4.0:Information of module
oas-a1.1 root
In comparison with Dark 1day wt help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0000041 transition metal ion transport BP 4.404e-07
GO:0006820 anion transport BP 4.694e-07
GO:0006811 ion transport BP 8.808e-07
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0009746 response to hexose BP 7.574e-09
GO:0034284 response to monosaccharide BP 1.405e-08
GO:0009750 response to fructose BP 6.886e-08
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
oas-a1.1 root		 Log2 signal ratio
Dark 1day wt
1 256940_at AT3G30720 QQS, QUA-QUINE STARCH 0.600 1.033
2 258133_at AT3G24500 ATMBF1C, MBF1C, multiprotein bridging factor 1C 0.529 2.255
3 265208_at AT2G36690 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] 0.463 2.147
4 258178_at AT3G21680 unknown 0.422 -0.154
5 252123_at AT3G51240 F3'H, F3H, flavanone 3-hydroxylase, TT6, TRANSPARENT TESTA 6 0.397 -0.872
6 251895_at AT3G54420 ATCHITIV, CHITINASE CLASS IV, ATEP3, homolog of carrot EP3-3 chitinase, CHIV, EP3, homolog of carrot EP3-3 chitinase 0.324 -1.396
7 246981_at AT5G04840 [bZIP protein] 0.310 -1.740
8 267096_at AT2G38180 [SGNH hydrolase-type esterase superfamily protein] 0.307 1.539
9 256999_at AT3G14200 [Chaperone DnaJ-domain superfamily protein] 0.299 1.357
10 249769_at AT5G24120 ATSIG5, SIGMA FACTOR 5, SIG5, SIGMA FACTOR 5, SIGE, sigma factor E 0.288 -2.840
11 262533_at AT1G17090 unknown 0.275 -0.722
12 260025_at AT1G30070 [SGS domain-containing protein] 0.272 0.622
13 252202_at AT3G50300 [HXXXD-type acyl-transferase family protein] 0.271 -0.334
14 254976_at AT4G10510 [Subtilase family protein] 0.266 -0.334
15 264759_at AT1G61480 [S-locus lectin protein kinase family protein] 0.264 -0.334
16 258270_at AT3G15650 [alpha/beta-Hydrolases superfamily protein] 0.264 -0.959
17 254056_at AT4G25250 [Plant invertase/pectin methylesterase inhibitor superfamily protein] 0.264 -0.334
18 249063_at AT5G44110 ABCI21, ATP-binding cassette A21, ATNAP2, ARABIDOPSIS THALIANA NON-INTRINSIC ABC PROTEIN, ATPOP1, POP1 0.264 -2.781
19 248978_at AT5G45070 AtPP2-A8, phloem protein 2-A8, PP2-A8, phloem protein 2-A8 0.256 0.682
20 250533_at AT5G08640 ATFLS1, FLS, FLAVONOL SYNTHASE, FLS1, flavonol synthase 1 0.255 -2.125
21 256162_at AT1G55390 [Cysteine/Histidine-rich C1 domain family protein] 0.253 1.906
22 260568_at AT2G43570 CHI, chitinase, putative 0.245 -4.047
23 264859_at AT1G24280 G6PD3, glucose-6-phosphate dehydrogenase 3 0.243 -2.576
24 256751_at AT3G27170 ATCLC-B, CLC-B, chloride channel B 0.231 -4.631
25 248183_at AT5G54040 [Cysteine/Histidine-rich C1 domain family protein] 0.214 -0.334
26 263575_at AT2G17070 unknown 0.214 -0.334
27 258830_at AT3G07090 [PPPDE putative thiol peptidase family protein] 0.213 -0.586
28 248964_at AT5G45340 CYP707A3, cytochrome P450, family 707, subfamily A, polypeptide 3 0.213 0.511
29 245286_at AT4G14880 ATCYS-3A, CYTACS1, OASA1, O-acetylserine (thiol) lyase (OAS-TL) isoform A1, OLD3, ONSET OF LEAF DEATH 3 -1.448 1.223
30 260741_at AT1G15040 GAT, glutamine amidotransferase, GAT1_2.1, glutamine amidotransferase 1_2.1 -0.749 8.277
31 249337_at AT5G41080 AtGDPD2, GDPD2, glycerophosphodiester phosphodiesterase 2 -0.707 6.455
32 253161_at AT4G35770 ATSEN1, ARABIDOPSIS THALIANA SENESCENCE 1, DIN1, DARK INDUCIBLE 1, SEN1, SENESCENCE 1, SEN1, SENESCENCE ASSOCIATED GENE 1 -0.681 8.452
33 248793_at AT5G47240 atnudt8, nudix hydrolase homolog 8, NUDT8, nudix hydrolase homolog 8 -0.664 4.700
34 265387_at AT2G20670 unknown -0.496 3.066
35 253615_at AT4G30360 ATCNGC17, CYCLIC NUCLEOTIDE-GATED CHANNEL 17, CNGC17, cyclic nucleotide-gated channel 17 -0.414 1.170
36 256697_at AT3G20660 AtOCT4, organic cation/carnitine transporter4, OCT4, organic cation/carnitine transporter4 -0.357 3.192
37 247047_at AT5G66650 unknown -0.346 2.125
38 264551_at AT1G09460 [Carbohydrate-binding X8 domain superfamily protein] -0.293 1.921
39 264788_at AT2G17880 DJC24, DNA J protein C24 -0.293 2.405
40 253322_at AT4G33980 unknown -0.288 10.350
41 250007_at AT5G18670 BAM9, BETA-AMYLASE 9, BMY3, beta-amylase 3 -0.284 -0.956
42 259364_at AT1G13260 EDF4, ETHYLENE RESPONSE DNA BINDING FACTOR 4, RAV1, related to ABI3/VP1 1 -0.275 1.253
43 249862_at AT5G22920 [CHY-type/CTCHY-type/RING-type Zinc finger protein] -0.274 3.929
44 267357_at AT2G40000 ATHSPRO2, ARABIDOPSIS ORTHOLOG OF SUGAR BEET HS1 PRO-1 2, HSPRO2, ortholog of sugar beet HS1 PRO-1 2 -0.253 1.686
45 255127_at AT4G08300 UMAMIT17, Usually multiple acids move in and out Transporters 17 -0.249 -2.702
46 258395_at AT3G15500 ANAC055, NAC domain containing protein 55, ATNAC3, NAC domain containing protein 3, NAC055, NAC domain containing protein 55, NAC3, NAC domain containing protein 3 -0.242 4.292
47 249626_at AT5G37540 [Eukaryotic aspartyl protease family protein] -0.235 0.634
48 252991_at AT4G38470 STY46, serine/threonine/tyrosine kinase 46 -0.232 2.904
49 257315_at AT3G30775 AT-POX, ATPDH, ATPOX, ARABIDOPSIS THALIANA PROLINE OXIDASE, ERD5, EARLY RESPONSIVE TO DEHYDRATION 5, PDH1, proline dehydrogenase 1, PRO1, PRODH, PROLINE DEHYDROGENASE -0.222 5.462
50 264339_at AT1G70290 ATTPS8, ATTPSC, TPS8, trehalose-6-phosphatase synthase S8 -0.218 1.876
51 264597_at AT1G04620 HCAR, 7-hydroxymethyl chlorophyll a (HMChl) reductase -0.217 2.022
52 254787_at AT4G12690 unknown -0.213 1.719
53 249742_at AT5G24490 [30S ribosomal protein, putative] -0.211 1.523
54 267477_at AT2G02710 PLP, PAS/LOV PROTEIN, PLPA, PAS/LOV PROTEIN A, PLPB, PAS/LOV protein B, PLPC, PAS/LOV PROTEIN C -0.207 3.204
55 266656_at AT2G25900 ATCTH, ATTZF1, A. THALIANA TANDEM ZINC FINGER PROTEIN 1 -0.205 1.450