4.0:Information of module
ein2-PsmES4326-24hpi
In comparison with Red/FR Light45min help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0019682 glyceraldehyde-3-phosphate metabolic pro... BP 8.659e-29
GO:0006739 NADP metabolic process BP 3.944e-27
GO:0019362 pyridine nucleotide metabolic process BP 8.613e-27
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0010033 response to organic substance BP 1.341e-16
GO:0042221 response to chemical BP 1.586e-16
GO:0009723 response to ethylene BP 1.606e-15
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
ein2-PsmES4326-24hpi		 Log2 signal ratio
Red/FR Light45min
1 248321_at AT5G52740 [Copper transport protein family] 0.714 0.014
2 265111_at AT1G62510 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] 0.605 0.044
3 264611_at AT1G04680 [Pectin lyase-like superfamily protein] 0.454 -0.002
4 263549_at AT2G21650 ATRL2, ARABIDOPSIS RAD-LIKE 2, MEE3, MATERNAL EFFECT EMBRYO ARREST 3, RSM1, RADIALIS-LIKE SANT/MYB 1 0.388 -0.059
5 261135_at AT1G19610 LCR78, LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 78, PDF1.4 0.377 0.031
6 263664_at AT1G04250 AXR3, AUXIN RESISTANT 3, IAA17, indole-3-acetic acid inducible 17 0.372 0.002
7 252681_at AT3G44350 anac061, NAC domain containing protein 61, NAC061, NAC domain containing protein 61 0.370 -0.002
8 246439_at AT5G17600 [RING/U-box superfamily protein] 0.368 0.016
9 258851_at AT3G03190 ATGSTF11, glutathione S-transferase F11, ATGSTF6, ARABIDOPSIS GLUTATHIONE-S-TRANSFERASE 6, GSTF11, glutathione S-transferase F11 0.361 -0.084
10 252309_at AT3G49340 [Cysteine proteinases superfamily protein] 0.355 -0.028
11 260152_at AT1G52830 IAA6, indole-3-acetic acid 6, SHY1, SHORT HYPOCOTYL 1 0.352 -0.013
12 245262_at AT4G16563 [Eukaryotic aspartyl protease family protein] 0.327 -0.043
13 267535_at AT2G41940 ZFP8, zinc finger protein 8 0.317 -0.013
14 254975_at AT4G10500 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] 0.315 0.023
15 259854_at AT1G72200 [RING/U-box superfamily protein] 0.311 0.013
16 251986_at AT3G53310 [AP2/B3-like transcriptional factor family protein] 0.310 -0.023
17 247210_at AT5G65020 ANNAT2, annexin 2, AtANN2 0.291 0.003
18 266393_at AT2G41260 ATM17, M17 0.286 0.112
19 255438_at AT4G03070 AOP, AOP1, AOP1.1 0.284 -0.006
20 245341_at AT4G16447 unknown 0.276 0.037
21 247467_at AT5G62130 [Per1-like family protein] 0.269 -0.005
22 256525_at AT1G66180 [Eukaryotic aspartyl protease family protein] 0.264 -0.001
23 262813_at AT1G11670 [MATE efflux family protein] 0.256 0.006
24 264689_at AT1G09900 [Pentatricopeptide repeat (PPR-like) superfamily protein] 0.250 0.057
25 250261_at AT5G13400 [Major facilitator superfamily protein] 0.250 -0.008
26 265028_at AT1G24530 [Transducin/WD40 repeat-like superfamily protein] 0.246 0.015
27 250445_at AT5G10760 [Eukaryotic aspartyl protease family protein] 0.246 -0.052
28 254145_at AT4G24700 unknown 0.244 -0.016
29 248118_at AT5G55050 [GDSL-like Lipase/Acylhydrolase superfamily protein] 0.243 -0.016
30 252624_at AT3G44735 ATPSK3, PHYTOSULFOKINE 3 PRECURSOR, PSK1, PSK3, PHYTOSULFOKINE 3 PRECURSOR 0.238 -0.015
31 266421_at AT2G38540 ATLTP1, ARABIDOPSIS THALIANA LIPID TRANSFER PROTEIN 1, LP1, lipid transfer protein 1, LTP1, LIPID TRANSFER PROTEIN 1 0.234 0.062
32 246313_at AT1G31920 [Tetratricopeptide repeat (TPR)-like superfamily protein] 0.229 -0.031
33 252929_at AT4G38970 AtFBA2, FBA2, fructose-bisphosphate aldolase 2 0.228 -0.010
34 250884_at AT5G03940 54CP, 54 CHLOROPLAST PROTEIN, CPSRP54, chloroplast signal recognition particle 54 kDa subunit, FFC, FIFTY-FOUR CHLOROPLAST HOMOLOGUE, SRP54CP, SIGNAL RECOGNITION PARTICLE 54 KDA SUBUNIT CHLOROPLAST PROTEIN 0.225 0.033
35 257140_at AT3G28910 ATMYB30, MYB30, myb domain protein 30 0.224 0.008
36 263467_at AT2G31730 [basic helix-loop-helix (bHLH) DNA-binding superfamily protein] 0.220 0.003
37 256310_at AT1G30360 ERD4, early-responsive to dehydration 4 0.213 -0.008
38 249932_at AT5G22390 unknown 0.211 0.007
39 259258_at AT3G07670 [Rubisco methyltransferase family protein] 0.209 -0.049
40 246701_at AT5G28020 ATCYSD2, CYSTEINE SYNTHASE D2, CYSD2, cysteine synthase D2 0.207 -0.003
41 260014_at AT1G68010 ATHPR1, HPR, hydroxypyruvate reductase 0.205 -0.028
42 266022_at AT2G05920 [Subtilase family protein] 0.205 -0.012
43 264078_at AT2G28470 BGAL8, beta-galactosidase 8 0.202 0.019
44 266357_at AT2G32290 BAM6, beta-amylase 6, BMY5, BETA-AMYLASE 5 0.201 -0.002
45 258357_at AT3G14350 SRF7, STRUBBELIG-receptor family 7 0.200 0.018
46 262086_at AT1G56050 [GTP-binding protein-related] 0.200 -0.003
47 250300_at AT5G11890 EMB3135, EMBRYO DEFECTIVE 3135 0.197 0.006
48 247040_at AT5G67150 [HXXXD-type acyl-transferase family protein] 0.196 0.036
49 261594_at AT1G33240 AT-GTL1, GT2-LIKE 1, ATGTL1, GTL1, GT-2-like 1 0.195 0.005
50 264057_at AT2G28550 RAP2.7, related to AP2.7, TOE1, TARGET OF EARLY ACTIVATION TAGGED (EAT) 1 0.193 0.026
51 252890_at AT4G39400 ATBRI1, BIN1, BR INSENSITIVE 1, BRI1, BRASSINOSTEROID INSENSITIVE 1, CBB2, CABBAGE 2, DWF2, DWARF 2 0.193 0.006
52 245730_at AT1G73470 unknown 0.192 -0.012
53 252950_at AT4G38690 [PLC-like phosphodiesterases superfamily protein] 0.188 0.005
54 252463_at AT3G47070 [LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, chloroplast envelope] 0.187 0.063
55 248235_at AT5G53860 emb2737, embryo defective 2737, EMB64, EMBRYO DEFECTIVE 64 0.186 0.007
56 266316_at AT2G27080 [Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family] 0.185 -0.009
57 247563_at AT5G61130 AtPDCB1, PDCB1, plasmodesmata callose-binding protein 1 0.185 -0.031
58 257510_at AT1G55360 unknown 0.184 0.014
59 266587_at AT2G14880 [SWIB/MDM2 domain superfamily protein] 0.184 -0.006
60 252391_at AT3G47860 CHL, chloroplastic lipocalin 0.182 0.028
61 248242_at AT5G53580 AtPLR1, PLR1, pyridoxal reductase 1 0.182 -0.030
62 262809_at AT1G11720 ATSS3, starch synthase 3, SS3, starch synthase 3 0.182 -0.074
63 263737_at AT1G60010 unknown 0.178 -0.020
64 251625_at AT3G57260 AtBG2, AtPR2, BG2, BETA-1,3-GLUCANASE 2, BGL2, beta-1,3-glucanase 2, PR-2, PATHOGENESIS-RELATED PROTEIN 2, PR2, PATHOGENESIS-RELATED PROTEIN 2 0.177 -0.018
65 251762_at AT3G55800 SBPASE, sedoheptulose-bisphosphatase 0.175 -0.010
66 263226_at AT1G30690 [Sec14p-like phosphatidylinositol transfer family protein] 0.173 0.014
67 248377_at AT5G51720 At-NEET, NEET, NEET group protein 0.170 0.000
68 263421_at AT2G17230 EXL5, EXORDIUM like 5 0.170 -0.016
69 249464_at AT5G39710 EMB2745, EMBRYO DEFECTIVE 2745 0.169 -0.007
70 259804_at AT1G72160 [Sec14p-like phosphatidylinositol transfer family protein] 0.168 0.006
71 256255_at AT3G11280 [Duplicated homeodomain-like superfamily protein] 0.168 -0.003
72 249890_at AT5G22570 ATWRKY38, ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 38, WRKY38, WRKY DNA-binding protein 38 0.165 -0.002
73 259625_at AT1G42970 GAPB, glyceraldehyde-3-phosphate dehydrogenase B subunit 0.165 -0.029
74 254638_at AT4G18740 [Rho termination factor] 0.164 0.004
75 252478_at AT3G46540 [ENTH/VHS family protein] 0.164 0.061
76 261456_at AT1G21050 unknown 0.164 0.011
77 267057_at AT2G32500 [Stress responsive alpha-beta barrel domain protein] 0.162 -0.032
78 259736_at AT1G64390 AtGH9C2, glycosyl hydrolase 9C2, GH9C2, glycosyl hydrolase 9C2 0.160 -0.006
79 259848_at AT1G72180 [Leucine-rich receptor-like protein kinase family protein] 0.160 -0.015
80 260669_at AT1G19340 [Methyltransferase MT-A70 family protein] 0.159 -0.037
81 249693_at AT5G35750 AHK2, histidine kinase 2, HK2, histidine kinase 2 0.158 -0.009
82 256070_at AT1G13730 [Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain] 0.158 0.008
83 251820_at AT3G55040 GSTL2, glutathione transferase lambda 2 0.158 -0.025
84 252821_at AT4G39860 unknown 0.156 0.051
85 266117_at AT2G02170 [Remorin family protein] 0.155 -0.044
86 266265_at AT2G29340 [NAD-dependent epimerase/dehydratase family protein] 0.154 -0.056
87 253225_at AT4G35020 ARAC3, RAC-like 3, ATROP6, RAC3, RAC-like 3, RHO1PS, ROP6, RHO-RELATED PROTEIN FROM PLANTS 6 0.154 0.046
88 251519_at AT3G59400 GUN4, GENOMES UNCOUPLED 4 0.153 -0.016
89 266758_at AT2G46920 POL, poltergeist 0.152 0.011
90 260753_at AT1G49230 AtATL78, ATL78, Arabidopsis T?xicos en Levadura 78 0.152 -0.001
91 247153_at AT5G65700 BAM1, BARELY ANY MERISTEM 1 0.151 -0.002
92 260296_at AT1G63750 [Disease resistance protein (TIR-NBS-LRR class) family] 0.151 -0.045
93 259975_at AT1G76470 [NAD(P)-binding Rossmann-fold superfamily protein] -0.951 0.011
94 260527_at AT2G47270 UPB1, UPBEAT1 -0.823 0.026
95 248918_at AT5G45890 AtSAG12, SAG12, senescence-associated gene 12 -0.794 -0.009
96 266078_at AT2G40670 ARR16, response regulator 16, RR16, response regulator 16 -0.763 0.028
97 252320_at AT3G48580 XTH11, xyloglucan endotransglucosylase/hydrolase 11 -0.738 -0.033
98 258516_at AT3G06490 AtMYB108, myb domain protein 108, BOS1, BOTRYTIS-SUSCEPTIBLE1, MYB108, myb domain protein 108 -0.734 0.029
99 262640_at AT1G62760 [Plant invertase/pectin methylesterase inhibitor superfamily protein] -0.712 -0.036
100 266270_at AT2G29470 ATGSTU3, glutathione S-transferase tau 3, GST21, GLUTATHIONE S-TRANSFERASE 21, GSTU3, glutathione S-transferase tau 3 -0.689 -0.009
101 267230_at AT2G44080 ARL, ARGOS-like -0.670 0.020
102 245393_at AT4G16260 [Glycosyl hydrolase superfamily protein] -0.652 -0.029
103 266269_at AT2G29480 ATGSTU2, glutathione S-transferase tau 2, GST20, GLUTATHIONE S-TRANSFERASE 20, GSTU2, glutathione S-transferase tau 2 -0.633 0.019
104 260140_at AT1G66390 ATMYB90, MYB90, myb domain protein 90, PAP2, PRODUCTION OF ANTHOCYANIN PIGMENT 2 -0.622 0.037
105 266139_at AT2G28085 SAUR42, SMALL AUXIN UPREGULATED RNA 42 -0.601 -0.014
106 251635_at AT3G57510 ADPG1 -0.599 0.032
107 262279_at AT1G68630 [PLAC8 family protein] -0.570 -0.005
108 247799_at AT5G58840 [Subtilase family protein] -0.535 0.000
109 258434_at AT3G16770 ATEBP, ethylene-responsive element binding protein, EBP, ethylene-responsive element binding protein, ERF72, ETHYLENE RESPONSE FACTOR 72, RAP2.3, RELATED TO AP2 3 -0.533 0.007
110 259133_at AT3G05400 [Major facilitator superfamily protein] -0.518 -0.008
111 266290_at AT2G29490 ATGSTU1, glutathione S-transferase TAU 1, GST19, GLUTATHIONE S-TRANSFERASE 19, GSTU1, glutathione S-transferase TAU 1 -0.515 0.013
112 256407_at AT1G66570 ATSUC7, sucrose-proton symporter 7, SUC7, sucrose-proton symporter 7 -0.475 0.022
113 259866_at AT1G76640 CML39, CALMODULIN LIKE 39 -0.473 -0.031
114 247324_at AT5G64190 unknown -0.466 -0.012
115 260394_at AT1G74080 ATMYB122, MYB DOMAIN PROTEIN 122, MYB122, myb domain protein 122 -0.449 0.025
116 258395_at AT3G15500 ANAC055, NAC domain containing protein 55, ATNAC3, NAC domain containing protein 3, NAC055, NAC domain containing protein 55, NAC3, NAC domain containing protein 3 -0.446 0.023
117 248424_at AT5G51680 [hydroxyproline-rich glycoprotein family protein] -0.445 0.062
118 251293_at AT3G61930 unknown -0.442 -0.001
119 247026_at AT5G67080 MAPKKK19, mitogen-activated protein kinase kinase kinase 19 -0.441 0.020
120 254597_at AT4G18980 AtS40-3, AtS40-3 -0.435 -0.022
121 263653_at AT1G04310 ERS2, ethylene response sensor 2 -0.431 0.001
122 260278_at AT1G80590 ATWRKY66, WRKY66, WRKY DNA-binding protein 66 -0.426 -0.025
123 266273_at AT2G29410 ATMTPB1, MTPB1, metal tolerance protein B1 -0.415 0.016
124 248564_at AT5G49700 AHL17, AT-hook motif nuclear localized protein 17 -0.415 -0.006
125 249467_at AT5G39610 ANAC092, Arabidopsis NAC domain containing protein 92, ATNAC2, NAC domain containing protein 2, ATNAC6, NAC domain containing protein 6, NAC2, NAC domain containing protein 2, NAC6, NAC domain containing protein 6, ORE1, ORESARA 1 -0.415 0.014
126 255110_at AT4G08770 Prx37, peroxidase 37 -0.411 0.027
127 254575_at AT4G19460 [UDP-Glycosyltransferase superfamily protein] -0.410 0.002
128 265539_at AT2G15830 unknown -0.409 -0.038
129 248227_at AT5G53820 [Late embryogenesis abundant protein (LEA) family protein] -0.404 -0.014
130 266516_at AT2G47880 [Glutaredoxin family protein] -0.404 -0.051
131 247913_at AT5G57510 unknown -0.399 -0.003
132 259134_at AT3G05390 unknown -0.397 -0.012
133 245545_at AT4G15280 UGT71B5, UDP-glucosyl transferase 71B5 -0.395 -0.010
134 262244_at AT1G48260 CIPK17, CBL-interacting protein kinase 17, SnRK3.21, SNF1-RELATED PROTEIN KINASE 3.21 -0.394 0.007
135 251436_at AT3G59900 ARGOS, AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE -0.389 -0.013
136 254630_at AT4G18360 GOX3, glycolate oxidase 3 -0.387 -0.026
137 266805_at AT2G30010 TBL45, TRICHOME BIREFRINGENCE-LIKE 45 -0.386 0.004
138 266352_at AT2G01610 [Plant invertase/pectin methylesterase inhibitor superfamily protein] -0.384 -0.049
139 251766_at AT3G55910 unknown -0.383 0.071
140 257927_at AT3G23240 ATERF1, ETHYLENE RESPONSE FACTOR 1, ERF1, ethylene response factor 1 -0.380 -0.038
141 258100_at AT3G23550 [MATE efflux family protein] -0.378 0.011
142 263210_at AT1G10585 [basic helix-loop-helix (bHLH) DNA-binding superfamily protein] -0.377 0.000
143 253837_at AT4G27850 [Glycine-rich protein family] -0.376 -0.039
144 250666_at AT5G07100 WRKY26, WRKY DNA-binding protein 26 -0.375 0.003
145 245319_at AT4G16146 [cAMP-regulated phosphoprotein 19-related protein] -0.373 0.062
146 254234_at AT4G23680 [Polyketide cyclase/dehydrase and lipid transport superfamily protein] -0.357 0.031
147 250443_at AT5G10520 RBK1, ROP binding protein kinases 1 -0.356 0.007
148 267144_at AT2G38110 ATGPAT6, GLYCEROL-3-PHOSPHATE sn-2-ACYLTRANSFERASE 6, GPAT6, GLYCEROL-3-PHOSPHATE sn-2-ACYLTRANSFERASE 6 -0.352 -0.045
149 251545_at AT3G58810 ATMTP3, ARABIDOPSIS METAL TOLERANCE PROTEIN 3, ATMTPA2, MTP3, METAL TOLERANCE PROTEIN 3, MTPA2, metal tolerance protein A2 -0.347 0.017
150 263096_at AT2G16060 AHB1, hemoglobin 1, ARATH GLB1, ATGLB1, GLB1, CLASS I HEMOGLOBIN, HB1, hemoglobin 1, NSHB1 -0.345 -0.002
151 258957_at AT3G01420 ALPHA-DOX1, alpha-dioxygenase 1, DIOX1, DOX1, PADOX-1, plant alpha dioxygenase 1 -0.345 -0.023
152 260784_at AT1G06180 ATMYB13, myb domain protein 13, ATMYBLFGN, MYB13, myb domain protein 13 -0.344 -0.028
153 265711_at AT2G03360 [Glycosyltransferase family 61 protein] -0.342 0.054
154 263475_at AT2G31945 unknown -0.342 0.021
155 261429_at AT1G18860 ATWRKY61, WRKY DNA-BINDING PROTEIN 61, WRKY61, WRKY DNA-binding protein 61 -0.341 -0.050
156 258925_at AT3G10420 SPD1, SEEDLING PLASTID DEVELOPMENT 1 -0.336 0.010
157 251743_at AT3G55890 [Yippee family putative zinc-binding protein] -0.336 0.058
158 251591_at AT3G57680 [Peptidase S41 family protein] -0.335 0.020
159 248563_at AT5G49690 [UDP-Glycosyltransferase superfamily protein] -0.332 -0.033
160 258815_at AT3G04000 [NAD(P)-binding Rossmann-fold superfamily protein] -0.326 0.004
161 248794_at AT5G47220 ATERF-2, ETHYLENE RESPONSE FACTOR- 2, ATERF2, ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 2, ERF2, ethylene responsive element binding factor 2 -0.324 0.006
162 258971_at AT3G01990 ACR6, ACT domain repeat 6 -0.320 -0.031
163 256181_at AT1G51820 [Leucine-rich repeat protein kinase family protein] -0.317 -0.044
164 250928_at AT5G03280 ATEIN2, CKR1, CYTOKININ RESISTANT 1, EIN2, ETHYLENE INSENSITIVE 2, ERA3, ENHANCED RESPONSE TO ABA3, ORE2, ORESARA 2, ORE3, ORESARA 3, PIR2 -0.313 -0.015
165 261242_at AT1G32960 ATSBT3.3, SBT3.3 -0.311 0.018
166 246183_at AT5G20940 [Glycosyl hydrolase family protein] -0.308 0.018
167 261545_at AT1G63530 unknown -0.306 -0.021
168 260406_at AT1G69920 ATGSTU12, ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 12, GSTU12, glutathione S-transferase TAU 12 -0.304 -0.037
169 260543_at AT2G43330 ATINT1, INOSITOL TRANSPORTER 1, INT1, inositol transporter 1 -0.303 -0.003
170 260561_at AT2G43580 [Chitinase family protein] -0.303 -0.046
171 248777_at AT5G47920 unknown -0.302 -0.033
172 259596_at AT1G28130 GH3.17 -0.302 -0.008
173 247136_at AT5G66170 STR18, sulfurtransferase 18 -0.300 0.011
174 253274_at AT4G34200 EDA9, embryo sac development arrest 9, PGDH1, phosphoglycerate dehydrogenase 1 -0.294 0.002
175 267628_at AT2G42280 AKS3, ABA-responsive kinase substrate 3, FBH4, FLOWERING BHLH 4 -0.291 0.030
176 263363_at AT2G03850 [Late embryogenesis abundant protein (LEA) family protein] -0.290 0.027
177 252367_at AT3G48360 ATBT2, BT2, BTB and TAZ domain protein 2 -0.290 0.006
178 257636_at AT3G26200 CYP71B22, cytochrome P450, family 71, subfamily B, polypeptide 22 -0.290 -0.047
179 263931_at AT2G36220 unknown -0.288 0.014
180 249942_at AT5G22300 AtNIT4, NITRILASE 4, NIT4, nitrilase 4 -0.287 -0.009
181 254632_at AT4G18630 unknown -0.287 -0.015
182 251106_at AT5G01500 TAAC, thylakoid ATP/ADP carrier -0.283 -0.009
183 251144_at AT5G01210 [HXXXD-type acyl-transferase family protein] -0.281 -0.007