4.0:Information of module
toc1-1-65hr
In comparison with Roots Cd help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0010264 myo-inositol hexakisphosphate biosynthet... BP 3.786e-09
GO:0033517 myo-inositol hexakisphosphate metabolic ... BP 3.786e-09
GO:0032958 inositol phosphate biosynthetic process BP 5.144e-09
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0010054 trichoblast differentiation BP 2.603e-08
GO:0010053 root epidermal cell differentiation BP 4.365e-08
GO:0010015 root morphogenesis BP 6.338e-08
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
toc1-1-65hr		 Log2 signal ratio
Roots Cd
1 258497_at AT3G02380 ATCOL2, CONSTANS-LIKE 2, BBX3, B-box domain protein 3, COL2, CONSTANS-like 2 0.616 -0.020
2 260116_at AT1G33960 AIG1, AVRRPT2-INDUCED GENE 1 0.521 -0.017
3 259975_at AT1G76470 [NAD(P)-binding Rossmann-fold superfamily protein] 0.503 -0.196
4 262731_at AT1G16420 ATMC8, ARABIDOPSIS THALIANA METACASPASE 8, AtMCP2e, metacaspase 2e, MC8, metacaspase 8, MCP2e, metacaspase 2e 0.469 0.050
5 256319_at AT1G35910 TPPD, trehalose-6-phosphate phosphatase D 0.439 -0.442
6 249197_at AT5G42380 CML37, calmodulin like 37 0.396 -0.525
7 261569_at AT1G01060 LHY, LATE ELONGATED HYPOCOTYL, LHY1, LATE ELONGATED HYPOCOTYL 1 0.370 0.008
8 252511_at AT3G46280 [protein kinase-related] 0.360 -0.048
9 246854_at AT5G26200 [Mitochondrial substrate carrier family protein] 0.356 0.198
10 260406_at AT1G69920 ATGSTU12, ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 12, GSTU12, glutathione S-transferase TAU 12 0.347 -0.472
11 256300_at AT1G69490 ANAC029, Arabidopsis NAC domain containing protein 29, ATNAP, NAC-LIKE, ACTIVATED BY AP3/PI, NAP, NAC-like, activated by AP3/PI 0.330 -0.013
12 260744_at AT1G15010 unknown 0.328 -0.229
13 257185_at AT3G13100 ABCC7, ATP-binding cassette C7, ATMRP7, multidrug resistance-associated protein 7, MRP7, MRP7, multidrug resistance-associated protein 7 0.314 -0.216
14 247064_at AT5G66890 [Leucine-rich repeat (LRR) family protein] 0.312 -0.050
15 256969_at AT3G21080 [ABC transporter-related] 0.307 0.025
16 263252_at AT2G31380 BBX25, B-box domain protein 25, STH, salt tolerance homologue 0.304 0.022
17 249415_at AT5G39660 CDF2, cycling DOF factor 2 0.299 -0.066
18 266363_at AT2G41250 [Haloacid dehalogenase-like hydrolase (HAD) superfamily protein] 0.284 -0.029
19 250099_at AT5G17300 RVE1, REVEILLE 1 0.268 -0.170
20 257373_at AT2G43140 [basic helix-loop-helix (bHLH) DNA-binding superfamily protein] 0.265 -0.037
21 263739_at AT2G21320 BBX18, B-box domain protein 18 0.264 -0.069
22 256169_at AT1G51800 IOS1, IMPAIRED OOMYCETE SUSCEPTIBILITY 1 0.262 -0.102
23 262085_at AT1G56060 unknown 0.262 -0.116
24 266799_at AT2G22860 ATPSK2, phytosulfokine 2 precursor, PSK2, phytosulfokine 2 precursor 0.257 -0.159
25 264756_at AT1G61370 [S-locus lectin protein kinase family protein] 0.255 -0.198
26 262050_at AT1G80130 [Tetratricopeptide repeat (TPR)-like superfamily protein] 0.246 0.019
27 263854_at AT2G04430 atnudt5, nudix hydrolase homolog 5, NUDT5, nudix hydrolase homolog 5 0.245 -0.084
28 263539_at AT2G24850 TAT, TYROSINE AMINOTRANSFERASE, TAT3, tyrosine aminotransferase 3 0.245 -0.141
29 245734_at AT1G73480 [alpha/beta-Hydrolases superfamily protein] 0.243 -0.189
30 261033_at AT1G17380 JAZ5, jasmonate-zim-domain protein 5, TIFY11A 0.236 -0.283
31 247532_at AT5G61560 [U-box domain-containing protein kinase family protein] 0.235 -0.123
32 264866_at AT1G24140 [Matrixin family protein] 0.233 -0.291
33 259511_at AT1G12520 ATCCS, copper chaperone for SOD1, CCS, copper chaperone for SOD1 0.225 0.034
34 248683_at AT5G48490 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] 0.214 0.054
35 252265_at AT3G49620 DIN11, DARK INDUCIBLE 11 0.213 -0.171
36 265668_at AT2G32020 [Acyl-CoA N-acyltransferases (NAT) superfamily protein] 0.205 -0.328
37 253915_at AT4G27280 [Calcium-binding EF-hand family protein] 0.204 -0.258
38 259432_at AT1G01520 ASG4, ALTERED SEED GERMINATION 4 0.202 -0.009
39 249932_at AT5G22390 unknown 0.202 -0.072
40 256147_at AT1G55080 MED9 0.198 -0.125
41 262382_at AT1G72920 [Toll-Interleukin-Resistance (TIR) domain family protein] 0.193 -0.223
42 252917_at AT4G38960 BBX19, B-box domain protein 19 0.193 -0.082
43 247871_at AT5G57530 AtXTH12, XTH12, xyloglucan endotransglucosylase/hydrolase 12 -0.431 0.278
44 266591_at AT2G46225 ABIL1, ABI-1-like 1 -0.371 -0.083
45 250683_x_at AT5G06640 EXT10, extensin 10 -0.323 0.118
46 253684_at AT4G29690 [Alkaline-phosphatase-like family protein] -0.306 0.237
47 247477_at AT5G62340 [Plant invertase/pectin methylesterase inhibitor superfamily protein] -0.293 0.188
48 246797_at AT5G26790 unknown -0.290 0.084
49 254037_at AT4G25760 ATGDU2, glutamine dumper 2, GDU2, glutamine dumper 2 -0.283 -0.012
50 251843_x_at AT3G54590 ATHRGP1, hydroxyproline-rich glycoprotein, HRGP1, hydroxyproline-rich glycoprotein -0.276 0.126
51 263549_at AT2G21650 ATRL2, ARABIDOPSIS RAD-LIKE 2, MEE3, MATERNAL EFFECT EMBRYO ARREST 3, RSM1, RADIALIS-LIKE SANT/MYB 1 -0.270 -0.045
52 247668_at AT5G60100 APRR3, pseudo-response regulator 3, PRR3, pseudo-response regulator 3 -0.260 -0.020
53 267191_at AT2G44110 ATMLO15, MILDEW RESISTANCE LOCUS O 15, MLO15, MILDEW RESISTANCE LOCUS O 15 -0.250 0.271
54 247094_at AT5G66280 GMD1, GDP-D-mannose 4,6-dehydratase 1 -0.249 0.162
55 251405_at AT3G60330 AHA7, H(+)-ATPase 7, HA7, H(+)-ATPase 7 -0.249 0.184
56 245967_at AT5G19800 [hydroxyproline-rich glycoprotein family protein] -0.249 0.140
57 254786_at AT4G12890 [Gamma interferon responsive lysosomal thiol (GILT) reductase family protein] -0.240 -0.009
58 249392_at AT5G40150 [Peroxidase superfamily protein] -0.229 0.001
59 254107_at AT4G25220 AtG3Pp2, glycerol-3-phosphate permease 2, G3Pp2, glycerol-3-phosphate permease 2, RHS15, root hair specific 15 -0.224 0.192
60 251298_at AT3G62040 [Haloacid dehalogenase-like hydrolase (HAD) superfamily protein] -0.221 0.008
61 246562_at AT5G15580 LNG1, LONGIFOLIA1, TRM2, TON1 Recruiting Motif 2 -0.218 0.249
62 256075_at AT1G18150 ATMPK8, MPK8 -0.213 -0.005
63 267158_at AT2G37640 ATEXP3, EXPANSIN 3, ATEXPA3, ARABIDOPSIS THALIANA EXPANSIN A3, ATHEXP ALPHA 1.9, EXP3 -0.203 0.037
64 262643_at AT1G62770 [Plant invertase/pectin methylesterase inhibitor superfamily protein] -0.193 -0.063
65 247043_at AT5G66880 SNRK2-3, SUCROSE NONFERMENTING 1 (SNF1)-RELATED PROTEIN KINASE 2-3, SNRK2.3, sucrose nonfermenting 1(SNF1)-related protein kinase 2.3, SRK2I -0.188 -0.093
66 266340_at AT2G01480 [O-fucosyltransferase family protein] -0.187 -0.099
67 248652_at AT5G49270 COBL9, COBRA-LIKE 9, DER9, DEFORMED ROOT HAIRS 9, MRH4, MUTANT ROOT HAIR 4, SHV2, SHAVEN 2 -0.187 0.160
68 266920_at AT2G45750 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] -0.184 0.059
69 259674_at AT1G77700 [Pathogenesis-related thaumatin superfamily protein] -0.183 0.013
70 247638_at AT5G60490 AtFLA12, FLA12, FASCICLIN-like arabinogalactan-protein 12 -0.180 0.083
71 245645_at AT1G24764 ATMAP70-2, microtubule-associated proteins 70-2, MAP70-2, microtubule-associated proteins 70-2 -0.179 -0.034
72 260034_at AT1G68810 [basic helix-loop-helix (bHLH) DNA-binding superfamily protein] -0.174 -0.072
73 253155_at AT4G35720 unknown -0.174 0.074
74 266109_at AT2G37890 [Mitochondrial substrate carrier family protein] -0.174 -0.000
75 252866_at AT4G39840 unknown -0.170 -0.119
76 257985_at AT3G20810 JMJ30, Jumonji C domain-containing protein 30, JMJD5, jumonji domain containing 5 -0.162 -0.024
77 252692_at AT3G43960 [Cysteine proteinases superfamily protein] -0.159 0.279
78 255607_at AT4G01130 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.159 0.034
79 258485_at AT3G02630 [Plant stearoyl-acyl-carrier-protein desaturase family protein] -0.154 -0.001
80 257896_at AT3G16920 ATCTL2, CTL2, chitinase-like protein 2 -0.153 0.084
81 265350_at AT2G22620 [Rhamnogalacturonate lyase family protein] -0.153 0.123
82 251653_at AT3G57130 BOP1, BLADE ON PETIOLE 1 -0.151 -0.030
83 262004_at AT1G64480 CBL8, calcineurin B-like protein 8 -0.150 0.026
84 262830_at AT1G14700 ATPAP3, PAP3, purple acid phosphatase 3 -0.147 0.013