4.0:Information of module
PstDC3000 48h
In comparison with Methyl Jasmonate 1 h  help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0009814 defense response, incompatible interacti... BP 1.909e-23
GO:0098542 defense response to other organism BP 4.065e-22
GO:0009627 systemic acquired resistance BP 9.307e-22
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0009611 response to wounding BP 2.349e-14
GO:0009414 response to water deprivation BP 6.768e-13
GO:0001101 response to acid chemical BP 9.298e-13
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
PstDC3000 48h		 Log2 signal ratio
Methyl Jasmonate 1 h
1 267345_at AT2G44240 unknown 0.790 0.033
2 254975_at AT4G10500 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] 0.643 0.364
3 247684_at AT5G59670 [Leucine-rich repeat protein kinase family protein] 0.451 -0.006
4 266385_at AT2G14610 ATPR1, PATHOGENESIS-RELATED GENE 1, PR 1, PATHOGENESIS-RELATED GENE 1, PR1, pathogenesis-related gene 1 0.445 0.083
5 259925_at AT1G75040 PR-5, PR5, pathogenesis-related gene 5 0.425 0.098
6 259385_at AT1G13470 unknown 0.406 0.014
7 265161_at AT1G30900 BP80-3;3, binding protein of 80 kDa 3;3, VSR3;3, VACUOLAR SORTING RECEPTOR 3;3, VSR6, VACUOLAR SORTING RECEPTOR 6 0.397 0.048
8 248322_at AT5G52760 [Copper transport protein family] 0.387 -0.158
9 252346_at AT3G48650 [pseudogene] 0.316 -0.028
10 252098_at AT3G51330 [Eukaryotic aspartyl protease family protein] 0.303 0.002
11 254271_at AT4G23150 CRK7, cysteine-rich RLK (RECEPTOR-like protein kinase) 7 0.299 0.042
12 252549_at AT3G45860 CRK4, cysteine-rich RLK (RECEPTOR-like protein kinase) 4 0.285 0.005
13 249940_at AT5G22380 anac090, NAC domain containing protein 90, NAC090, NAC domain containing protein 90 0.269 0.057
14 248169_at AT5G54610 ANK, ankyrin, BDA1, bian da 2 (becoming big in Chinese) 0.265 0.025
15 260568_at AT2G43570 CHI, chitinase, putative 0.254 0.106
16 245566_at AT4G14610 [pseudogene] 0.254 0.021
17 264434_at AT1G10340 [Ankyrin repeat family protein] 0.254 -0.043
18 254266_at AT4G23130 CRK5, cysteine-rich RLK (RECEPTOR-like protein kinase) 5, RLK6, RECEPTOR-LIKE PROTEIN KINASE 6 0.237 -0.053
19 245052_at AT2G26440 PME12, pectin methylesterase 12 0.235 0.043
20 245329_at AT4G14365 XBAT34, XB3 ortholog 4 in Arabidopsis thaliana 0.234 -0.052
21 252345_at AT3G48640 unknown 0.227 0.048
22 259272_at AT3G01290 AtHIR2, HIR2, hypersensitive induced reaction 2 0.226 -0.106
23 249096_at AT5G43910 [pfkB-like carbohydrate kinase family protein] 0.219 -0.119
24 250533_at AT5G08640 ATFLS1, FLS, FLAVONOL SYNTHASE, FLS1, flavonol synthase 1 0.215 0.000
25 245038_at AT2G26560 PLA IIA, PHOSPHOLIPASE A 2A, PLA2A, phospholipase A 2A, PLAII alpha, PLP2, PATATIN-LIKE PROTEIN 2, PLP2, PHOSPHOLIPASE A 2A 0.213 0.320
26 254901_at AT4G11530 CRK34, cysteine-rich RLK (RECEPTOR-like protein kinase) 34 0.208 -0.015
27 263068_at AT2G17580 [Polynucleotide adenylyltransferase family protein] 0.207 -0.005
28 256596_at AT3G28540 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] 0.205 0.058
29 259632_at AT1G56430 ATNAS4, ARABIDOPSIS THALIANA NICOTIANAMINE SYNTHASE 4, NAS4, nicotianamine synthase 4 0.202 -0.257
30 265698_at AT2G32160 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] 0.197 0.141
31 265067_at AT1G03850 ATGRXS13, glutaredoxin 13, GRXS13, glutaredoxin 13 0.194 -0.288
32 258419_at AT3G16670 [Pollen Ole e 1 allergen and extensin family protein] 0.192 0.012
33 249417_at AT5G39670 [Calcium-binding EF-hand family protein] 0.192 -0.001
34 259428_at AT1G01560 ATMPK11, MAP kinase 11, MPK11, MAP kinase 11 0.187 -0.030
35 246236_at AT4G36470 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] 0.186 -0.039
36 251232_at AT3G62780 [Calcium-dependent lipid-binding (CaLB domain) family protein] 0.183 -0.021
37 255341_at AT4G04500 CRK37, cysteine-rich RLK (RECEPTOR-like protein kinase) 37 0.181 0.014
38 249188_at AT5G42830 [HXXXD-type acyl-transferase family protein] 0.178 -0.013
39 250679_at AT5G06550 JMJ22, Jumonji domain-containing protein 22 0.177 -0.147
40 262802_at AT1G20930 CDKB2;2, cyclin-dependent kinase B2;2 0.176 -0.018
41 263594_at AT2G01880 ATPAP7, PURPLE ACID PHOSPHATASE 7, PAP7, purple acid phosphatase 7 0.174 0.282
42 250646_at AT5G06720 ATPA2, peroxidase 2, AtPRX53, PA2, peroxidase 2, PRX53, peroxidase 53 0.173 -0.024
43 246098_at AT5G20400 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] 0.172 -0.055
44 263161_at AT1G54020 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.429 0.781
45 245422_at AT4G17470 [alpha/beta-Hydrolases superfamily protein] -0.388 0.714
46 266989_at AT2G39330 JAL23, jacalin-related lectin 23 -0.386 0.437
47 266142_at AT2G39030 NATA1, N-acetyltransferase activity 1 -0.359 0.739
48 253073_at AT4G37410 CYP81F4, cytochrome P450, family 81, subfamily F, polypeptide 4 -0.348 0.095
49 267168_at AT2G37770 AKR4C9, Aldo-keto reductase family 4 member C9, ChlAKR, Chloroplastic aldo-keto reductase -0.313 -0.003
50 259286_at AT3G11480 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein -0.303 0.093
51 258983_at AT3G08860 PYD4, PYRIMIDINE 4 -0.289 0.078
52 267425_at AT2G34810 [FAD-binding Berberine family protein] -0.285 0.576
53 251770_at AT3G55970 ATJRG21, JRG21, jasmonate-regulated gene 21 -0.277 0.884
54 250793_at AT5G05600 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] -0.277 0.822
55 245253_at AT4G15440 CYP74B2, HPL1, hydroperoxide lyase 1 -0.274 1.024
56 256603_at AT3G28270 unknown -0.270 0.064
57 247764_at AT5G59190 [subtilase family protein] -0.259 0.046
58 263031_at AT1G24070 ATCSLA10, cellulose synthase-like A10, CSLA10, CELLULOSE SYNTHASE LIKE A10, CSLA10, cellulose synthase-like A10 -0.259 0.580
59 266743_at AT2G02990 ATRNS1, RIBONUCLEASE 1, RNS1, ribonuclease 1 -0.258 0.173
60 265053_at AT1G52000 [Mannose-binding lectin superfamily protein] -0.256 0.850
61 260203_at AT1G52890 ANAC019, NAC domain containing protein 19, NAC019, NAC domain containing protein 19 -0.242 0.744
62 252265_at AT3G49620 DIN11, DARK INDUCIBLE 11 -0.240 0.388
63 259609_at AT1G52410 AtTSA1, TSA1, TSK-associating protein 1 -0.233 0.509
64 250292_at AT5G13220 JAS1, JASMONATE-ASSOCIATED 1, JAZ10, jasmonate-zim-domain protein 10, TIFY9, TIFY DOMAIN PROTEIN 9 -0.229 1.263
65 245794_at AT1G32170 XTH30, xyloglucan endotransglucosylase/hydrolase 30, XTR4, xyloglucan endotransglycosylase 4 -0.217 -0.237
66 256924_at AT3G29590 AT5MAT -0.216 0.107
67 258367_at AT3G14370 WAG2 -0.211 -0.238
68 249215_at AT5G42800 DFR, dihydroflavonol 4-reductase, M318, TT3 -0.206 -0.022
69 261437_at AT1G07745 ATRAD51D, RAD51D, homolog of RAD51 D, SSN1, SUPPRESOR OF SNI1 -0.204 0.027
70 249732_at AT5G24420 PGL5, 6-phosphogluconolactonase 5 -0.204 0.585
71 247723_at AT5G59220 HAI1, highly ABA-induced PP2C gene 1, SAG113, senescence associated gene 113 -0.195 0.063
72 259878_at AT1G76790 IGMT5, indole glucosinolate O-methyltransferase 5 -0.194 0.251
73 259384_at AT3G16450 JAL33, Jacalin-related lectin 33 -0.194 0.014
74 258225_at AT3G15630 unknown -0.190 -0.108
75 247175_at AT5G65280 GCL1, GCR2-like 1 -0.187 0.761
76 257798_at AT3G15950 NAI2 -0.183 0.040
77 250083_at AT5G17220 ATGSTF12, ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE PHI 12, GST26, GLUTATHIONE S-TRANSFERASE 26, GSTF12, glutathione S-transferase phi 12, TT19, TRANSPARENT TESTA 19 -0.180 -0.087
78 256097_at AT1G13670 unknown -0.179 -0.138
79 245572_at AT4G14720 PPD2, PEAPOD 2, TIFY4B -0.176 0.002
80 266823_at AT2G44930 unknown -0.175 -0.031
81 265511_at AT2G05540 [Glycine-rich protein family] -0.175 0.046
82 246620_at AT5G36220 CYP81D1, cytochrome P450, family 81, subfamily D, polypeptide 1, CYP91A1, CYTOCHROME P450 91A1 -0.174 0.471
83 266977_at AT2G39420 [alpha/beta-Hydrolases superfamily protein] -0.170 0.481
84 256577_at AT3G28220 [TRAF-like family protein] -0.169 0.685
85 245668_at AT1G28330 AtDRM1, DRM1, DORMANCY-ASSOCIATED PROTEIN 1, DYL1, dormancy-associated protein-like 1 -0.168 -0.263