4.0:Information of module
ago4-1
In comparison with 1 h Light IP RNA help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0002238 response to molecule of fungal origin BP 3.312e-05
GO:0016049 cell growth BP 3.779e-05
GO:0040007 growth BP 1.415e-04
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0034641 cellular nitrogen compound metabolic pro... BP 1.734e-07
GO:0046483 heterocycle metabolic process BP 1.829e-07
GO:0006725 cellular aromatic compound metabolic pro... BP 3.501e-07
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
ago4-1		 Log2 signal ratio
1 h Light IP RNA
1 252549_at AT3G45860 CRK4, cysteine-rich RLK (RECEPTOR-like protein kinase) 4 1.275 -0.117
2 254777_at AT4G12960 AtGILT, GILT, gamma-interferon-responsive lysosomal thiol reductase 1.032 0.022
3 258639_at AT3G07820 [Pectin lyase-like superfamily protein] 0.961 -0.105
4 259719_at AT1G61070 LCR66, low-molecular-weight cysteine-rich 66, PDF2.4, PLANT DEFENSIN 2.4 0.940 -0.055
5 262760_at AT1G10770 [Plant invertase/pectin methylesterase inhibitor superfamily protein] 0.876 0.120
6 258434_at AT3G16770 ATEBP, ethylene-responsive element binding protein, EBP, ethylene-responsive element binding protein, ERF72, ETHYLENE RESPONSE FACTOR 72, RAP2.3, RELATED TO AP2 3 0.862 0.007
7 263161_at AT1G54020 [GDSL-like Lipase/Acylhydrolase superfamily protein] 0.851 -0.051
8 256584_at AT3G28750 unknown 0.719 0.015
9 257473_at AT1G33840 unknown 0.714 -0.048
10 250631_at AT5G07430 [Pectin lyase-like superfamily protein] 0.700 -0.029
11 258498_at AT3G02480 [Late embryogenesis abundant protein (LEA) family protein] 0.682 -0.022
12 252692_at AT3G43960 [Cysteine proteinases superfamily protein] 0.665 0.044
13 265080_at AT1G55570 sks12, SKU5 similar 12 0.645 0.075
14 260888_at AT1G29140 [Pollen Ole e 1 allergen and extensin family protein] 0.613 0.058
15 258670_at AT3G08810 [Galactose oxidase/kelch repeat superfamily protein] 0.612 -0.010
16 252170_at AT3G50480 HR4, homolog of RPW8 4 0.566 -0.143
17 262669_at AT1G62850 [Class I peptide chain release factor] 0.549 -0.006
18 248822_at AT5G47000 [Peroxidase superfamily protein] 0.546 -0.201
19 246841_at AT5G26700 [RmlC-like cupins superfamily protein] 0.540 0.020
20 264166_at AT1G65370 [TRAF-like family protein] 0.534 0.025
21 255515_at AT4G02250 [Plant invertase/pectin methylesterase inhibitor superfamily protein] 0.526 -0.030
22 266201_at AT2G39060 AtSWEET9, SWEET9 0.513 0.001
23 245658_at AT1G28270 AtRALF4, RALFL4, ralf-like 4 0.504 -0.072
24 251511_at AT3G59180 [Protein with RNI-like/FBD-like domains] 0.499 0.048
25 248926_at AT5G45880 [Pollen Ole e 1 allergen and extensin family protein] 0.498 0.051
26 265122_at AT1G62540 FMO GS-OX2, flavin-monooxygenase glucosinolate S-oxygenase 2 0.492 0.032
27 256386_at AT1G66540 [Cytochrome P450 superfamily protein] 0.481 0.106
28 260149_at AT1G52810 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] 0.470 0.063
29 262644_at AT1G62710 BETA-VPE, beta vacuolar processing enzyme, BETAVPE 0.469 -0.162
30 249536_at AT5G38760 [Late embryogenesis abundant protein (LEA) family protein] 0.452 0.023
31 256582_at AT3G28840 unknown 0.445 0.025
32 259269_at AT3G01270 [Pectate lyase family protein] 0.442 0.036
33 257821_at AT3G25170 RALFL26, ralf-like 26 0.440 0.018
34 262122_at AT1G02790 PGA4, polygalacturonase 4 0.420 0.007
35 258209_at AT3G14060 unknown 0.413 -0.025
36 252896_at AT4G39480 CYP96A9, cytochrome P450, family 96, subfamily A, polypeptide 9 0.401 -0.031
37 264363_at AT1G03170 FAF2, FANTASTIC FOUR 2, FTM5, FLORAL TRANSITION AT THE MERISTEM5 0.391 0.112
38 256966_at AT3G13400 sks13, SKU5 similar 13 0.388 -0.049
39 265280_at AT2G28355 LCR5, low-molecular-weight cysteine-rich 5 0.375 0.010
40 258560_at AT3G06020 FAF4, FANTASTIC FOUR 4 0.367 0.099
41 260178_at AT1G70720 [Plant invertase/pectin methylesterase inhibitor superfamily protein] 0.364 -0.049
42 264100_at AT1G78970 ATLUP1, ARABIDOPSIS THALIANA LUPEOL SYNTHASE 1, LUP1, lupeol synthase 1 0.360 -0.043
43 260527_at AT2G47270 UPB1, UPBEAT1 0.358 -0.192
44 252161_at AT3G50580 [LOCATED IN: endomembrane system] 0.347 0.061
45 262668_at AT1G62830 ATLSD1, ARABIDOPSIS LYSINE-SPECIFIC HISTONE DEMETHYLASE, ATSWP1, LDL1, LSD1-like 1, LSD1, LYSINE-SPECIFIC HISTONE DEMETHYLASE, SWP1 0.340 0.057
46 250154_at AT5G15140 [Galactose mutarotase-like superfamily protein] 0.335 0.083
47 266549_at AT2G35150 EXL7, EXORDIUM LIKE 7 0.326 0.054
48 253226_at AT4G35010 BGAL11, beta-galactosidase 11 0.324 0.082
49 248534_at AT5G50030 [Plant invertase/pectin methylesterase inhibitor superfamily protein] 0.316 0.095
50 249048_at AT5G44300 [Dormancy/auxin associated family protein] 0.315 0.017
51 251252_at AT3G62230 DAF1, DUO1-activated F-box 1 0.315 0.036
52 257256_at AT3G21970 unknown 0.315 0.038
53 258348_at AT3G17710 [F-box and associated interaction domains-containing protein] 0.299 -0.016
54 258338_at AT3G16150 ASPGB1, asparaginase B1 0.297 -0.007
55 264151_at AT1G02070 unknown 0.291 0.116
56 255726_at AT1G25530 [Transmembrane amino acid transporter family protein] 0.288 0.019
57 265127_at AT1G55560 sks14, SKU5 similar 14 0.287 -0.029
58 252462_at AT3G47250 unknown -1.259 0.072
59 263909_at AT2G36490 AtROS1, DML1, demeter-like 1, ROS1, REPRESSOR OF SILENCING1 -0.681 -0.177
60 246511_at AT5G15490 UGD3, UDP-glucose dehydrogenase 3 -0.585 -0.011
61 252215_at AT3G50240 KICP-02 -0.548 -0.138
62 267459_at AT2G33850 unknown -0.494 -0.027
63 258191_at AT3G29100 ATVTI13, VTI13, vesicle transport V-snare 13 -0.491 -0.075
64 261544_at AT1G63540 [hydroxyproline-rich glycoprotein family protein] -0.487 0.029
65 245227_s_at AT1G08410 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.477 -0.163
66 259793_at AT1G64380 [Integrase-type DNA-binding superfamily protein] -0.458 0.078
67 267361_at AT2G39920 [HAD superfamily, subfamily IIIB acid phosphatase ] -0.444 0.368
68 252676_at AT3G44280 unknown -0.421 0.080
69 261325_at AT1G44780 unknown -0.402 -0.102
70 251629_at AT3G57410 ATVLN3, VLN3, villin 3 -0.396 -0.003
71 251906_at AT3G53720 ATCHX20, cation/H+ exchanger 20, CHX20, cation/H+ exchanger 20 -0.368 -0.009
72 266314_at AT2G27040 AGO4, ARGONAUTE 4, OCP11, OVEREXPRESSOR OF CATIONIC PEROXIDASE 11 -0.358 -0.016
73 262346_at AT1G63980 [D111/G-patch domain-containing protein] -0.307 0.055
74 258544_at AT3G07040 RPM1, RESISTANCE TO P. SYRINGAE PV MACULICOLA 1, RPS3, RESISTANCE TO PSEUDOMONAS SYRINGAE 3 -0.274 -0.137
75 262124_at AT1G59660 [Nucleoporin autopeptidase] -0.272 -0.136
76 251503_at AT3G59140 ABCC10, ATP-binding cassette C10, ATMRP14, multidrug resistance-associated protein 14, MRP14, multidrug resistance-associated protein 14 -0.269 0.051
77 251278_at AT3G61780 emb1703, embryo defective 1703 -0.266 0.040
78 258341_at AT3G22790 NET1A, Networked 1A -0.256 0.082
79 266727_at AT2G03150 emb1579, embryo defective 1579 -0.254 -0.009
80 262871_at AT1G65010 [INVOLVED IN: flower development] -0.253 -0.033
81 267622_at AT2G39690 unknown -0.253 0.055
82 248377_at AT5G51720 At-NEET, NEET, NEET group protein -0.251 0.078
83 249059_at AT5G44530 [Subtilase family protein] -0.250 0.134
84 259367_at AT1G69070 unknown -0.220 -0.031
85 252268_at AT3G49650 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.220 0.013
86 252691_at AT3G44050 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.217 -0.054
87 260466_at AT1G10900 [Phosphatidylinositol-4-phosphate 5-kinase family protein] -0.214 0.086
88 260974_at AT1G53440 [Leucine-rich repeat transmembrane protein kinase] -0.208 -0.200
89 261762_at AT1G15510 ATECB2, ARABIDOPSIS EARLY CHLOROPLAST BIOGENESIS2, ECB2, EARLY CHLOROPLAST BIOGENESIS2, VAC1, VANILLA CREAM 1 -0.206 0.117
90 257071_at AT3G28180 ATCSLC04, Cellulose-synthase-like C4, ATCSLC4, CSLC04, CSLC04, Cellulose-synthase-like C4, CSLC4, CELLULOSE-SYNTHASE LIKE C4 -0.204 -0.060
91 258389_at AT3G15390 SDE5, silencing defective 5 -0.202 -0.049
92 263831_at AT2G40300 ATFER4, ferritin 4, FER4, ferritin 4 -0.201 -0.031
93 247046_at AT5G66540 unknown -0.197 -0.023
94 260292_at AT1G63680 APG13, ALBINO OR PALE-GREEN 13, ATMURE, MURE, PDE316, PIGMENT DEFECTIVE EMBRYO 316 -0.194 0.085
95 260098_at AT1G73320 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] -0.193 -0.012
96 265197_at AT2G36750 UGT73C1, UDP-glucosyl transferase 73C1 -0.193 0.101
97 259930_at AT1G34355 ATPS1, PARALLEL SPINDLE 1, PS1, PARALLEL SPINDLE 1 -0.190 0.033
98 262859_at AT1G64790 ILA, ILITYHIA -0.189 -0.013
99 256787_at AT3G13790 ATBFRUCT1, ATCWINV1, ARABIDOPSIS THALIANA CELL WALL INVERTASE 1 -0.186 -0.176
100 259082_at AT3G04820 [Pseudouridine synthase family protein] -0.184 0.022
101 254808_at AT4G12740 [HhH-GPD base excision DNA repair family protein] -0.180 0.039
102 257273_at AT3G28030 UVH3, ULTRAVIOLET HYPERSENSITIVE 3, UVR1, UV REPAIR DEFECTIVE 1 -0.179 -0.043
103 264965_at AT1G60560 [SWIM zinc finger family protein] -0.176 -0.001
104 262147_at AT1G52570 PLDALPHA2, phospholipase D alpha 2 -0.175 -0.010
105 256661_at AT3G11964 RRP5, Ribosomal RNA Processing 5 -0.175 -0.067
106 252716_at AT3G43920 ATDCL3, DICER-LIKE 3, DCL3, dicer-like 3 -0.173 0.011
107 266957_at AT2G34640 HMR, HEMERA, PTAC12, plastid transcriptionally active 12, TAC12 -0.172 0.006
108 261048_at AT1G01420 UGT72B3, UDP-glucosyl transferase 72B3 -0.171 0.142
109 258505_at AT3G06530 [ARM repeat superfamily protein] -0.168 0.017
110 264292_at AT1G78790 unknown -0.166 0.059
111 253092_at AT4G37380 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.165 -0.004
112 250050_at AT5G17790 VAR3, VARIEGATED 3 -0.161 0.031
113 257275_at AT3G14450 CID9, CTC-interacting domain 9 -0.160 0.096