4.0:Information of module
30m light
In comparison with seedlings-week-old RECA1-overexpressing transgenic help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0010264 myo-inositol hexakisphosphate biosynthet... BP 2.536e-11
GO:0032958 inositol phosphate biosynthetic process BP 2.536e-11
GO:0033517 myo-inositol hexakisphosphate metabolic ... BP 2.536e-11
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0009719 response to endogenous stimulus BP 4.270e-09
GO:1901700 response to oxygen-containing compound BP 6.580e-09
GO:0042221 response to chemical BP 1.614e-08
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
30m light		 Log2 signal ratio
seedlings-week-old RECA1-overexpressing transgenic
1 265665_at AT2G27420 [Cysteine proteinases superfamily protein] 0.877 -0.259
2 259432_at AT1G01520 ASG4, ALTERED SEED GERMINATION 4 0.709 -0.087
3 247323_at AT5G64170 LNK1, night light-inducible and clock-regulated 1 0.596 -0.070
4 257262_at AT3G21890 BBX31, B-box domain protein 31 0.580 -0.223
5 264217_at AT1G60190 AtPUB19, PUB19, plant U-box 19 0.543 -0.038
6 254016_at AT4G26150 CGA1, cytokinin-responsive gata factor 1, GATA22, GATA TRANSCRIPTION FACTOR 22, GNL, GNC-LIKE 0.398 0.087
7 260380_at AT1G73870 BBX16, B-box domain protein 16, COL7, CONSTANS-LIKE 7 0.369 -0.186
8 252429_at AT3G47500 CDF3, cycling DOF factor 3 0.334 -0.144
9 249191_at AT5G42760 [Leucine carboxyl methyltransferase] 0.324 -0.250
10 252010_at AT3G52740 unknown 0.317 -0.232
11 265892_at AT2G15020 unknown 0.308 -0.568
12 253496_at AT4G31870 ATGPX7, GLUTATHIONE PEROXIDASE 7, GPX7, glutathione peroxidase 7 0.305 -0.272
13 255795_at AT2G33380 AtCLO3, Arabidopsis thaliana caleosin 3, CLO-3, caleosin 3, CLO3, caleosin 3, RD20, RESPONSIVE TO DESSICATION 20 0.288 0.035
14 257081_at AT3G30460 [RING/U-box superfamily protein] 0.287 -0.163
15 251586_at AT3G58070 GIS, GLABROUS INFLORESCENCE STEMS 0.284 -0.186
16 249383_at AT5G39860 BHLH136, BASIC HELIX-LOOP-HELIX PROTEIN 136, BNQ1, BANQUO 1, PRE1, PACLOBUTRAZOL RESISTANCE1 0.280 -0.452
17 258677_at AT3G08730 ATPK1, ARABIDOPSIS THALIANA PROTEIN-SERINE KINASE 1, ATPK6, ARABIDOPSIS THALIANA PROTEIN-SERINE KINASE 6, ATS6K1, PK1, protein-serine kinase 1, PK6, ROTEIN-SERINE KINASE 6, S6K1, P70 RIBOSOMAL S6 KINASE 0.269 -0.025
18 257135_at AT3G12900 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] 0.269 -0.027
19 266321_at AT2G46660 CYP78A6, cytochrome P450, family 78, subfamily A, polypeptide 6, EOD3, enhancer of da1-1 0.261 -0.140
20 253382_at AT4G33040 [Thioredoxin superfamily protein] 0.246 0.106
21 255604_at AT4G01080 TBL26, TRICHOME BIREFRINGENCE-LIKE 26 0.241 -0.185
22 251272_at AT3G61890 ATHB-12, homeobox 12, ATHB12, ARABIDOPSIS THALIANA HOMEOBOX 12, HB-12, homeobox 12 0.239 0.083
23 250696_at AT5G06790 unknown 0.235 -0.304
24 247293_at AT5G64510 TIN1, tunicamycin induced 1 0.228 0.751
25 257607_at AT3G13880 [Tetratricopeptide repeat (TPR)-like superfamily protein] 0.225 -0.075
26 250985_at AT5G02830 [Tetratricopeptide repeat (TPR)-like superfamily protein] 0.223 -0.229
27 250149_at AT5G14700 [NAD(P)-binding Rossmann-fold superfamily protein] 0.221 -0.099
28 245982_at AT5G13170 AtSWEET15, SAG29, senescence-associated gene 29, SWEET15 0.220 -0.148
29 258742_at AT3G05800 AIF1, AtBS1(activation-tagged BRI1 suppressor 1)-interacting factor 1 0.217 -0.238
30 264444_at AT1G27360 SPL11, squamosa promoter-like 11 0.211 -0.087
31 256999_at AT3G14200 [Chaperone DnaJ-domain superfamily protein] 0.208 -0.069
32 251811_at AT3G54990 SMZ, SCHLAFMUTZE 0.207 0.049
33 262050_at AT1G80130 [Tetratricopeptide repeat (TPR)-like superfamily protein] 0.203 0.451
34 257456_at AT2G18120 SRS4, SHI-related sequence 4 0.199 -0.162
35 251869_at AT3G54500 LNK2, night light-inducible and clock-regulated 2 0.194 -0.084
36 257876_at AT3G17130 [Plant invertase/pectin methylesterase inhibitor superfamily protein] 0.185 -0.161
37 247118_at AT5G65890 ACR1, ACT domain repeat 1 0.183 -0.315
38 248286_at AT5G52870 MAKR5, MEMBRANE-ASSOCIATED KINASE REGULATOR 5 0.178 0.019
39 251259_at AT3G62260 [Protein phosphatase 2C family protein] 0.177 0.270
40 262705_at AT1G16260 [Wall-associated kinase family protein] 0.175 0.111
41 262164_at AT1G78070 [Transducin/WD40 repeat-like superfamily protein] 0.168 -0.227
42 265039_at AT1G04000 unknown 0.163 -0.064
43 260335_at AT1G74000 SS3, strictosidine synthase 3 0.156 -0.039
44 259076_at AT3G02140 AFP4, ABI FIVE BINDING PROTEIN 4, TMAC2, TWO OR MORE ABRES-CONTAINING GENE 2 0.152 0.320
45 250164_at AT5G15280 [Pentatricopeptide repeat (PPR) superfamily protein] 0.152 0.001
46 255672_at AT4G00310 EDA8, EMBRYO SAC DEVELOPMENT ARREST 8, MEE46, MATERNAL EFFECT EMBRYO ARREST 46 0.151 -0.026
47 251372_at AT3G60520 unknown 0.150 -0.040
48 251727_at AT3G56290 unknown 0.150 -0.107
49 254954_at AT4G10910 unknown -0.673 -0.030
50 258468_at AT3G06070 unknown -0.664 0.113
51 265724_at AT2G32100 ATOFP16, RABIDOPSIS THALIANA OVATE FAMILY PROTEIN 16, OFP16, ovate family protein 16 -0.655 -0.138
52 247540_at AT5G61590 [Integrase-type DNA-binding superfamily protein] -0.638 0.062
53 260287_at AT1G80440 KFB20, Kelch repeat F-box 20, KMD1, KISS ME DEADLY 1 -0.631 0.107
54 252367_at AT3G48360 ATBT2, BT2, BTB and TAZ domain protein 2 -0.618 0.105
55 262986_at AT1G23390 [Kelch repeat-containing F-box family protein] -0.509 -0.047
56 265387_at AT2G20670 unknown -0.474 0.062
57 251443_at AT3G59940 KFB50, Kelch repeat F-box 50, KMD4, KISS ME DEADLY 4 -0.433 0.010
58 247524_at AT5G61440 ACHT5, atypical CYS HIS rich thioredoxin 5 -0.418 0.004
59 263981_at AT2G42870 HLH1, HELIX-LOOP-HELIX 1, PAR1, PHY RAPIDLY REGULATED 1 -0.389 0.005
60 255742_at AT1G25560 AtTEM1, EDF1, ETHYLENE RESPONSE DNA BINDING FACTOR 1, TEM1, TEMPRANILLO 1 -0.381 0.137
61 260011_at AT1G68110 [ENTH/ANTH/VHS superfamily protein] -0.380 0.073
62 245757_at AT1G35140 EXL1, EXORDIUM like 1, PHI-1, PHOSPHATE-INDUCED 1 -0.375 0.382
63 259787_at AT1G29460 SAUR65, SMALL AUXIN UPREGULATED RNA 65 -0.368 -0.293
64 257381_at AT2G37950 [RING/FYVE/PHD zinc finger superfamily protein] -0.356 0.017
65 247474_at AT5G62280 unknown -0.350 0.127
66 253061_at AT4G37610 BT5, BTB and TAZ domain protein 5 -0.337 0.037
67 247925_at AT5G57560 TCH4, Touch 4, XTH22, xyloglucan endotransglucosylase/hydrolase 22 -0.319 0.231
68 254193_at AT4G23870 unknown -0.315 0.242
69 249862_at AT5G22920 [CHY-type/CTCHY-type/RING-type Zinc finger protein] -0.304 0.091
70 245906_at AT5G11070 unknown -0.284 -0.031
71 263953_at AT2G36050 ATOFP15, ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 15, OFP15, ovate family protein 15 -0.280 -0.004
72 247029_at AT5G67190 DEAR2, DREB and EAR motif protein 2 -0.278 -0.024
73 258225_at AT3G15630 unknown -0.274 0.025
74 260266_at AT1G68520 BBX14, B-box domain protein 14 -0.267 0.045
75 260037_at AT1G68840 AtRAV2, EDF2, ETHYLENE RESPONSE DNA BINDING FACTOR 2, RAP2.8, RELATED TO AP2 8, RAV2, related to ABI3/VP1 2, TEM2, TEMPRANILLO 2 -0.264 0.102
76 255734_at AT1G25550 [myb-like transcription factor family protein] -0.248 0.133
77 263688_at AT1G26920 unknown -0.242 -0.079
78 260856_at AT1G21910 DREB26, dehydration response element-binding protein 26 -0.239 0.276
79 266745_at AT2G02950 PKS1, phytochrome kinase substrate 1 -0.238 0.068
80 260431_at AT1G68190 BBX27, B-box domain protein 27 -0.233 -0.092
81 250455_at AT5G09980 PROPEP4, elicitor peptide 4 precursor -0.232 0.008
82 255037_at AT4G09460 AtMYB6, myb domain protein 6, MYB6, myb domain protein 6 -0.227 0.034
83 250582_at AT5G07580 [Integrase-type DNA-binding superfamily protein] -0.227 0.050
84 247585_at AT5G60680 unknown -0.227 0.016
85 250481_at AT5G10310 unknown -0.218 0.093
86 249493_at AT5G39080 [HXXXD-type acyl-transferase family protein] -0.217 -0.014
87 255232_at AT4G05330 AGD13, ARF-GAP domain 13 -0.212 -0.127
88 259104_at AT3G02170 LNG2, LONGIFOLIA2, TRM1, TON1 Recruiting Motif 1 -0.210 0.095
89 248177_at AT5G54630 [zinc finger protein-related] -0.207 -0.070
90 263151_at AT1G54120 unknown -0.206 -0.030
91 253317_at AT4G33960 unknown -0.206 -0.087
92 249008_at AT5G44680 [DNA glycosylase superfamily protein] -0.202 -0.033
93 245276_at AT4G16780 ATHB-2, homeobox protein 2, ATHB2, ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 2, HAT4, HB-2, homeobox protein 2 -0.197 0.370
94 257506_at AT1G29440 SAUR63, SMALL AUXIN UP RNA 63 -0.197 -0.100
95 259773_at AT1G29500 SAUR66, SMALL AUXIN UPREGULATED RNA 66 -0.187 -0.082