4.0:Information of module
15m light
In comparison with CCA1-ox 6am non-polysomal help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0009734 auxin-activated signaling pathway BP 1.297e-03
GO:0071365 cellular response to auxin stimulus BP 1.938e-03
GO:0010224 response to UV-B BP 2.047e-03
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:1901700 response to oxygen-containing compound BP 1.885e-04
GO:0032259 methylation BP 3.114e-04
GO:0043414 macromolecule methylation BP 7.706e-04
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
15m light		 Log2 signal ratio
CCA1-ox 6am non-polysomal
1 257262_at AT3G21890 BBX31, B-box domain protein 31 0.236 -0.015
2 267190_at AT2G44170 ATNMT2, ARABIDOPSIS N-MYRISTOYLTRANSFERASE 2, NMT2, N-myristoyltransferase 2 0.190 -0.003
3 266333_at AT2G32410 AXL, AXR1-like, AXL1, AXR1- like 1 0.154 0.022
4 257607_at AT3G13880 [Tetratricopeptide repeat (TPR)-like superfamily protein] 0.152 -0.135
5 259834_at AT1G69570 [Dof-type zinc finger DNA-binding family protein] 0.142 0.018
6 267225_at AT2G44000 [Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family] 0.141 -0.004
7 264041_at AT2G03710 AGL3, AGAMOUS-like 3, SEP4, SEPALLATA 4 0.138 0.048
8 261587_at AT1G01660 [RING/U-box superfamily protein] 0.136 0.061
9 265147_at AT1G51380 [DEA(D/H)-box RNA helicase family protein] 0.135 0.016
10 262268_at AT1G42410 [CACTA-like transposase family (Ptta/En/Spm), has a 1.0e-124 P-value blast match to At5g36655.1/81-333 CACTA-like transposase family (Ptta/En/Spm) (CACTA-element) (Arabidopsis thaliana)] 0.129 -0.156
11 254556_at AT4G19220 [Tetratricopeptide repeat (TPR)-like superfamily protein] 0.127 0.041
12 245826_at AT1G57850 [Toll-Interleukin-Resistance (TIR) domain family protein] 0.121 -0.268
13 254440_at AT4G21020 [Late embryogenesis abundant protein (LEA) family protein] 0.118 -0.064
14 265728_at AT2G31990 [Exostosin family protein] 0.117 0.196
15 247756_at AT5G59100 [Subtilisin-like serine endopeptidase family protein] 0.117 0.807
16 255612_at AT4G01240 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] 0.106 -0.178
17 259774_at AT1G29520 [AWPM-19-like family protein] 0.100 -0.024
18 250010_at AT5G18450 [Integrase-type DNA-binding superfamily protein] 0.098 -0.039
19 250082_at AT5G17200 [Pectin lyase-like superfamily protein] 0.097 0.017
20 257135_at AT3G12900 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] 0.092 0.283
21 254006_at AT4G26340 [F-box/RNI-like/FBD-like domains-containing protein] 0.089 -0.021
22 259531_at AT1G12460 [Leucine-rich repeat protein kinase family protein] 0.087 -0.131
23 250043_at AT5G18430 [GDSL-like Lipase/Acylhydrolase superfamily protein] 0.087 0.076
24 263458_at AT2G22290 ATRAB-H1D, ARABIDOPSIS RAB GTPASE HOMOLOG H1D, ATRAB6, ARABIDOPSIS RAB GTPASE HOMOLOG 6, ATRABH1D, RAB GTPase homolog H1D, RAB-H1D, RAB GTPASE HOMOLOG H1D, RABH1d, RAB GTPase homolog H1D 0.087 -0.068
25 261289_at AT1G37000 [Beta-galactosidase related protein] 0.084 0.167
26 254744_at AT4G13345 MEE55, maternal effect embryo arrest 55 0.084 0.004
27 259787_at AT1G29460 SAUR65, SMALL AUXIN UPREGULATED RNA 65 -0.318 -0.055
28 247540_at AT5G61590 [Integrase-type DNA-binding superfamily protein] -0.261 -0.137
29 259773_at AT1G29500 SAUR66, SMALL AUXIN UPREGULATED RNA 66 -0.228 0.101
30 256914_at AT3G23880 [F-box and associated interaction domains-containing protein] -0.228 -0.091
31 266259_at AT2G27830 unknown -0.219 0.053
32 247189_at AT5G65390 AGP7, arabinogalactan protein 7 -0.215 -0.007
33 249854_at AT5G22960 [alpha/beta-Hydrolases superfamily protein] -0.188 0.050
34 251443_at AT3G59940 KFB50, Kelch repeat F-box 50, KMD4, KISS ME DEADLY 4 -0.187 -0.140
35 245329_at AT4G14365 XBAT34, XB3 ortholog 4 in Arabidopsis thaliana -0.184 0.082
36 256977_at AT3G21040 [copia-like retrotransposon family, has a 5.7e-20 P-value blast match to gb|AAO73527.1| gag-pol polyprotein (Glycine max) (SIRE1) (Ty1_Copia-family)] -0.181 -0.232
37 247925_at AT5G57560 TCH4, Touch 4, XTH22, xyloglucan endotransglucosylase/hydrolase 22 -0.172 -0.209
38 263584_at AT2G17040 anac036, NAC domain containing protein 36, NAC036, NAC domain containing protein 36 -0.170 0.146
39 263475_at AT2G31945 unknown -0.152 0.041
40 249976_at AT5G18810 At-SCL28, SC35-like splicing factor 28, SCL28, SC35-like splicing factor 28 -0.149 0.109
41 267460_at AT2G33810 SPL3, squamosa promoter binding protein-like 3 -0.134 -0.046
42 265718_at AT2G03340 WRKY3, WRKY DNA-binding protein 3 -0.118 -0.261
43 257645_at AT3G25790 [myb-like transcription factor family protein] -0.117 -0.003
44 247800_at AT5G58570 unknown -0.116 0.062
45 264774_at AT1G22890 unknown -0.115 -0.122
46 260035_at AT1G68850 [Peroxidase superfamily protein] -0.112 -0.094
47 267255_at AT2G22950 ACA7, auto-regulated Ca2+-ATPase 7 -0.110 -0.149
48 246203_at AT4G36610 [alpha/beta-Hydrolases superfamily protein] -0.107 -0.060
49 257469_at AT1G49290 unknown -0.107 0.010
50 260256_at AT1G74350 [Intron maturase, type II family protein] -0.105 0.072
51 260366_at AT1G70460 AtPERK13, proline-rich extensin-like receptor kinase 13, PERK13, proline-rich extensin-like receptor kinase 13, RHS10, root hair specific 10 -0.104 0.158