4.0:Information of module
16C 4hs
In comparison with CCA1-ox 6am non-polysomal help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0046283 anthocyanin-containing compound metaboli... BP 8.129e-08
GO:0009718 anthocyanin-containing compound biosynth... BP 5.303e-07
GO:0009812 flavonoid metabolic process BP 7.058e-07
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0009697 salicylic acid biosynthetic process BP 1.558e-05
GO:0031348 negative regulation of defense response BP 1.753e-05
GO:0046189 phenol-containing compound biosynthetic ... BP 2.004e-05
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
16C 4hs		 Log2 signal ratio
CCA1-ox 6am non-polysomal
1 264511_at AT1G09350 AtGolS3, galactinol synthase 3, GolS3, galactinol synthase 3 0.480 0.002
2 256924_at AT3G29590 AT5MAT 0.378 0.306
3 249215_at AT5G42800 DFR, dihydroflavonol 4-reductase, M318, TT3 0.337 -0.254
4 261569_at AT1G01060 LHY, LATE ELONGATED HYPOCOTYL, LHY1, LATE ELONGATED HYPOCOTYL 1 0.320 -0.072
5 250794_at AT5G05270 AtCHIL, CHIL, chalcone isomerase like 0.319 0.132
6 259364_at AT1G13260 EDF4, ETHYLENE RESPONSE DNA BINDING FACTOR 4, RAV1, related to ABI3/VP1 1 0.297 0.235
7 246103_at AT5G28640 AN3, ANGUSTIFOLIA 3, ATGIF1, ARABIDOPSIS GRF1-INTERACTING FACTOR 1, GIF, GRF1-INTERACTING FACTOR, GIF1, GRF1-INTERACTING FACTOR 1 0.296 -0.095
8 256627_at AT3G19970 [alpha/beta-Hydrolases superfamily protein] 0.259 0.029
9 262321_at AT1G27570 [phosphatidylinositol 3- and 4-kinase family protein] 0.258 -0.082
10 252077_at AT3G51720 unknown 0.234 0.251
11 259333_at AT3G03810 EDA30, embryo sac development arrest 30 0.218 -0.158
12 258560_at AT3G06020 FAF4, FANTASTIC FOUR 4 0.215 0.126
13 254349_at AT4G22250 [RING/U-box superfamily protein] 0.212 -0.054
14 254563_at AT4G19120 ERD3, early-responsive to dehydration 3 0.201 0.040
15 254578_at AT4G19410 [Pectinacetylesterase family protein] 0.198 -0.031
16 263258_at AT1G10540 ATNAT8, NAT8, nucleobase-ascorbate transporter 8 0.191 0.125
17 245570_at AT4G14670 CLPB2, casein lytic proteinase B2 0.190 -0.093
18 247057_at AT5G66770 [GRAS family transcription factor] 0.182 -0.005
19 248380_at AT5G51820 ATPGMP, ARABIDOPSIS THALIANA PHOSPHOGLUCOMUTASE, PGM, phosphoglucomutase, PGM1, STF1, STARCH-FREE 1 0.179 -0.021
20 245998_at AT5G20830 ASUS1, atsus1, SUS1, sucrose synthase 1 0.174 0.033
21 253323_at AT4G33920 APD5, Arabidopsis Pp2c clade D 5 0.166 0.151
22 253252_at AT4G34740 ASE2, GLN phosphoribosyl pyrophosphate amidotransferase 2, ATASE2, GLN phosphoribosyl pyrophosphate amidotransferase 2, ATPURF2, CIA1, CHLOROPLAST IMPORT APPARATUS 1, DOV1, DIFFERENTIAL DEVELOPMENT OF VASCULAR ASSOCIATED CELLS 0.164 0.412
23 258429_at AT3G16620 ATTOC120, ARABIDOPSIS THALIANA TRANSLOCON OUTER COMPLEX PROTEIN 120, TOC120, translocon outer complex protein 120 0.161 -0.066
24 256577_at AT3G28220 [TRAF-like family protein] 0.156 0.009
25 251052_at AT5G02470 DPA 0.154 0.134
26 263119_at AT1G03110 AtTRM82, TRM82, tRNA modification 82 0.154 -0.212
27 266820_at AT2G44940 [Integrase-type DNA-binding superfamily protein] 0.150 -0.126
28 254574_at AT4G19430 unknown -0.755 -0.110
29 256245_at AT3G12580 ATHSP70, ARABIDOPSIS HEAT SHOCK PROTEIN 70, HSP70, heat shock protein 70 -0.743 -0.018
30 252345_at AT3G48640 unknown -0.719 -0.026
31 248169_at AT5G54610 ANK, ankyrin, BDA1, bian da 2 (becoming big in Chinese) -0.666 -0.083
32 248657_at AT5G48570 ATFKBP65, FKBP65, ROF2 -0.465 0.078
33 265837_at AT2G14560 LURP1, LATE UPREGULATED IN RESPONSE TO HYALOPERONOSPORA PARASITICA -0.451 -0.001
34 249754_at AT5G24530 DMR6, DOWNY MILDEW RESISTANT 6 -0.393 0.023
35 259705_at AT1G77450 anac032, NAC domain containing protein 32, NAC032, NAC domain containing protein 32 -0.319 -0.132
36 251986_at AT3G53310 [AP2/B3-like transcriptional factor family protein] -0.316 -0.089
37 253776_at AT4G28390 AAC3, ADP/ATP carrier 3, ATAAC3 -0.310 0.151
38 267246_at AT2G30250 ATWRKY25, WRKY25, WRKY DNA-binding protein 25 -0.268 0.128
39 255595_at AT4G01700 [Chitinase family protein] -0.254 -0.051
40 255148_at AT4G08470 MAPKKK10, MEKK3, MAPK/ERK kinase kinase 3 -0.248 -0.030
41 246789_at AT5G27600 ATLACS7, LACS7, long-chain acyl-CoA synthetase 7 -0.248 -0.052
42 254948_at AT4G11000 [Ankyrin repeat family protein] -0.247 0.001
43 250304_at AT5G12110 [Glutathione S-transferase, C-terminal-like] -0.244 -0.097
44 246380_at AT1G57750 CYP96A15, cytochrome P450, family 96, subfamily A, polypeptide 15, MAH1, MID-CHAIN ALKANE HYDROXYLASE 1 -0.227 -0.234
45 261221_at AT1G19960 unknown -0.216 0.019
46 261032_at AT1G17430 [alpha/beta-Hydrolases superfamily protein] -0.210 0.059
47 252281_at AT3G49320 [Metal-dependent protein hydrolase] -0.209 -0.068
48 253911_at AT4G27300 [S-locus lectin protein kinase family protein] -0.198 0.112
49 248330_at AT5G52810 [NAD(P)-binding Rossmann-fold superfamily protein] -0.184 0.047
50 245052_at AT2G26440 PME12, pectin methylesterase 12 -0.183 -0.034
51 249867_at AT5G23020 IMS2, 2-isopropylmalate synthase 2, MAM-L, METHYLTHIOALKYMALATE SYNTHASE-LIKE, MAM3 -0.173 -0.108
52 265665_at AT2G27420 [Cysteine proteinases superfamily protein] -0.171 -0.157
53 253377_at AT4G33300 ADR1-L1, ADR1-like 1 -0.171 0.014
54 248210_at AT5G54000 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] -0.170 0.044