4.0:Information of module
8h-DC3000 hrpA
In comparison with 21h-DC3000 hrpA help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0009611 response to wounding BP 6.950e-07
GO:0009694 jasmonic acid metabolic process BP 1.195e-05
GO:0009695 jasmonic acid biosynthetic process BP 1.319e-05
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0001510 RNA methylation BP 4.312e-13
GO:0006412 translation BP 1.746e-10
GO:0009451 RNA modification BP 1.825e-10
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
8h-DC3000 hrpA		 Log2 signal ratio
21h-DC3000 hrpA
1 263486_at AT2G22200 [Integrase-type DNA-binding superfamily protein] 0.233 -0.299
2 258427_at AT3G16600 [SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related] 0.186 -0.042
3 254996_at AT4G10390 [Protein kinase superfamily protein] 0.145 -0.262
4 264527_at AT1G30760 [FAD-binding Berberine family protein] 0.144 0.050
5 261366_at AT1G53100 [Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein] 0.136 -0.032
6 253103_at AT4G36110 SAUR9, SMALL AUXIN UPREGULATED RNA 9 0.129 -0.153
7 251875_at AT3G54270 [sucrose-6F-phosphate phosphohydrolase family protein] 0.123 0.009
8 262446_at AT1G49310 unknown 0.115 -0.064
9 254881_at AT4G11700 unknown 0.114 0.038
10 249449_at AT5G39430 unknown 0.113 0.060
11 251501_at AT3G59120 [Cysteine/Histidine-rich C1 domain family protein] 0.110 -0.096
12 260361_at AT1G69360 unknown 0.109 -0.125
13 251298_at AT3G62040 [Haloacid dehalogenase-like hydrolase (HAD) superfamily protein] 0.109 0.002
14 262061_at AT1G80110 ATPP2-B11, phloem protein 2-B11, PP2-B11, phloem protein 2-B11 0.108 -0.042
15 247970_at AT5G56720 c-NAD-MDH3, cytosolic-NAD-dependent malate dehydrogenase 3 0.105 -0.099
16 265859_at AT2G01700 unknown 0.105 -0.073
17 254339_at AT4G22100 BGLU3, beta glucosidase 2 0.100 -0.004
18 255204_at AT4G07530 unknown 0.098 -0.025
19 246183_at AT5G20940 [Glycosyl hydrolase family protein] 0.098 0.000
20 260770_at AT1G49200 [RING/U-box superfamily protein] -0.171 0.002
21 253067_at AT4G37780 ATMYB87, MYB87, myb domain protein 87 -0.146 -0.046
22 257506_at AT1G29440 SAUR63, SMALL AUXIN UP RNA 63 -0.143 0.031
23 252238_at AT3G49960 [Peroxidase superfamily protein] -0.129 -0.042
24 264357_at AT1G03360 ATRRP4, ribosomal RNA processing 4, RRP4, ribosomal RNA processing 4 -0.121 0.082
25 255149_at AT4G08150 BP, BREVIPEDICELLUS, BP1, BREVIPEDICELLUS 1, KNAT1, KNOTTED-like from Arabidopsis thaliana -0.115 -0.071
26 259760_at AT1G77580 unknown -0.114 0.009
27 253736_at AT4G28780 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.108 0.140
28 251079_at AT5G02000 unknown -0.106 -0.070
29 249546_at AT5G38150 PMI15, plastid movement impaired 15 -0.102 0.026
30 257931_at AT3G17030 [Nucleic acid-binding proteins superfamily] -0.099 0.058
31 253802_at AT4G28180 unknown -0.098 0.022
32 249186_at AT5G43040 [Cysteine/Histidine-rich C1 domain family protein] -0.097 0.063
33 267371_at AT2G44510 [CDK inhibitor P21 binding protein] -0.092 0.079
34 247980_at AT5G56860 GATA21, GATA TRANSCRIPTION FACTOR 21, GNC, GATA, nitrate-inducible, carbon metabolism-involved -0.091 0.042
35 250674_at AT5G07130 LAC13, laccase 13 -0.090 -0.021
36 250022_at AT5G18210 [NAD(P)-binding Rossmann-fold superfamily protein] -0.085 -0.050
37 246834_at AT5G26630 [MADS-box transcription factor family protein] -0.083 -0.078