4.0:Information of module
TNT-seedlings
In comparison with ein5-1 ski2-3 help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0010200 response to chitin BP 1.326e-15
GO:0010243 response to organonitrogen compound BP 3.280e-15
GO:1901698 response to nitrogen compound BP 2.340e-12
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0010054 trichoblast differentiation BP 1.355e-16
GO:0010053 root epidermal cell differentiation BP 3.146e-16
GO:0090627 plant epidermal cell differentiation BP 5.439e-16
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
TNT-seedlings		 Log2 signal ratio
ein5-1 ski2-3
1 248164_at AT5G54490 PBP1, pinoid-binding protein 1 0.481 1.373
2 247655_at AT5G59820 AtZAT12, RHL41, RESPONSIVE TO HIGH LIGHT 41, ZAT12 0.443 3.600
3 253796_at AT4G28460 unknown 0.431 1.562
4 247047_at AT5G66650 unknown 0.367 4.834
5 261564_at AT1G01720 ANAC002, Arabidopsis NAC domain containing protein 2, ATAF1 0.346 2.392
6 257536_at AT3G02800 AtPFA-DSP3, PFA-DSP3, plant and fungi atypical dual-specificity phosphatase 3 0.326 1.382
7 245252_at AT4G17500 ATERF-1, ethylene responsive element binding factor 1, ERF-1, ethylene responsive element binding factor 1 0.259 2.098
8 245711_at AT5G04340 C2H2, CZF2, COLD INDUCED ZINC FINGER PROTEIN 2, ZAT6, zinc finger of Arabidopsis thaliana 6 0.246 2.287
9 263931_at AT2G36220 unknown 0.217 2.996
10 262072_at AT1G59590 ZCF37 0.216 2.876
11 253485_at AT4G31800 ATWRKY18, ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 18, WRKY18, WRKY DNA-binding protein 18 0.210 5.574
12 257022_at AT3G19580 AZF2, zinc-finger protein 2, ZF2, zinc-finger protein 2 0.199 3.367
13 260475_at AT1G11080 scpl31, serine carboxypeptidase-like 31 0.195 0.890
14 265648_at AT2G27500 [Glycosyl hydrolase superfamily protein] 0.186 3.293
15 251774_at AT3G55840 [Hs1pro-1 protein] 0.180 3.163
16 265184_at AT1G23710 unknown 0.174 3.450
17 260401_at AT1G69840 [SPFH/Band 7/PHB domain-containing membrane-associated protein family] 0.165 2.323
18 246018_at AT5G10695 unknown 0.158 3.148
19 265849_at AT2G35736 unknown 0.156 0.256
20 254496_at AT4G20070 AAH, allantoate amidohydrolase, ATAAH, allantoate amidohydrolase 0.155 0.531
21 260831_at AT1G06830 [Glutaredoxin family protein] 0.152 -0.827
22 261193_at AT1G32920 unknown 0.150 2.943
23 253323_at AT4G33920 APD5, Arabidopsis Pp2c clade D 5 0.145 3.134
24 264633_at AT1G65660 SMP1, SWELLMAP 1 0.139 -0.232
25 262916_at AT1G59700 ATGSTU16, glutathione S-transferase TAU 16, GSTU16, glutathione S-transferase TAU 16 0.138 0.598
26 247193_at AT5G65380 [MATE efflux family protein] 0.137 0.469
27 249746_at AT5G24590 ANAC091, Arabidopsis NAC domain containing protein 91, TIP, TCV-interacting protein 0.135 3.216
28 263376_at AT2G20520 FLA6, FASCICLIN-like arabinogalactan 6 -0.475 -0.406
29 252833_at AT4G40090 AGP3, arabinogalactan protein 3 -0.413 -0.406
30 249934_at AT5G22410 RHS18, root hair specific 18 -0.409 -0.406
31 254044_at AT4G25820 ATXTH14, XTH14, xyloglucan endotransglucosylase/hydrolase 14, XTR9, xyloglucan endotransglycosylase 9 -0.392 -0.406
32 255516_at AT4G02270 RHS13, root hair specific 13 -0.382 -0.406
33 249606_at AT5G37260 CIR1, CIRCADIAN 1, RVE2, REVEILLE 2 -0.382 -0.321
34 246991_at AT5G67400 RHS19, root hair specific 19 -0.367 -0.406
35 259388_at AT1G13420 ATST4B, ARABIDOPSIS THALIANA SULFOTRANSFERASE 4B, ST4B, sulfotransferase 4B -0.348 0.256
36 254025_at AT4G25790 [CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein] -0.309 -0.038
37 259813_at AT1G49860 ATGSTF14, glutathione S-transferase (class phi) 14, GSTF14, glutathione S-transferase (class phi) 14 -0.299 0.256
38 263552_x_at AT2G24980 EXT6, extensin 6 -0.292 -0.418
39 253998_at AT4G26010 [Peroxidase superfamily protein] -0.289 -0.406
40 259525_at AT1G12560 ATEXP7, ATEXPA7, expansin A7, ATHEXP ALPHA 1.26, EXP7, EXPA7, expansin A7 -0.289 -0.406
41 245966_at AT5G19790 RAP2.11, related to AP2 11 -0.274 -0.406
42 250683_x_at AT5G06640 EXT10, extensin 10 -0.269 0.122
43 265102_at AT1G30870 [Peroxidase superfamily protein] -0.264 -0.406
44 251843_x_at AT3G54590 ATHRGP1, hydroxyproline-rich glycoprotein, HRGP1, hydroxyproline-rich glycoprotein -0.260 1.094
45 253353_at AT4G33730 [CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein] -0.255 -0.406
46 253613_at AT4G30320 [CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein] -0.253 -0.406
47 254534_at AT4G19680 ATIRT2, IRON REGULATED TRANSPORTER 2, IRT2, iron regulated transporter 2 -0.236 -0.406
48 249773_at AT5G24140 SQP2, squalene monooxygenase 2 -0.235 -0.406
49 250682_x_at AT5G06630 [proline-rich extensin-like family protein] -0.197 -0.717
50 264144_at AT1G79320 AtMC6, metacaspase 6, AtMCP2c, metacaspase 2c, MC6, metacaspase 6, MCP2c, metacaspase 2c -0.192 -0.406
51 245172_at AT2G47540 [Pollen Ole e 1 allergen and extensin family protein] -0.192 -0.406
52 256736_at AT3G29410 [Terpenoid cyclases/Protein prenyltransferases superfamily protein] -0.186 -0.406
53 250560_at AT5G08020 ATRPA70B, ARABIDOPSIS THALIANA RPA70-KDA SUBUNIT B, RPA70B, RPA70-kDa subunit B -0.181 -1.420