04990 unknown -0.318 -0.346
49 266330_at AT2G01530 MLP329, MLP-like protein 329, ZCE2, (Zusammen-CA)-enhanced 2 -0.314 -0.409
50 263208_at AT1G10480 ZFP5, zinc finger protein 5 -0.311 -0.375
51 250942_at AT5G03350 [Legume lectin family protein] -0.297 0.233
52 254326_at AT4G22610 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.268 -0.229
53 267595_at AT2G32990 AtGH9B8, glycosyl hydrolase 9B8, GH9B8, glycosyl hydrolase 9B8 -0.268 -0.180
54 255877_at AT2G40460 [Major facilitator superfamily protein] -0.265 -0.026
55 248237_at AT5G53890 AtPSKR2, PSKR2, phytosylfokine-alpha receptor 2 -0.252 0.003
56 248725_at AT5G47980 [HXXXD-type acyl-transferase family protein] -0.246 -0.815
57 266141_at AT2G02120 LCR70, LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 70, PDF2.1 -0.244 -0.433
58 252374_at AT3G48100 ARR5, response regulator 5, ATRR2, ARABIDOPSIS THALIANA RESPONSE REGULATOR 2, IBC6, INDUCED BY CYTOKININ 6, RR5, response regulator 5 -0.231 -0.596
59 251284_at AT3G61840 unknown -0.231 -0.048
60 259801_at AT1G72230 [Cupredoxin superfamily protein] -0.231 -0.134
61 249721_at AT5G24655 LSU4, RESPONSE TO LOW SULFUR 4 -0.222 0.135
62 252202_at AT3G50300 [HXXXD-type acyl-transferase family protein] -0.222 -0.612
63 249009_at AT5G44610 MAP18, microtubule-associated protein 18, PCAP2, PLASMA MEMBRANE ASSOCIATED CA2+-BINDING PROTEIN-2 -0.221 -0.242
64 262260_at AT1G70850 MLP34, MLP-like protein 34 -0.221 -0.362
65 254922_at AT4G11370 RHA1A, RING-H2 finger A1A -0.220 -0.409
66 262560_at AT1G34280 unknown -0.218 0.032
67 267459_at AT2G33850 unknown -0.217 -0.218
68 246687_at AT5G33370 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.214 -0.162
69 256935_at AT3G22570 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.203 -0.059
70 252087_at AT3G52080 chx28, cation/hydrogen exchanger 28 -0.203 0.125
71 247600_at AT5G60890 ATMYB34, ATR1, ALTERED TRYPTOPHAN REGULATION 1, MYB34, myb domain protein 34 -0.202 -0.240
72 249252_at AT5G42010 [Transducin/WD40 repeat-like superfamily protein] -0.201 -0.162
73 261381_at AT1G05460 SDE3, SILENCING DEFECTIVE -0.200 0.016
74 260276_at AT1G80450 [VQ motif-containing protein] -0.199 0.022
75 266760_at AT2G46870 NGA1, NGATHA1 -0.197 0.150
76 251061_at AT5G01830 SAUR21, SMALL AUXIN UP RNA 21 -0.196 0.257
77 254361_at AT4G22212 [Arabidopsis defensin-like protein] -0.196 -0.232