4.0:Information of module
Fei-0-30min IAA
In comparison with Shoot submergence 7h help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0009719 response to endogenous stimulus BP 3.087e-62
GO:0010033 response to organic substance BP 1.613e-51
GO:0042221 response to chemical BP 1.335e-44
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0009719 response to endogenous stimulus BP 8.644e-10
GO:1901700 response to oxygen-containing compound BP 1.300e-09
GO:0009725 response to hormone BP 5.267e-09
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
Fei-0-30min IAA		 Log2 signal ratio
Shoot submergence 7h
1 251565_at AT3G58190 ASL16, ASYMMETRIC LEAVES 2-LIKE 16, LBD29, lateral organ boundaries-domain 29 0.960 0.021
2 261766_at AT1G15580 ATAUX2-27, AUX2-27, AUXIN-INDUCIBLE 2-27, IAA5, indole-3-acetic acid inducible 5 0.941 -0.388
3 265806_at AT2G18010 SAUR10, SMALL AUXIN UPREGULATED RNA 10 0.850 -0.173
4 266974_at AT2G39370 MAKR4, MEMBRANE-ASSOCIATED KINASE REGULATOR 4 0.797 0.012
5 259332_at AT3G03830 SAUR28, SMALL AUXIN UP RNA 28 0.789 -0.269
6 259331_at AT3G03840 SAUR27, SMALL AUXIN UP RNA 27 0.726 -0.573
7 254323_at AT4G22620 SAUR34, SMALL AUXIN UPREGULATED RNA 34 0.717 -0.109
8 249383_at AT5G39860 BHLH136, BASIC HELIX-LOOP-HELIX PROTEIN 136, BNQ1, BANQUO 1, PRE1, PACLOBUTRAZOL RESISTANCE1 0.688 -0.866
9 248278_at AT5G52890 [AT hook motif-containing protein] 0.648 0.268
10 249417_at AT5G39670 [Calcium-binding EF-hand family protein] 0.644 0.028
11 265856_at AT2G42430 ASL18, ASYMMETRIC LEAVES2-LIKE 18, LBD16, lateral organ boundaries-domain 16 0.627 0.022
12 257900_at AT3G28420 [Putative membrane lipoprotein] 0.624 -0.391
13 265668_at AT2G32020 [Acyl-CoA N-acyltransferases (NAT) superfamily protein] 0.604 0.152
14 248282_at AT5G52900 MAKR6, MEMBRANE-ASSOCIATED KINASE REGULATOR 6 0.600 0.276
15 266611_at AT2G14960 GH3.1 0.589 0.013
16 248164_at AT5G54490 PBP1, pinoid-binding protein 1 0.556 0.113
17 254685_at AT4G13790 SAUR25, SMALL AUXIN UPREGULATED RNA 25 0.549 0.126
18 247869_at AT5G57520 ATZFP2, ZINC FINGER PROTEIN 2, ZFP2, zinc finger protein 2 0.546 0.070
19 266830_at AT2G22810 ACC4, 1-AMINOCYCLOPROPANE-1-CARBOXYLIC ACID SYNTHASE POLYPEPTIDE, ACS4, 1-aminocyclopropane-1-carboxylate synthase 4, ATACS4 0.545 -0.029
20 253423_at AT4G32280 IAA29, indole-3-acetic acid inducible 29 0.543 0.139
21 245076_at AT2G23170 GH3.3 0.541 0.151
22 248316_at AT5G52670 [Copper transport protein family] 0.535 0.011
23 259787_at AT1G29460 SAUR65, SMALL AUXIN UPREGULATED RNA 65 0.534 -0.301
24 260152_at AT1G52830 IAA6, indole-3-acetic acid 6, SHY1, SHORT HYPOCOTYL 1 0.526 -0.396
25 252970_at AT4G38850 ATSAUR15, ARABIDOPSIS THALIANA SMALL AUXIN UPREGULATED 15, SAUR-AC1, ARABIDOPSIS COLUMBIA SAUR GENE 1, SAUR15, SMALL AUXIN UPREGULATED 15, SAUR_AC1, SMALL AUXIN UP RNA 1 FROM ARABIDOPSIS THALIANA ECOTYPE COLUMBIA 0.515 -0.435
26 258377_at AT3G17690 ATCNGC19, CYCLIC NUCLEOTIDE-GATED CHANNEL 19, CNGC19, cyclic nucleotide gated channel 19 0.507 -0.150
27 247622_at AT5G60350 unknown 0.501 0.063
28 251178_at AT3G63440 ATCKX6, CYTOKININ OXIDASE 6, ATCKX7, CKX6, cytokinin oxidase/dehydrogenase 6 0.494 -0.016
29 267614_at AT2G26710 BAS1, PHYB ACTIVATION TAGGED SUPPRESSOR 1, CYP72B1, CYP734A1 0.479 0.288
30 252765_at AT3G42800 unknown 0.474 0.134
31 254065_at AT4G25420 AT2301, ATGA20OX1, ARABIDOPSIS THALIANA GIBBERELLIN 20-OXIDASE 1, GA20OX1, GA5, GA REQUIRING 5 0.460 -0.485
32 266821_at AT2G44840 ATERF13, ETHYLENE-RESPONSIVE ELEMENT BINDING FACTOR 13, EREBP, ERF13, ethylene-responsive element binding factor 13 0.451 -0.424
33 266832_at AT2G30040 MAPKKK14, mitogen-activated protein kinase kinase kinase 14 0.445 -0.350
34 246401_at AT1G57560 AtMYB50, myb domain protein 50, MYB50, myb domain protein 50 0.442 -0.224
35 248801_at AT5G47370 HAT2 0.438 0.304
36 252131_at AT3G50930 BCS1, cytochrome BC1 synthesis 0.425 -0.416
37 246798_at AT5G26930 GATA23, GATA transcription factor 23 0.422 -0.007
38 263182_at AT1G05575 unknown 0.407 0.286
39 245397_at AT4G14560 AXR5, AUXIN RESISTANT 5, IAA1, indole-3-acetic acid inducible 1 0.406 -0.268
40 254926_at AT4G11280 ACS6, 1-aminocyclopropane-1-carboxylic acid (acc) synthase 6, ATACS6 0.403 -0.569
41 248789_at AT5G47440 unknown 0.395 -0.129
42 253179_at AT4G35200 unknown 0.395 0.081
43 249306_at AT5G41400 [RING/U-box superfamily protein] 0.392 -0.620
44 259784_at AT1G29450 SAUR64, SMALL AUXIN UPREGULATED RNA 64 0.388 -0.449
45 261475_at AT1G14550 [Peroxidase superfamily protein] 0.385 0.223
46 256190_at AT1G30100 ATNCED5, NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 5, NCED5, nine-cis-epoxycarotenoid dioxygenase 5 0.383 0.003
47 259773_at AT1G29500 SAUR66, SMALL AUXIN UPREGULATED RNA 66 0.380 -0.442
48 259027_at AT3G09280 unknown 0.377 0.033
49 265144_at AT1G51170 AGC2-3, AGC2 kinase 3, UCN, UNICORN 0.373 -0.297
50 261476_at AT1G14480 [Ankyrin repeat family protein] 0.370 0.058
51 247252_at AT5G64770 CLEL 9, CLE-like 9, GLV2, GOLVEN 2, RGF9, root meristem growth factor 9 0.364 -0.666
52 261470_at AT1G28370 ATERF11, ERF DOMAIN PROTEIN 11, ERF11, ERF domain protein 11 0.363 -0.206
53 248448_at AT5G51190 [Integrase-type DNA-binding superfamily protein] 0.354 -0.048
54 261917_at AT1G65920 [Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain] 0.350 -0.302
55 253791_at AT4G28640 IAA11, indole-3-acetic acid inducible 11 0.341 0.310
56 252965_at AT4G38860 SAUR16, SMALL AUXIN UPREGULATED RNA 16 0.335 -0.463
57 247215_at AT5G64905 PROPEP3, elicitor peptide 3 precursor 0.330 0.110
58 253103_at AT4G36110 SAUR9, SMALL AUXIN UPREGULATED RNA 9 0.330 -0.240
59 253066_at AT4G37770 ACS8, 1-amino-cyclopropane-1-carboxylate synthase 8 0.320 0.339
60 265725_at AT2G32030 [Acyl-CoA N-acyltransferases (NAT) superfamily protein] 0.318 0.088
61 251774_at AT3G55840 [Hs1pro-1 protein] 0.316 0.203
62 245108_at AT2G41510 ATCKX1, CYTOKININ OXIDASE/DEHYDROGENASE 1, CKX1, cytokinin oxidase/dehydrogenase 1 0.316 0.139
63 255074_at AT4G09100 [RING/U-box superfamily protein] 0.316 -0.043
64 254120_at AT4G24570 DIC2, dicarboxylate carrier 2 0.312 -0.343
65 255807_at AT4G10270 [Wound-responsive family protein] -0.617 0.877
66 258930_at AT3G10040 [sequence-specific DNA binding transcription factors] -0.558 0.617
67 265387_at AT2G20670 unknown -0.537 0.561
68 261567_at AT1G33055 unknown -0.473 1.016
69 258487_at AT3G02550 LBD41, LOB domain-containing protein 41 -0.468 0.794
70 267238_at AT2G44130 KMD3, KISS ME DEADLY 3 -0.467 0.458
71 249467_at AT5G39610 ANAC092, Arabidopsis NAC domain containing protein 92, ATNAC2, NAC domain containing protein 2, ATNAC6, NAC domain containing protein 6, NAC2, NAC domain containing protein 2, NAC6, NAC domain containing protein 6, ORE1, ORESARA 1 -0.399 1.273
72 252367_at AT3G48360 ATBT2, BT2, BTB and TAZ domain protein 2 -0.375 1.375
73 254954_at AT4G10910 unknown -0.359 0.717
74 256914_at AT3G23880 [F-box and associated interaction domains-containing protein] -0.356 0.234
75 248676_at AT5G48850 ATSDI1, SULPHUR DEFICIENCY-INDUCED 1 -0.347 -0.330
76 263970_at AT2G42850 CYP718, cytochrome P450, family 718 -0.340 0.356
77 254200_at AT4G24110 unknown -0.327 0.659
78 256300_at AT1G69490 ANAC029, Arabidopsis NAC domain containing protein 29, ATNAP, NAC-LIKE, ACTIVATED BY AP3/PI, NAP, NAC-like, activated by AP3/PI -0.311 0.841
79 247991_at AT5G56320 ATEXP14, ATEXPA14, expansin A14, ATHEXP ALPHA 1.5, EXP14, EXPANSIN 14, EXPA14, expansin A14 -0.299 -0.217
80 255742_at AT1G25560 AtTEM1, EDF1, ETHYLENE RESPONSE DNA BINDING FACTOR 1, TEM1, TEMPRANILLO 1 -0.289 0.829
81 252269_at AT3G49580 LSU1, RESPONSE TO LOW SULFUR 1 -0.289 -0.426
82 263208_at AT1G10480 ZFP5, zinc finger protein 5 -0.277 0.198
83 262986_at AT1G23390 [Kelch repeat-containing F-box family protein] -0.269 0.264
84 266745_at AT2G02950 PKS1, phytochrome kinase substrate 1 -0.265 0.331
85 265573_at AT2G28200 [C2H2-type zinc finger family protein] -0.257 0.526
86 259364_at AT1G13260 EDF4, ETHYLENE RESPONSE DNA BINDING FACTOR 4, RAV1, related to ABI3/VP1 1 -0.255 0.362
87 251443_at AT3G59940 KFB50, Kelch repeat F-box 50, KMD4, KISS ME DEADLY 4 -0.254 0.321
88 258395_at AT3G15500 ANAC055, NAC domain containing protein 55, ATNAC3, NAC domain containing protein 3, NAC055, NAC domain containing protein 55, NAC3, NAC domain containing protein 3 -0.248 1.096
89 253872_at AT4G27410 ANAC072, Arabidopsis NAC domain containing protein 72, RD26, RESPONSIVE TO DESICCATION 26 -0.247 0.293
90 253814_at AT4G28290 unknown -0.242 -0.132
91 246854_at AT5G26200 [Mitochondrial substrate carrier family protein] -0.240 -0.152
92 264379_at AT2G25200 unknown -0.240 0.348
93 250472_at AT5G10210 unknown -0.237 0.048
94 257615_at AT3G26510 [Octicosapeptide/Phox/Bem1p family protein] -0.223 0.405
95 264339_at AT1G70290 ATTPS8, ATTPSC, TPS8, trehalose-6-phosphatase synthase S8 -0.223 0.446
96 266828_at AT2G22930 [UDP-Glycosyltransferase superfamily protein] -0.219 -0.164
97 247754_at AT5G59080 unknown -0.218 0.175
98 256789_at AT3G13672 SINA2 -0.218 0.155
99 264788_at AT2G17880 DJC24, DNA J protein C24 -0.218 1.006
100 267591_at AT2G39705 DVL11, DEVIL 11, RTFL8, ROTUNDIFOLIA like 8 -0.212 0.621
101 250173_at AT5G14340 AtMYB40, myb domain protein 40, MYB40, myb domain protein 40 -0.208 -0.095
102 260266_at AT1G68520 BBX14, B-box domain protein 14 -0.208 0.038
103 262170_at AT1G74940 unknown -0.208 0.304
104 261265_at AT1G26800 [RING/U-box superfamily protein] -0.207 0.322
105 263829_at AT2G40435 unknown -0.206 -1.209
106 262863_at AT1G64910 [UDP-Glycosyltransferase superfamily protein] -0.201 -0.049
107 247585_at AT5G60680 unknown -0.200 0.302
108 256098_at AT1G13700 PGL1, 6-phosphogluconolactonase 1 -0.197 0.657
109 251072_at AT5G01740 [Nuclear transport factor 2 (NTF2) family protein] -0.197 0.409
110 247540_at AT5G61590 [Integrase-type DNA-binding superfamily protein] -0.191 0.722
111 258059_at AT3G29035 ANAC059, Arabidopsis NAC domain containing protein 59, ATNAC3, NAC domain containing protein 3, NAC3, NAC domain containing protein 3, ORS1, ORE1 SISTER1 -0.186 0.601
112 263632_at AT2G04795 unknown -0.183 0.127
113 260770_at AT1G49200 [RING/U-box superfamily protein] -0.180 0.454
114 259502_at AT1G15670 KFB01, Kelch repeat F-box 1, KMD2, KISS ME DEADLY 2 -0.179 0.913
115 265125_at AT1G55410 [pseudogene] -0.178 0.000
116 260753_at AT1G49230 AtATL78, ATL78, Arabidopsis T?xicos en Levadura 78 -0.177 0.475
117 252534_at AT3G46130 ATMYB48, myb domain protein 48, ATMYB48-1, ATMYB48-2, ATMYB48-3, MYB48, myb domain protein 48 -0.177 -0.687
118 251132_at AT5G01200 [Duplicated homeodomain-like superfamily protein] -0.176 0.111
119 251420_at AT3G60490 [Integrase-type DNA-binding superfamily protein] -0.173 0.432
120 265584_at AT2G20180 PIF1, PHY-INTERACTING FACTOR 1, PIL5, phytochrome interacting factor 3-like 5 -0.172 -0.251
121 249384_at AT5G39890 unknown -0.171 0.545
122 247867_at AT5G57630 CIPK21, CBL-interacting protein kinase 21, SnRK3.4, SNF1-RELATED PROTEIN KINASE 3.4 -0.165 0.670
123 260037_at AT1G68840 AtRAV2, EDF2, ETHYLENE RESPONSE DNA BINDING FACTOR 2, RAP2.8, RELATED TO AP2 8, RAV2, related to ABI3/VP1 2, TEM2, TEMPRANILLO 2 -0.165 0.456
124 250103_at AT5G16600 AtMYB43, myb domain protein 43, MYB43, myb domain protein 43 -0.165 0.005
125 258225_at AT3G15630 unknown -0.164 1.057
126 259365_at AT1G13300 HRS1, HYPERSENSITIVITY TO LOW PI-ELICITED PRIMARY ROOT SHORTENING 1 -0.162 0.113
127 252859_at AT4G39780 [Integrase-type DNA-binding superfamily protein] -0.160 0.384
128 246844_at AT5G26660 ATMYB86, myb domain protein 86, MYB86, myb domain protein 86 -0.160 -0.137