4.0:Information of module
mutant-line348
In comparison with Red Light 45min  help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0071840 cellular component organization or bioge... BP 5.433e-08
GO:0006090 pyruvate metabolic process BP 6.597e-08
GO:0044085 cellular component biogenesis BP 2.257e-06
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0050801 ion homeostasis BP 2.241e-04
GO:0048878 chemical homeostasis BP 1.092e-03
GO:0098771 inorganic ion homeostasis BP 2.415e-03
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
mutant-line348		 Log2 signal ratio
Red Light 45min
1 250979_at AT5G03090 unknown 0.284 0.008
2 251861_at AT3G54810 BME3, BLUE MICROPYLAR END 3, BME3-ZF, BLUE MICROPYLAR END 3-ZINC FINGER, GATA8, GATA TRANSCRIPTION FACTOR 8 0.198 0.003
3 254550_at AT4G19690 ATIRT1, ARABIDOPSIS IRON-REGULATED TRANSPORTER 1, IRT1, iron-regulated transporter 1 0.188 -0.014
4 255340_at AT4G04490 CRK36, cysteine-rich RLK (RECEPTOR-like protein kinase) 36 0.178 -0.049
5 254976_at AT4G10510 [Subtilase family protein] 0.154 -0.033
6 245312_at AT4G14600 [Target SNARE coiled-coil domain protein] 0.142 -0.023
7 266967_at AT2G39530 [Uncharacterised protein family (UPF0497)] 0.138 -0.055
8 263970_at AT2G42850 CYP718, cytochrome P450, family 718 0.131 0.019
9 249860_at AT5G22860 [Serine carboxypeptidase S28 family protein] 0.119 0.046
10 262475_at AT1G50340 [Plant invertase/pectin methylesterase inhibitor superfamily protein] 0.118 -0.007
11 253936_at AT4G26880 [Stigma-specific Stig1 family protein] 0.118 -0.034
12 257896_at AT3G16920 ATCTL2, CTL2, chitinase-like protein 2 0.117 -0.003
13 263840_at AT2G36885 unknown 0.112 0.019
14 247769_at AT5G58910 LAC16, laccase 16 0.110 -0.034
15 263150_at AT1G54050 [HSP20-like chaperones superfamily protein] 0.106 0.107
16 259730_at AT1G77660 [Histone H3 K4-specific methyltransferase SET7/9 family protein] 0.106 0.024
17 257217_at AT3G14940 ATPPC3, phosphoenolpyruvate carboxylase 3, PPC3, phosphoenolpyruvate carboxylase 3 0.105 -0.041
18 266409_at AT2G38510 [MATE efflux family protein] 0.102 -0.006
19 255410_at AT4G03100 [Rho GTPase activating protein with PAK-box/P21-Rho-binding domain] 0.100 0.062
20 258115_at AT3G14670 unknown 0.100 -0.021
21 255582_at AT4G01500 NGA4, NGATHA4 0.099 -0.008
22 246569_at AT5G14980 [alpha/beta-Hydrolases superfamily protein] 0.098 -0.026
23 263376_at AT2G20520 FLA6, FASCICLIN-like arabinogalactan 6 0.098 0.017
24 255333_at AT4G04410 [copia-like retrotransposon family, has a 1.7e-176 P-value blast match to dbj|BAA78426.1| polyprotein (AtRE2-1) (Arabidopsis thaliana) (Ty1_Copia-element)] -0.407 -0.017
25 249485_at AT5G39020 [Malectin/receptor-like protein kinase family protein] -0.154 -0.007
26 261027_at AT1G01340 ACBK1, ATCNGC10, cyclic nucleotide gated channel 10, CNGC10, cyclic nucleotide gated channel 10 -0.139 -0.014
27 260012_at AT1G67865 unknown -0.137 0.011
28 249486_at AT5G39030 [Protein kinase superfamily protein] -0.137 -0.010
29 251746_at AT3G56060 [Glucose-methanol-choline (GMC) oxidoreductase family protein] -0.126 0.013
30 252414_at AT3G47420 AtG3Pp1, Glycerol-3-phosphate permease 1, ATPS3, phosphate starvation-induced gene 3, G3Pp1, Glycerol-3-phosphate permease 1, PS3, phosphate starvation-induced gene 3 -0.123 -0.111
31 260921_at AT1G21540 [AMP-dependent synthetase and ligase family protein] -0.121 -0.033
32 263909_at AT2G36490 AtROS1, DML1, demeter-like 1, ROS1, REPRESSOR OF SILENCING1 -0.116 0.013
33 249781_at AT5G24250 unknown -0.113 0.004
34 262378_at AT1G72830 ATHAP2C, HAP2C, NF-YA3, nuclear factor Y, subunit A3 -0.112 0.013
35 253982_at AT4G26570 ATCBL3, calcineurin B-like 3, CBL3, calcineurin B-like 3 -0.099 0.011
36 262887_at AT1G14780 [MAC/Perforin domain-containing protein] -0.099 -0.014
37 260378_at AT1G73910 ARP4A, actin-related proteins 4A, ATARP4A, actin-related proteins 4A -0.098 -0.040
38 254779_at AT4G12760 unknown -0.095 0.016
39 245105_at AT2G41610 unknown -0.094 -0.014
40 264455_at AT1G10330 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.091 -0.012
41 262357_at AT1G73040 [Mannose-binding lectin superfamily protein] -0.089 -0.004
42 253776_at AT4G28390 AAC3, ADP/ATP carrier 3, ATAAC3 -0.088 -0.008
43 246439_at AT5G17600 [RING/U-box superfamily protein] -0.086 0.026
44 262928_at AT1G65760 unknown -0.086 -0.004
45 255655_at AT4G00980 [zinc knuckle (CCHC-type) family protein] -0.084 -0.035