4.0:Information of module
Fei-0-30min IAA
In comparison with 4d red light grown hmr-5 seedlings help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0009719 response to endogenous stimulus BP 3.087e-62
GO:0010033 response to organic substance BP 1.613e-51
GO:0042221 response to chemical BP 1.335e-44
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0009719 response to endogenous stimulus BP 8.644e-10
GO:1901700 response to oxygen-containing compound BP 1.300e-09
GO:0009725 response to hormone BP 5.267e-09
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
Fei-0-30min IAA		 Log2 signal ratio
4d red light grown hmr-5 seedlings
1 251565_at AT3G58190 ASL16, ASYMMETRIC LEAVES 2-LIKE 16, LBD29, lateral organ boundaries-domain 29 0.960 -0.019
2 261766_at AT1G15580 ATAUX2-27, AUX2-27, AUXIN-INDUCIBLE 2-27, IAA5, indole-3-acetic acid inducible 5 0.941 -0.015
3 265806_at AT2G18010 SAUR10, SMALL AUXIN UPREGULATED RNA 10 0.850 -0.074
4 266974_at AT2G39370 MAKR4, MEMBRANE-ASSOCIATED KINASE REGULATOR 4 0.797 0.094
5 259332_at AT3G03830 SAUR28, SMALL AUXIN UP RNA 28 0.789 -0.056
6 259331_at AT3G03840 SAUR27, SMALL AUXIN UP RNA 27 0.726 -0.483
7 254323_at AT4G22620 SAUR34, SMALL AUXIN UPREGULATED RNA 34 0.717 0.061
8 249383_at AT5G39860 BHLH136, BASIC HELIX-LOOP-HELIX PROTEIN 136, BNQ1, BANQUO 1, PRE1, PACLOBUTRAZOL RESISTANCE1 0.688 -0.286
9 248278_at AT5G52890 [AT hook motif-containing protein] 0.648 0.081
10 249417_at AT5G39670 [Calcium-binding EF-hand family protein] 0.644 0.070
11 265856_at AT2G42430 ASL18, ASYMMETRIC LEAVES2-LIKE 18, LBD16, lateral organ boundaries-domain 16 0.627 0.178
12 257900_at AT3G28420 [Putative membrane lipoprotein] 0.624 -0.156
13 265668_at AT2G32020 [Acyl-CoA N-acyltransferases (NAT) superfamily protein] 0.604 0.211
14 248282_at AT5G52900 MAKR6, MEMBRANE-ASSOCIATED KINASE REGULATOR 6 0.600 -0.096
15 266611_at AT2G14960 GH3.1 0.589 0.052
16 248164_at AT5G54490 PBP1, pinoid-binding protein 1 0.556 -0.045
17 254685_at AT4G13790 SAUR25, SMALL AUXIN UPREGULATED RNA 25 0.549 -0.035
18 247869_at AT5G57520 ATZFP2, ZINC FINGER PROTEIN 2, ZFP2, zinc finger protein 2 0.546 0.037
19 266830_at AT2G22810 ACC4, 1-AMINOCYCLOPROPANE-1-CARBOXYLIC ACID SYNTHASE POLYPEPTIDE, ACS4, 1-aminocyclopropane-1-carboxylate synthase 4, ATACS4 0.545 -0.039
20 253423_at AT4G32280 IAA29, indole-3-acetic acid inducible 29 0.543 -0.536
21 245076_at AT2G23170 GH3.3 0.541 0.183
22 248316_at AT5G52670 [Copper transport protein family] 0.535 0.033
23 259787_at AT1G29460 SAUR65, SMALL AUXIN UPREGULATED RNA 65 0.534 -0.168
24 260152_at AT1G52830 IAA6, indole-3-acetic acid 6, SHY1, SHORT HYPOCOTYL 1 0.526 -0.249
25 252970_at AT4G38850 ATSAUR15, ARABIDOPSIS THALIANA SMALL AUXIN UPREGULATED 15, SAUR-AC1, ARABIDOPSIS COLUMBIA SAUR GENE 1, SAUR15, SMALL AUXIN UPREGULATED 15, SAUR_AC1, SMALL AUXIN UP RNA 1 FROM ARABIDOPSIS THALIANA ECOTYPE COLUMBIA 0.515 -0.178
26 258377_at AT3G17690 ATCNGC19, CYCLIC NUCLEOTIDE-GATED CHANNEL 19, CNGC19, cyclic nucleotide gated channel 19 0.507 0.022
27 247622_at AT5G60350 unknown 0.501 0.207
28 251178_at AT3G63440 ATCKX6, CYTOKININ OXIDASE 6, ATCKX7, CKX6, cytokinin oxidase/dehydrogenase 6 0.494 -0.037
29 267614_at AT2G26710 BAS1, PHYB ACTIVATION TAGGED SUPPRESSOR 1, CYP72B1, CYP734A1 0.479 0.078
30 252765_at AT3G42800 unknown 0.474 -0.222
31 254065_at AT4G25420 AT2301, ATGA20OX1, ARABIDOPSIS THALIANA GIBBERELLIN 20-OXIDASE 1, GA20OX1, GA5, GA REQUIRING 5 0.460 -0.091
32 266821_at AT2G44840 ATERF13, ETHYLENE-RESPONSIVE ELEMENT BINDING FACTOR 13, EREBP, ERF13, ethylene-responsive element binding factor 13 0.451 0.012
33 266832_at AT2G30040 MAPKKK14, mitogen-activated protein kinase kinase kinase 14 0.445 0.168
34 246401_at AT1G57560 AtMYB50, myb domain protein 50, MYB50, myb domain protein 50 0.442 -0.079
35 248801_at AT5G47370 HAT2 0.438 -0.202
36 252131_at AT3G50930 BCS1, cytochrome BC1 synthesis 0.425 0.076
37 246798_at AT5G26930 GATA23, GATA transcription factor 23 0.422 0.028
38 263182_at AT1G05575 unknown 0.407 0.209
39 245397_at AT4G14560 AXR5, AUXIN RESISTANT 5, IAA1, indole-3-acetic acid inducible 1 0.406 -0.034
40 254926_at AT4G11280 ACS6, 1-aminocyclopropane-1-carboxylic acid (acc) synthase 6, ATACS6 0.403 -0.123
41 248789_at AT5G47440 unknown 0.395 -0.202
42 253179_at AT4G35200 unknown 0.395 0.010
43 249306_at AT5G41400 [RING/U-box superfamily protein] 0.392 -0.099
44 259784_at AT1G29450 SAUR64, SMALL AUXIN UPREGULATED RNA 64 0.388 -0.292
45 261475_at AT1G14550 [Peroxidase superfamily protein] 0.385 0.075
46 256190_at AT1G30100 ATNCED5, NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 5, NCED5, nine-cis-epoxycarotenoid dioxygenase 5 0.383 0.034
47 259773_at AT1G29500 SAUR66, SMALL AUXIN UPREGULATED RNA 66 0.380 -0.491
48 259027_at AT3G09280 unknown 0.377 0.092
49 265144_at AT1G51170 AGC2-3, AGC2 kinase 3, UCN, UNICORN 0.373 0.058
50 261476_at AT1G14480 [Ankyrin repeat family protein] 0.370 -0.008
51 247252_at AT5G64770 CLEL 9, CLE-like 9, GLV2, GOLVEN 2, RGF9, root meristem growth factor 9 0.364 -0.315
52 261470_at AT1G28370 ATERF11, ERF DOMAIN PROTEIN 11, ERF11, ERF domain protein 11 0.363 0.072
53 248448_at AT5G51190 [Integrase-type DNA-binding superfamily protein] 0.354 0.021
54 261917_at AT1G65920 [Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain] 0.350 -0.205
55 253791_at AT4G28640 IAA11, indole-3-acetic acid inducible 11 0.341 0.014
56 252965_at AT4G38860 SAUR16, SMALL AUXIN UPREGULATED RNA 16 0.335 -0.360
57 247215_at AT5G64905 PROPEP3, elicitor peptide 3 precursor 0.330 0.076
58 253103_at AT4G36110 SAUR9, SMALL AUXIN UPREGULATED RNA 9 0.330 -0.036
59 253066_at AT4G37770 ACS8, 1-amino-cyclopropane-1-carboxylate synthase 8 0.320 -0.250
60 265725_at AT2G32030 [Acyl-CoA N-acyltransferases (NAT) superfamily protein] 0.318 0.127
61 251774_at AT3G55840 [Hs1pro-1 protein] 0.316 0.042
62 245108_at AT2G41510 ATCKX1, CYTOKININ OXIDASE/DEHYDROGENASE 1, CKX1, cytokinin oxidase/dehydrogenase 1 0.316 0.043
63 255074_at AT4G09100 [RING/U-box superfamily protein] 0.316 0.080
64 254120_at AT4G24570 DIC2, dicarboxylate carrier 2 0.312 0.111
65 255807_at AT4G10270 [Wound-responsive family protein] -0.617 0.066
66 258930_at AT3G10040 [sequence-specific DNA binding transcription factors] -0.558 0.063
67 265387_at AT2G20670 unknown -0.537 0.177
68 261567_at AT1G33055 unknown -0.473 0.265
69 258487_at AT3G02550 LBD41, LOB domain-containing protein 41 -0.468 0.438
70 267238_at AT2G44130 KMD3, KISS ME DEADLY 3 -0.467 0.213
71 249467_at AT5G39610 ANAC092, Arabidopsis NAC domain containing protein 92, ATNAC2, NAC domain containing protein 2, ATNAC6, NAC domain containing protein 6, NAC2, NAC domain containing protein 2, NAC6, NAC domain containing protein 6, ORE1, ORESARA 1 -0.399 0.494
72 252367_at AT3G48360 ATBT2, BT2, BTB and TAZ domain protein 2 -0.375 0.112
73 254954_at AT4G10910 unknown -0.359 0.276
74 256914_at AT3G23880 [F-box and associated interaction domains-containing protein] -0.356 0.240
75 248676_at AT5G48850 ATSDI1, SULPHUR DEFICIENCY-INDUCED 1 -0.347 0.124
76 263970_at AT2G42850 CYP718, cytochrome P450, family 718 -0.340 -0.127
77 254200_at AT4G24110 unknown -0.327 0.306
78 256300_at AT1G69490 ANAC029, Arabidopsis NAC domain containing protein 29, ATNAP, NAC-LIKE, ACTIVATED BY AP3/PI, NAP, NAC-like, activated by AP3/PI -0.311 0.348
79 247991_at AT5G56320 ATEXP14, ATEXPA14, expansin A14, ATHEXP ALPHA 1.5, EXP14, EXPANSIN 14, EXPA14, expansin A14 -0.299 -0.044
80 255742_at AT1G25560 AtTEM1, EDF1, ETHYLENE RESPONSE DNA BINDING FACTOR 1, TEM1, TEMPRANILLO 1 -0.289 0.204
81 252269_at AT3G49580 LSU1, RESPONSE TO LOW SULFUR 1 -0.289 0.042
82 263208_at AT1G10480 ZFP5, zinc finger protein 5 -0.277 0.234
83 262986_at AT1G23390 [Kelch repeat-containing F-box family protein] -0.269 0.139
84 266745_at AT2G02950 PKS1, phytochrome kinase substrate 1 -0.265 0.151
85 265573_at AT2G28200 [C2H2-type zinc finger family protein] -0.257 0.171
86 259364_at AT1G13260 EDF4, ETHYLENE RESPONSE DNA BINDING FACTOR 4, RAV1, related to ABI3/VP1 1 -0.255 0.221
87 251443_at AT3G59940 KFB50, Kelch repeat F-box 50, KMD4, KISS ME DEADLY 4 -0.254 0.175
88 258395_at AT3G15500 ANAC055, NAC domain containing protein 55, ATNAC3, NAC domain containing protein 3, NAC055, NAC domain containing protein 55, NAC3, NAC domain containing protein 3 -0.248 0.589
89 253872_at AT4G27410 ANAC072, Arabidopsis NAC domain containing protein 72, RD26, RESPONSIVE TO DESICCATION 26 -0.247 0.206
90 253814_at AT4G28290 unknown -0.242 0.148
91 246854_at AT5G26200 [Mitochondrial substrate carrier family protein] -0.240 -0.120
92 264379_at AT2G25200 unknown -0.240 0.306
93 250472_at AT5G10210 unknown -0.237 0.168
94 257615_at AT3G26510 [Octicosapeptide/Phox/Bem1p family protein] -0.223 0.226
95 264339_at AT1G70290 ATTPS8, ATTPSC, TPS8, trehalose-6-phosphatase synthase S8 -0.223 0.198
96 266828_at AT2G22930 [UDP-Glycosyltransferase superfamily protein] -0.219 -0.013
97 247754_at AT5G59080 unknown -0.218 -0.034
98 256789_at AT3G13672 SINA2 -0.218 0.117
99 264788_at AT2G17880 DJC24, DNA J protein C24 -0.218 0.320
100 267591_at AT2G39705 DVL11, DEVIL 11, RTFL8, ROTUNDIFOLIA like 8 -0.212 0.216
101 250173_at AT5G14340 AtMYB40, myb domain protein 40, MYB40, myb domain protein 40 -0.208 -0.070
102 260266_at AT1G68520 BBX14, B-box domain protein 14 -0.208 0.022
103 262170_at AT1G74940 unknown -0.208 0.079
104 261265_at AT1G26800 [RING/U-box superfamily protein] -0.207 0.129
105 263829_at AT2G40435 unknown -0.206 -0.411
106 262863_at AT1G64910 [UDP-Glycosyltransferase superfamily protein] -0.201 0.056
107 247585_at AT5G60680 unknown -0.200 0.125
108 256098_at AT1G13700 PGL1, 6-phosphogluconolactonase 1 -0.197 0.199
109 251072_at AT5G01740 [Nuclear transport factor 2 (NTF2) family protein] -0.197 -0.038
110 247540_at AT5G61590 [Integrase-type DNA-binding superfamily protein] -0.191 0.174
111 258059_at AT3G29035 ANAC059, Arabidopsis NAC domain containing protein 59, ATNAC3, NAC domain containing protein 3, NAC3, NAC domain containing protein 3, ORS1, ORE1 SISTER1 -0.186 0.116
112 263632_at AT2G04795 unknown -0.183 0.244
113 260770_at AT1G49200 [RING/U-box superfamily protein] -0.180 -0.138
114 259502_at AT1G15670 KFB01, Kelch repeat F-box 1, KMD2, KISS ME DEADLY 2 -0.179 0.212
115 265125_at AT1G55410 [pseudogene] -0.178 0.025
116 260753_at AT1G49230 AtATL78, ATL78, Arabidopsis T?xicos en Levadura 78 -0.177 -0.197
117 252534_at AT3G46130 ATMYB48, myb domain protein 48, ATMYB48-1, ATMYB48-2, ATMYB48-3, MYB48, myb domain protein 48 -0.177 0.208
118 251132_at AT5G01200 [Duplicated homeodomain-like superfamily protein] -0.176 0.042
119 251420_at AT3G60490 [Integrase-type DNA-binding superfamily protein] -0.173 0.221
120 265584_at AT2G20180 PIF1, PHY-INTERACTING FACTOR 1, PIL5, phytochrome interacting factor 3-like 5 -0.172 -0.032
121 249384_at AT5G39890 unknown -0.171 0.145
122 247867_at AT5G57630 CIPK21, CBL-interacting protein kinase 21, SnRK3.4, SNF1-RELATED PROTEIN KINASE 3.4 -0.165 0.433
123 260037_at AT1G68840 AtRAV2, EDF2, ETHYLENE RESPONSE DNA BINDING FACTOR 2, RAP2.8, RELATED TO AP2 8, RAV2, related to ABI3/VP1 2, TEM2, TEMPRANILLO 2 -0.165 0.084
124 250103_at AT5G16600 AtMYB43, myb domain protein 43, MYB43, myb domain protein 43 -0.165 -0.293
125 258225_at AT3G15630 unknown -0.164 0.198
126 259365_at AT1G13300 HRS1, HYPERSENSITIVITY TO LOW PI-ELICITED PRIMARY ROOT SHORTENING 1 -0.162 -0.054
127 252859_at AT4G39780 [Integrase-type DNA-binding superfamily protein] -0.160 0.302
128 246844_at AT5G26660 ATMYB86, myb domain protein 86, MYB86, myb domain protein 86 -0.160 -0.010