4.0:Information of module
sid2-avrB-6h
In comparison with ddm1 mutant seedlings help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0010200 response to chitin BP 2.883e-47
GO:0010243 response to organonitrogen compound BP 2.512e-46
GO:1901698 response to nitrogen compound BP 7.055e-36
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0009627 systemic acquired resistance BP 3.739e-40
GO:0009814 defense response, incompatible interacti... BP 6.051e-39
GO:0045087 innate immune response BP 1.688e-31
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
sid2-avrB-6h		 Log2 signal ratio
ddm1 mutant seedlings
1 252014_at AT3G52870 [IQ calmodulin-binding motif family protein] 1.188 0.043
2 261459_at AT1G21100 IGMT1, indole glucosinolate O-methyltransferase 1 0.570 -0.197
3 265387_at AT2G20670 unknown 0.558 -0.054
4 253608_at AT4G30290 ATXTH19, XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 19, XTH19, xyloglucan endotransglucosylase/hydrolase 19 0.541 -0.051
5 251774_at AT3G55840 [Hs1pro-1 protein] 0.502 -0.057
6 245755_at AT1G35210 unknown 0.483 -0.032
7 253061_at AT4G37610 BT5, BTB and TAZ domain protein 5 0.478 -0.097
8 258377_at AT3G17690 ATCNGC19, CYCLIC NUCLEOTIDE-GATED CHANNEL 19, CNGC19, cyclic nucleotide gated channel 19 0.461 0.118
9 256306_at AT1G30370 DLAH, DAD1-like acylhydrolase 0.448 -0.019
10 257536_at AT3G02800 AtPFA-DSP3, PFA-DSP3, plant and fungi atypical dual-specificity phosphatase 3 0.438 -0.022
11 253571_at AT4G31000 [Calmodulin-binding protein] 0.433 -0.043
12 247026_at AT5G67080 MAPKKK19, mitogen-activated protein kinase kinase kinase 19 0.418 -0.200
13 265111_at AT1G62510 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] 0.404 -0.228
14 260856_at AT1G21910 DREB26, dehydration response element-binding protein 26 0.391 -0.050
15 254323_at AT4G22620 SAUR34, SMALL AUXIN UPREGULATED RNA 34 0.383 0.028
16 259879_at AT1G76650 CML38, calmodulin-like 38 0.376 -0.285
17 247189_at AT5G65390 AGP7, arabinogalactan protein 7 0.371 -0.028
18 247913_at AT5G57510 unknown 0.339 -0.042
19 253819_at AT4G28350 LecRK-VII.2, L-type lectin receptor kinase VII.2 0.324 -0.065
20 247543_at AT5G61600 ERF104, ethylene response factor 104 0.318 0.042
21 248959_at AT5G45630 unknown 0.317 0.012
22 248799_at AT5G47230 ATERF-5, ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR- 5, ATERF5, ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 5, AtMACD1, ERF102, ERF5, ethylene responsive element binding factor 5 0.317 0.004
23 254905_at AT4G11170 RMG1, Resistance Methylated Gene 1 0.314 -0.022
24 247693_at AT5G59730 ATEXO70H7, exocyst subunit exo70 family protein H7, EXO70H7, exocyst subunit exo70 family protein H7 0.313 -0.044
25 255884_at AT1G20310 unknown 0.305 0.039
26 266821_at AT2G44840 ATERF13, ETHYLENE-RESPONSIVE ELEMENT BINDING FACTOR 13, EREBP, ERF13, ethylene-responsive element binding factor 13 0.305 0.013
27 245119_at AT2G41640 [Glycosyltransferase family 61 protein] 0.301 -0.035
28 267357_at AT2G40000 ATHSPRO2, ARABIDOPSIS ORTHOLOG OF SUGAR BEET HS1 PRO-1 2, HSPRO2, ortholog of sugar beet HS1 PRO-1 2 0.301 -0.104
29 248448_at AT5G51190 [Integrase-type DNA-binding superfamily protein] 0.300 0.068
30 260881_at AT1G21550 [Calcium-binding EF-hand family protein] 0.293 0.005
31 263799_at AT2G24550 unknown 0.290 -0.009
32 248164_at AT5G54490 PBP1, pinoid-binding protein 1 0.287 -0.080
33 251281_at AT3G61640 AGP20, arabinogalactan protein 20, AtAGP20, Arabinogalactan protein 20 0.287 0.000
34 261220_at AT1G19970 [ER lumen protein retaining receptor family protein] 0.286 -0.032
35 266486_at AT2G47950 unknown 0.267 0.006
36 248460_at AT5G50915 [basic helix-loop-helix (bHLH) DNA-binding superfamily protein] 0.267 -0.059
37 249583_at AT5G37770 CML24, CALMODULIN-LIKE 24, TCH2, TOUCH 2 0.266 -0.085
38 246200_at AT4G37240 unknown 0.266 -0.164
39 255568_at AT4G01250 AtWRKY22, WRKY22 0.263 -0.056
40 267451_at AT2G33710 [Integrase-type DNA-binding superfamily protein] 0.260 -0.029
41 263918_at AT2G36590 ATPROT3, PROLINE TRANSPORTER 3, ProT3, proline transporter 3 0.256 -0.154
42 261455_at AT1G21070 [Nucleotide-sugar transporter family protein] 0.253 -0.078
43 263182_at AT1G05575 unknown 0.246 -0.032
44 251745_at AT3G55980 ATSZF1, SZF1, salt-inducible zinc finger 1 0.246 0.028
45 254408_at AT4G21390 B120 0.243 0.017
46 266545_at AT2G35290 SAUR79, SMALL AUXIN UPREGULATED RNA 79 0.243 0.037
47 247925_at AT5G57560 TCH4, Touch 4, XTH22, xyloglucan endotransglucosylase/hydrolase 22 0.236 -0.076
48 253919_at AT4G27350 unknown 0.233 -0.024
49 267230_at AT2G44080 ARL, ARGOS-like 0.231 -0.115
50 264866_at AT1G24140 [Matrixin family protein] 0.230 -0.018
51 260287_at AT1G80440 KFB20, Kelch repeat F-box 20, KMD1, KISS ME DEADLY 1 0.227 -0.062
52 257401_at AT1G23550 SRO2, similar to RCD one 2 0.227 -0.018
53 245777_at AT1G73540 atnudt21, nudix hydrolase homolog 21, NUDT21, nudix hydrolase homolog 21 0.225 -0.051
54 250149_at AT5G14700 [NAD(P)-binding Rossmann-fold superfamily protein] 0.217 0.009
55 245252_at AT4G17500 ATERF-1, ethylene responsive element binding factor 1, ERF-1, ethylene responsive element binding factor 1 0.216 -0.064
56 265499_at AT2G15480 UGT73B5, UDP-glucosyl transferase 73B5 0.214 0.000
57 256526_at AT1G66090 [Disease resistance protein (TIR-NBS class)] 0.212 0.033
58 250449_at AT5G10830 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] 0.210 0.034
59 263228_at AT1G30700 [FAD-binding Berberine family protein] 0.204 0.015
60 247707_at AT5G59450 [GRAS family transcription factor] 0.201 0.017
61 247597_at AT5G60860 AtRABA1f, RAB GTPase homolog A1F, RABA1f, RAB GTPase homolog A1F 0.200 -0.020
62 249955_at AT5G18840 [Major facilitator superfamily protein] 0.199 0.070
63 249923_at AT5G19120 [Eukaryotic aspartyl protease family protein] 0.199 -0.052
64 254063_at AT4G25390 [Protein kinase superfamily protein] 0.198 -0.066
65 249890_at AT5G22570 ATWRKY38, ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 38, WRKY38, WRKY DNA-binding protein 38 -1.301 0.029
66 254975_at AT4G10500 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] -1.098 0.196
67 266385_at AT2G14610 ATPR1, PATHOGENESIS-RELATED GENE 1, PR 1, PATHOGENESIS-RELATED GENE 1, PR1, pathogenesis-related gene 1 -0.899 0.518
68 256593_at AT3G28510 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.843 0.131
69 264958_at AT1G76960 unknown -0.789 0.052
70 250942_at AT5G03350 [Legume lectin family protein] -0.764 0.037
71 249052_at AT5G44420 LCR77, LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 77, PDF1.2, plant defensin 1.2, PDF1.2A, PLANT DEFENSIN 1.2A -0.739 -0.057
72 251673_at AT3G57240 AtBG3, BG3, beta-1,3-glucanase 3 -0.719 0.170
73 249743_at AT5G24540 BGLU31, beta glucosidase 31 -0.710 0.037
74 260904_at AT1G02450 NIMIN-1, NIMIN1, NIM1-interacting 1 -0.710 0.032
75 245035_at AT2G26400 ARD, ACIREDUCTONE DIOXYGENASE, ARD3, acireductone dioxygenase 3, ATARD3, acireductone dioxygenase 3 -0.680 0.187
76 252403_at AT3G48080 [alpha/beta-Hydrolases superfamily protein] -0.678 0.059
77 261221_at AT1G19960 unknown -0.670 0.078
78 265837_at AT2G14560 LURP1, LATE UPREGULATED IN RESPONSE TO HYALOPERONOSPORA PARASITICA -0.610 0.039
79 251625_at AT3G57260 AtBG2, AtPR2, BG2, BETA-1,3-GLUCANASE 2, BGL2, beta-1,3-glucanase 2, PR-2, PATHOGENESIS-RELATED PROTEIN 2, PR2, PATHOGENESIS-RELATED PROTEIN 2 -0.522 0.307
80 265067_at AT1G03850 ATGRXS13, glutaredoxin 13, GRXS13, glutaredoxin 13 -0.518 -0.001
81 248970_at AT5G45380 ATDUR3, DUR3, DEGRADATION OF UREA 3 -0.481 -0.007
82 256252_at AT3G11340 UGT76B1, UDP-dependent glycosyltransferase 76B1 -0.477 0.107
83 266070_at AT2G18660 AtPNP-A, PNP-A, plant natriuretic peptide A -0.462 0.091
84 257365_x_at AT2G26020 PDF1.2b, plant defensin 1.2b -0.462 -0.053
85 259489_at AT1G15790 unknown -0.457 0.063
86 248333_at AT5G52390 [PAR1 protein] -0.437 0.127
87 252098_at AT3G51330 [Eukaryotic aspartyl protease family protein] -0.425 0.121
88 250445_at AT5G10760 [Eukaryotic aspartyl protease family protein] -0.424 0.266
89 260146_at AT1G52770 [Phototropic-responsive NPH3 family protein] -0.420 0.033
90 251419_at AT3G60470 unknown -0.415 0.127
91 257382_at AT2G40750 ATWRKY54, WRKY DNA-BINDING PROTEIN 54, WRKY54, WRKY DNA-binding protein 54 -0.409 0.205
92 248062_at AT5G55450 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.403 0.147
93 245076_at AT2G23170 GH3.3 -0.397 0.060
94 256596_at AT3G28540 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.394 -0.074
95 250810_at AT5G05090 [Homeodomain-like superfamily protein] -0.380 -0.027
96 254093_at AT4G25110 AtMC2, metacaspase 2, AtMCP1c, metacaspase 1c, MC2, metacaspase 2, MCP1c, metacaspase 1c -0.372 -0.058
97 245611_at AT4G14390 [Ankyrin repeat family protein] -0.368 0.121
98 257591_at AT3G24900 AtRLP39, receptor like protein 39, RLP39, receptor like protein 39 -0.354 0.069
99 260884_at AT1G29240 unknown -0.334 0.052
100 267412_at AT2G34940 BP80-3;2, binding protein of 80 kDa 3;2, VSR3;2, VACUOLAR SORTING RECEPTOR 3;2, VSR5, VACUOLAR SORTING RECEPTOR 5 -0.329 0.005
101 262888_at AT1G14790 AtRDR1, ATRDRP1, RDR1, RNA-dependent RNA polymerase 1 -0.327 0.052
102 259671_at AT1G52290 AtPERK15, proline-rich extensin-like receptor kinase 15, PERK15, proline-rich extensin-like receptor kinase 15 -0.319 0.006
103 264998_at AT1G67330 unknown -0.316 0.006
104 260225_at AT1G74590 ATGSTU10, GLUTATHIONE S-TRANSFERASE TAU 10, GSTU10, glutathione S-transferase TAU 10 -0.310 0.130
105 257774_at AT3G29250 AtSDR4, SDR4, short-chain dehydrogenase reductase 4 -0.309 0.137
106 260568_at AT2G43570 CHI, chitinase, putative -0.298 0.252
107 259553_x_at AT1G21310 ATEXT3, extensin 3, EXT3, extensin 3, RSH, ROOT-SHOOT-HYPOCOTYL DEFECTIVE -0.293 0.046
108 255822_at AT2G40610 ATEXP8, ATEXPA8, expansin A8, ATHEXP ALPHA 1.11, EXP8, EXPA8, expansin A8 -0.288 -0.065
109 255503_at AT4G02420 LecRK-IV.4, L-type lectin receptor kinase IV.4 -0.288 0.022
110 255627_at AT4G00955 unknown -0.288 -0.052
111 251232_at AT3G62780 [Calcium-dependent lipid-binding (CaLB domain) family protein] -0.285 0.049
112 253842_at AT4G27860 MEB1, MEMBRANE OF ER BODY 1 -0.282 -0.027
113 264240_at AT1G54820 [Protein kinase superfamily protein] -0.274 -0.057
114 248908_at AT5G45800 MEE62, maternal effect embryo arrest 62 -0.272 0.019
115 265189_at AT1G23840 unknown -0.272 0.016
116 257745_at AT3G29240 unknown -0.261 -0.013
117 256100_at AT1G13750 [Purple acid phosphatases superfamily protein] -0.255 0.022
118 259472_at AT1G18910 [zinc ion binding] -0.247 -0.035
119 256962_at AT3G13560 [O-Glycosyl hydrolases family 17 protein] -0.247 0.053
120 261481_at AT1G14260 [RING/FYVE/PHD zinc finger superfamily protein] -0.246 -0.024
121 266292_at AT2G29350 SAG13, senescence-associated gene 13 -0.242 -0.031
122 258942_at AT3G09960 [Calcineurin-like metallo-phosphoesterase superfamily protein] -0.241 0.049
123 247604_at AT5G60950 COBL5, COBRA-like protein 5 precursor -0.237 0.028
124 262942_at AT1G79450 ALIS5, ALA-interacting subunit 5 -0.231 0.026
125 253238_at AT4G34480 [O-Glycosyl hydrolases family 17 protein] -0.229 0.082
126 262768_at AT1G12990 [beta-1,4-N-acetylglucosaminyltransferase family protein] -0.227 -0.043
127 254832_at AT4G12490 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.225 -0.022