4.0:Information of module
toc1-1-77hr
In comparison with Total RNA 35S:HF-RPL18 help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0006950 response to stress BP 4.780e-14
GO:0045087 innate immune response BP 8.945e-12
GO:0006955 immune response BP 1.045e-11
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0043647 inositol phosphate metabolic process BP 1.225e-11
GO:0010264 myo-inositol hexakisphosphate biosynthet... BP 1.481e-11
GO:0032958 inositol phosphate biosynthetic process BP 1.481e-11
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
toc1-1-77hr		 Log2 signal ratio
Total RNA 35S:HF-RPL18
1 249850_at AT5G23240 DJC76, DNA J protein C76 0.809 -0.024
2 256060_at AT1G07050 [CCT motif family protein] 0.774 -0.030
3 249174_at AT5G42900 COR27, cold regulated gene 27 0.733 -0.054
4 257985_at AT3G20810 JMJ30, Jumonji C domain-containing protein 30, JMJD5, jumonji domain containing 5 0.565 -0.024
5 257670_at AT3G20340 unknown 0.508 -0.059
6 259244_at AT3G07650 BBX7, B-box domain protein 7, COL9, CONSTANS-like 9 0.500 0.006
7 247668_at AT5G60100 APRR3, pseudo-response regulator 3, PRR3, pseudo-response regulator 3 0.492 -0.021
8 245319_at AT4G16146 [cAMP-regulated phosphoprotein 19-related protein] 0.472 -0.016
9 262452_at AT1G11210 unknown 0.437 0.012
10 252367_at AT3G48360 ATBT2, BT2, BTB and TAZ domain protein 2 0.435 -0.045
11 267147_at AT2G38240 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] 0.424 -0.136
12 264019_at AT2G21130 [Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein] 0.400 -0.007
13 250194_at AT5G14550 [Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein] 0.329 -0.041
14 247867_at AT5G57630 CIPK21, CBL-interacting protein kinase 21, SnRK3.4, SNF1-RELATED PROTEIN KINASE 3.4 0.306 -0.011
15 264045_at AT2G22450 AtRIBA2, RIBA2, homolog of ribA 2 0.292 0.011
16 259595_at AT1G28050 BBX13, B-box domain protein 13 0.279 -0.026
17 259992_at AT1G67970 AT-HSFA8, HSFA8, heat shock transcription factor A8 0.277 0.049
18 247013_at AT5G67480 ATBT4, BT4, BTB and TAZ domain protein 4 0.271 -0.044
19 246238_at AT4G36670 AtPLT6, AtPMT6, PLT6, polyol transporter 6, PMT6, polyol/monosaccharide transporter 6 0.270 -0.059
20 264574_at AT1G05300 ZIP5, zinc transporter 5 precursor 0.269 0.010
21 245193_at AT1G67810 SUFE2, sulfur E2 0.251 0.062
22 259841_at AT1G52200 [PLAC8 family protein] 0.241 0.088
23 251494_at AT3G59350 [Protein kinase superfamily protein] 0.230 -0.023
24 253627_at AT4G30650 [Low temperature and salt responsive protein family] 0.222 -0.007
25 254948_at AT4G11000 [Ankyrin repeat family protein] 0.222 0.070
26 245668_at AT1G28330 AtDRM1, DRM1, DORMANCY-ASSOCIATED PROTEIN 1, DYL1, dormancy-associated protein-like 1 0.219 -0.058
27 263548_at AT2G21660 ATGRP7, GLYCINE RICH PROTEIN 7, CCR2, cold, circadian rhythm, and rna binding 2, GR-RBP7, GLYCINE-RICH RNA-BINDING PROTEIN 7, GRP7, GLYCINE-RICH RNA-BINDING PROTEIN 7 0.217 -0.003
28 246831_at AT5G26340 ATSTP13, SUGAR TRANSPORT PROTEIN 13, MSS1, STP13, SUGAR TRANSPORT PROTEIN 13 0.214 -0.008
29 256430_at AT3G11020 DREB2, DEHYDRATION-RESPONSIVE ELEMENT BINDING PROTEIN 2, DREB2B, DRE/CRT-binding protein 2B 0.209 0.014
30 245765_at AT1G33600 [Leucine-rich repeat (LRR) family protein] 0.202 -0.028
31 253506_at AT4G31980 unknown 0.199 0.050
32 247937_at AT5G57110 ACA8, autoinhibited Ca2+ -ATPase, isoform 8, AT-ACA8, AUTOINHIBITED CA2+ -ATPASE, ISOFORM 8 0.197 -0.028
33 261318_at AT1G53035 unknown 0.191 0.003
34 264787_at AT2G17840 ERD7, EARLY-RESPONSIVE TO DEHYDRATION 7 0.186 0.023
35 248138_at AT5G54960 PDC2, pyruvate decarboxylase-2 0.185 0.007
36 262296_at AT1G27630 CYCT1;3, cyclin T 1;3 0.181 0.013
37 253747_at AT4G29050 LecRK-V.9, L-type lectin receptor kinase V.9 0.179 -0.038
38 256061_at AT1G07040 unknown 0.179 -0.072
39 251432_at AT3G59820 AtLETM1, LETM1, leucine zipper-EF-hand-containing transmembrane protein 1 0.178 0.067
40 254437_s_at AT3G06433 [pseudogene] 0.178 0.076
41 249977_at AT5G18820 Cpn60alpha2, chaperonin-60alpha2, EMB3007, embryo defective 3007 0.172 0.181
42 247684_at AT5G59670 [Leucine-rich repeat protein kinase family protein] 0.171 0.034
43 250412_at AT5G11150 ATVAMP713, vesicle-associated membrane protein 713, VAMP713, VAMP713, vesicle-associated membrane protein 713 0.170 -0.005
44 252468_at AT3G46970 ATPHS2, Arabidopsis thaliana alpha-glucan phosphorylase 2, PHS2, alpha-glucan phosphorylase 2 0.166 -0.022
45 249586_at AT5G37840 unknown 0.166 -0.048
46 256833_at AT3G22910 [ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein] 0.166 0.020
47 260359_at AT1G69210 [Uncharacterised protein family UPF0090] 0.165 0.114
48 259489_at AT1G15790 unknown 0.164 0.027
49 245998_at AT5G20830 ASUS1, atsus1, SUS1, sucrose synthase 1 0.163 0.032
50 255381_at AT4G03510 ATRMA1, RMA1, RING membrane-anchor 1 0.163 0.020
51 248510_at AT5G50315 [Mutator-like transposase family, has a 5.0e-14 P-value blast match to Q9XE24 /118-277 Pfam PF03108 MuDR family transposase (MuDr-element domain)] 0.162 0.042
52 266668_at AT2G29760 OTP81, ORGANELLE TRANSCRIPT PROCESSING 81 0.161 0.012
53 252320_at AT3G48580 XTH11, xyloglucan endotransglucosylase/hydrolase 11 0.161 0.017
54 251603_at AT3G57760 [Protein kinase superfamily protein] 0.160 -0.000
55 251789_at AT3G55450 PBL1, PBS1-like 1 0.156 0.016
56 253998_at AT4G26010 [Peroxidase superfamily protein] -0.752 0.079
57 254044_at AT4G25820 ATXTH14, XTH14, xyloglucan endotransglucosylase/hydrolase 14, XTR9, xyloglucan endotransglycosylase 9 -0.728 -0.002
58 261157_at AT1G34510 [Peroxidase superfamily protein] -0.607 0.028
59 250778_at AT5G05500 MOP10 -0.582 0.040
60 250801_at AT5G04960 [Plant invertase/pectin methylesterase inhibitor superfamily] -0.578 -0.033
61 246991_at AT5G67400 RHS19, root hair specific 19 -0.561 0.063
62 253667_at AT4G30170 [Peroxidase family protein] -0.533 0.025
63 246652_at AT5G35190 EXT13, extensin 13 -0.509 0.054
64 261562_at AT1G01750 ADF11, actin depolymerizing factor 11 -0.501 -0.061
65 265050_at AT1G52070 [Mannose-binding lectin superfamily protein] -0.474 0.043
66 252833_at AT4G40090 AGP3, arabinogalactan protein 3 -0.466 -0.037
67 260230_at AT1G74500 ATBS1, activation-tagged BRI1(brassinosteroid-insensitive 1)-suppressor 1, bHLH135, basic helix-loop-helix protein 135, BS1, activation-tagged BRI1(brassinosteroid-insensitive 1)-suppressor 1, PRE3, PACLOBUTRAZOL RESISTANCE 3, TMO7, TARGET OF MONOPTEROS 7 -0.433 -0.043
68 256878_at AT3G26460 [Polyketide cyclase/dehydrase and lipid transport superfamily protein] -0.431 -0.032
69 259185_at AT3G01550 ATPPT2, PHOSPHOENOLPYRUVATE (PEP)/PHOSPHATE TRANSLOCATOR 2, PPT2, phosphoenolpyruvate (pep)/phosphate translocator 2 -0.428 0.021
70 249375_at AT5G40730 AGP24, arabinogalactan protein 24, ATAGP24, ARABIDOPSIS THALIANA ARABINOGALACTAN PROTEIN 24 -0.410 -0.067
71 252238_at AT3G49960 [Peroxidase superfamily protein] -0.383 -0.030
72 267260_at AT2G23130 AGP17, arabinogalactan protein 17, ATAGP17 -0.376 -0.057
73 247965_at AT5G56540 AGP14, arabinogalactan protein 14, ATAGP14 -0.356 -0.023
74 248311_at AT5G52570 B2, BCH2, BETA CAROTENOID HYDROXYLASE 2, BETA-OHASE 2, beta-carotene hydroxylase 2, CHY2 -0.355 0.071
75 245172_at AT2G47540 [Pollen Ole e 1 allergen and extensin family protein] -0.337 -0.032
76 247780_at AT5G58770 AtcPT4, cPT4, cis-prenyltransferase 4 -0.336 0.000
77 254746_at AT4G12980 [Auxin-responsive family protein] -0.333 0.051
78 266656_at AT2G25900 ATCTH, ATTZF1, A. THALIANA TANDEM ZINC FINGER PROTEIN 1 -0.328 -0.053
79 246949_at AT5G25140 CYP71B13, cytochrome P450, family 71, subfamily B, polypeptide 13 -0.311 0.054
80 260758_at AT1G48930 AtGH9C1, glycosyl hydrolase 9C1, GH9C1, glycosyl hydrolase 9C1 -0.311 0.005
81 248683_at AT5G48490 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.311 -0.182
82 246540_at AT5G15600 SP1L4, SPIRAL1-like4 -0.302 -0.009
83 245479_at AT4G16140 [proline-rich family protein] -0.298 -0.040
84 264342_at AT1G12080 [Vacuolar calcium-binding protein-related] -0.298 -0.140
85 258003_at AT3G29030 ATEXP5, ARABIDOPSIS THALIANA EXPANSIN 5, ATEXPA5, ARABIDOPSIS THALIANA EXPANSIN A5, ATHEXP ALPHA 1.4, EXP5, EXPANSIN 5, EXPA5, expansin A5 -0.291 0.006
86 264577_at AT1G05260 RCI3, RARE COLD INDUCIBLE GENE 3, RCI3A -0.287 0.034
87 266838_at AT2G25980 [Mannose-binding lectin superfamily protein] -0.286 0.067
88 252011_at AT3G52720 ACA1, alpha carbonic anhydrase 1, ATACA1, A. THALIANA ALPHA CARBONIC ANHYDRASE 1, CAH1, CARBONIC ANHYDRASE 1 -0.281 -0.026
89 246439_at AT5G17600 [RING/U-box superfamily protein] -0.269 -0.005
90 246021_at AT5G21100 [Plant L-ascorbate oxidase] -0.268 0.010
91 266820_at AT2G44940 [Integrase-type DNA-binding superfamily protein] -0.266 0.047
92 256097_at AT1G13670 unknown -0.263 0.005
93 249278_at AT5G41900 [alpha/beta-Hydrolases superfamily protein] -0.261 -0.028
94 253103_at AT4G36110 SAUR9, SMALL AUXIN UPREGULATED RNA 9 -0.253 -0.084
95 259331_at AT3G03840 SAUR27, SMALL AUXIN UP RNA 27 -0.246 -0.065
96 255088_at AT4G09350 CRRJ, CHLORORESPIRATORY REDUCTION J, DJC75, DNA J protein C75, NdhT, NADH dehydrogenase-like complex T -0.245 0.016
97 264271_at AT1G60270 BGLU6, beta glucosidase 6 -0.245 -0.056
98 261958_at AT1G64500 [Glutaredoxin family protein] -0.237 0.101
99 249769_at AT5G24120 ATSIG5, SIGMA FACTOR 5, SIG5, SIGMA FACTOR 5, SIGE, sigma factor E -0.237 0.080
100 254037_at AT4G25760 ATGDU2, glutamine dumper 2, GDU2, glutamine dumper 2 -0.236 0.000
101 250892_at AT5G03760 ATCSLA09, ATCSLA9, CSLA09, CSLA9, CELLULOSE SYNTHASE LIKE A9, RAT4, RESISTANT TO AGROBACTERIUM TRANSFORMATION 4 -0.235 -0.020
102 266391_at AT2G41290 SSL2, strictosidine synthase-like 2 -0.232 0.013
103 254041_at AT4G25830 [Uncharacterised protein family (UPF0497)] -0.227 -0.022
104 262516_at AT1G17190 ATGSTU26, glutathione S-transferase tau 26, GSTU26, glutathione S-transferase tau 26 -0.226 0.014
105 248080_at AT5G55380 [MBOAT (membrane bound O-acyl transferase) family protein] -0.225 0.005
106 258241_at AT3G27650 LBD25, LOB domain-containing protein 25 -0.222 0.054
107 264029_at AT2G03720 MRH6, morphogenesis of root hair 6 -0.221 -0.099
108 263386_at AT2G40150 TBL28, TRICHOME BIREFRINGENCE-LIKE 28 -0.221 -0.028
109 247713_at AT5G59330 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.220 0.034