4.0:Information of module
toc1-1-57hr
In comparison with bri1-116 help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0080134 regulation of response to stress BP 2.484e-13
GO:0031347 regulation of defense response BP 5.858e-13
GO:0072657 protein localization to membrane BP 9.529e-13
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0000041 transition metal ion transport BP 3.914e-12
GO:0010106 cellular response to iron ion starvation BP 8.605e-09
GO:0010167 response to nitrate BP 8.677e-09
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
toc1-1-57hr		 Log2 signal ratio
bri1-116
1 259975_at AT1G76470 [NAD(P)-binding Rossmann-fold superfamily protein] 0.507 0.172
2 260405_at AT1G69930 ATGSTU11, glutathione S-transferase TAU 11, GSTU11, glutathione S-transferase TAU 11 0.436 -0.171
3 256319_at AT1G35910 TPPD, trehalose-6-phosphate phosphatase D 0.418 0.025
4 257185_at AT3G13100 ABCC7, ATP-binding cassette C7, ATMRP7, multidrug resistance-associated protein 7, MRP7, MRP7, multidrug resistance-associated protein 7 0.414 -0.011
5 254243_at AT4G23210 CRK13, cysteine-rich RLK (RECEPTOR-like protein kinase) 13 0.397 0.007
6 244939_at ATCG00065 RPS12, RIBOSOMAL PROTEIN S12, RPS12A, ribosomal protein S12A 0.391 -0.147
7 249101_at AT5G43580 UPI, UNUSUAL SERINE PROTEASE INHIBITOR 0.359 -0.126
8 267436_at AT2G19190 FRK1, FLG22-induced receptor-like kinase 1 0.352 0.015
9 251336_at AT3G61190 BAP1, BON association protein 1 0.342 -0.279
10 251673_at AT3G57240 AtBG3, BG3, beta-1,3-glucanase 3 0.333 0.124
11 245035_at AT2G26400 ARD, ACIREDUCTONE DIOXYGENASE, ARD3, acireductone dioxygenase 3, ATARD3, acireductone dioxygenase 3 0.326 0.098
12 249197_at AT5G42380 CML37, calmodulin like 37 0.296 0.076
13 257323_at ATMG01200 ORF294 0.265 -0.280
14 249527_at AT5G38710 [Methylenetetrahydrofolate reductase family protein] 0.264 -0.176
15 254639_at AT4G18750 DOT4, DEFECTIVELY ORGANIZED TRIBUTARIES 4 0.263 0.046
16 254231_at AT4G23810 ATWRKY53, WRKY53 0.257 -0.018
17 244983_at ATCG00790 RPL16, ribosomal protein L16 0.252 -0.091
18 244982_at ATCG00780 RPL14, ribosomal protein L14 0.247 0.037
19 252908_at AT4G39670 [Glycolipid transfer protein (GLTP) family protein] 0.244 -0.231
20 246600_at AT5G14930 SAG101, senescence-associated gene 101 0.237 -0.049
21 250286_at AT5G13320 AtGH3.12, GDG1, GH3-LIKE DEFENSE GENE 1, GH3.12, GRETCHEN HAGEN 3.12, PBS3, AVRPPHB SUSCEPTIBLE 3, WIN3, HOPW1-1-INTERACTING 3 0.236 -0.142
22 256077_at AT1G18090 [5'-3' exonuclease family protein] 0.231 -0.003
23 261892_at AT1G80840 ATWRKY40, WRKY40, WRKY DNA-binding protein 40 0.224 0.203
24 261240_at AT1G32940 ATSBT3.5, SBT3.5 0.224 -0.200
25 265993_at AT2G24160 [pseudogene] 0.218 0.029
26 252417_at AT3G47480 [Calcium-binding EF-hand family protein] 0.213 0.035
27 262491_at AT1G21650 SECA2 0.207 -0.019
28 259925_at AT1G75040 PR-5, PR5, pathogenesis-related gene 5 0.203 0.144
29 245329_at AT4G14365 XBAT34, XB3 ortholog 4 in Arabidopsis thaliana 0.199 -0.203
30 261027_at AT1G01340 ACBK1, ATCNGC10, cyclic nucleotide gated channel 10, CNGC10, cyclic nucleotide gated channel 10 0.194 -0.129
31 245673_at AT1G56690 [Pentatricopeptide repeat (PPR) superfamily protein] 0.191 0.015
32 254215_at AT4G23700 ATCHX17, cation/H+ exchanger 17, CHX17, cation/H+ exchanger 17 0.191 -0.165
33 252373_at AT3G48090 ATEDS1, EDS1, enhanced disease susceptibility 1 0.188 -0.120
34 259928_at AT1G34380 [5'-3' exonuclease family protein] 0.181 0.097
35 254242_at AT4G23200 CRK12, cysteine-rich RLK (RECEPTOR-like protein kinase) 12 0.181 0.123
36 261973_at AT1G64610 [Transducin/WD40 repeat-like superfamily protein] 0.176 -0.149
37 261381_at AT1G05460 SDE3, SILENCING DEFECTIVE 0.174 0.091
38 255898_at AT1G17930 MAIN, MAINTENANCE OF MERISTEMS 0.167 0.088
39 259033_at AT3G09405 [Pectinacetylesterase family protein] 0.167 -0.163
40 260496_at AT2G41700 ABCA1, ATP-binding cassette A1, AtABCA1, Arabidopsis thaliana ATP-binding cassette A1 0.164 -0.008
41 248327_at AT5G52750 [Heavy metal transport/detoxification superfamily protein ] 0.161 -0.347
42 260023_at AT1G30040 ATGA2OX2, gibberellin 2-oxidase, GA2OX2, gibberellin 2-oxidase, GA2OX2, GIBBERELLIN 2-OXIDASE 2 0.158 -0.116
43 264434_at AT1G10340 [Ankyrin repeat family protein] 0.156 -0.026
44 256017_at AT1G19180 AtJAZ1, JAZ1, jasmonate-zim-domain protein 1, TIFY10A 0.154 -0.275
45 263291_at AT2G10920 unknown 0.152 0.110
46 253414_at AT4G33050 AtIQM1, EDA39, embryo sac development arrest 39, IQM1, IQ-motif protein 1 0.150 0.021
47 259392_at AT1G06380 [Ribosomal protein L1p/L10e family] 0.150 0.054
48 246099_at AT5G20230 ATBCB, blue-copper-binding protein, BCB, BLUE COPPER BINDING PROTEIN, BCB, blue-copper-binding protein, SAG14, SENESCENCE ASSOCIATED GENE 14 0.149 -0.222
49 264698_at AT1G70200 [RNA-binding (RRM/RBD/RNP motifs) family protein] 0.148 0.136
50 255879_at AT1G67000 [Protein kinase superfamily protein] 0.147 0.010
51 260869_at AT1G43800 FTM1, FLORAL TRANSITION AT THE MERISTEM1, SAD6, STEAROYL-ACYL CARRIER PROTEIN Δ9-DESATURASE6 -0.635 0.231
52 253608_at AT4G30290 ATXTH19, XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 19, XTH19, xyloglucan endotransglucosylase/hydrolase 19 -0.626 -0.538
53 248252_at AT5G53250 AGP22, arabinogalactan protein 22, ATAGP22, ARABINOGALACTAN PROTEIN 22 -0.582 -0.507
54 256736_at AT3G29410 [Terpenoid cyclases/Protein prenyltransferases superfamily protein] -0.545 0.053
55 258751_at AT3G05890 RCI2B, RARE-COLD-INDUCIBLE 2B -0.531 -0.177
56 266669_at AT2G29750 UGT71C1, UDP-glucosyl transferase 71C1 -0.524 -0.598
57 257481_at AT1G08430 ALMT1, aluminum-activated malate transporter 1, ATALMT1, ARABIDOPSIS THALIANA ALUMINUM-ACTIVATED MALATE TRANSPORTER 1 -0.500 -0.704
58 253613_at AT4G30320 [CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein] -0.497 0.051
59 253667_at AT4G30170 [Peroxidase family protein] -0.468 -0.503
60 255632_at AT4G00680 ADF8, actin depolymerizing factor 8 -0.460 0.065
61 261991_at AT1G33700 [Beta-glucosidase, GBA2 type family protein] -0.444 0.054
62 266838_at AT2G25980 [Mannose-binding lectin superfamily protein] -0.443 0.144
63 249545_at AT5G38030 [MATE efflux family protein] -0.419 -0.733
64 266336_at AT2G32270 ZIP3, zinc transporter 3 precursor -0.388 -0.049
65 266581_at AT2G46140 [Late embryogenesis abundant protein] -0.385 -0.232
66 251918_at AT3G54040 [PAR1 protein] -0.371 -0.126
67 253874_at AT4G27450 [Aluminium induced protein with YGL and LRDR motifs] -0.369 0.043
68 257026_at AT3G19200 unknown -0.362 0.198
69 262349_at AT2G48130 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.354 -0.141
70 255642_at AT4G00820 iqd17, IQ-domain 17 -0.332 -0.049
71 262317_at AT2G48140 EDA4, embryo sac development arrest 4 -0.323 0.020
72 254107_at AT4G25220 AtG3Pp2, glycerol-3-phosphate permease 2, G3Pp2, glycerol-3-phosphate permease 2, RHS15, root hair specific 15 -0.321 0.010
73 245736_at AT1G73330 ATDR4, drought-repressed 4, DR4, drought-repressed 4 -0.320 -0.170
74 245463_at AT4G17030 AT-EXPR, ATEXLB1, expansin-like B1, ATEXPR1, ATHEXP BETA 3.1, EXLB1, expansin-like B1, EXPR -0.300 -0.075
75 259478_at AT1G18980 [RmlC-like cupins superfamily protein] -0.295 -0.123
76 255105_at AT4G08620 SULTR1;1, sulphate transporter 1;1 -0.293 0.009
77 250208_at AT5G14000 anac084, NAC domain containing protein 84, NAC084, NAC domain containing protein 84 -0.284 -0.143
78 249061_at AT5G44550 [Uncharacterised protein family (UPF0497)] -0.283 -0.091
79 266591_at AT2G46225 ABIL1, ABI-1-like 1 -0.281 0.044
80 258367_at AT3G14370 WAG2 -0.279 -0.457
81 254896_at AT4G11880 AGL14, AGAMOUS-like 14, XAL2, XAANTAL2 -0.279 0.068
82 246390_at AT1G77330 ACO5, ACC oxidase 5 -0.278 -0.177
83 250145_at AT5G14690 unknown -0.269 0.039
84 261878_at AT1G50560 CYP705A25, cytochrome P450, family 705, subfamily A, polypeptide 25 -0.267 -0.603
85 246439_at AT5G17600 [RING/U-box superfamily protein] -0.267 0.222
86 253103_at AT4G36110 SAUR9, SMALL AUXIN UPREGULATED RNA 9 -0.263 -0.640
87 245126_at AT2G47460 ATMYB12, MYB DOMAIN PROTEIN 12, MYB12, myb domain protein 12, PFG1, PRODUCTION OF FLAVONOL GLYCOSIDES 1 -0.263 0.009
88 258487_at AT3G02550 LBD41, LOB domain-containing protein 41 -0.259 0.018
89 260991_at AT1G12160 [Flavin-binding monooxygenase family protein] -0.257 -0.270
90 245697_at AT5G04200 AtMC9, metacaspase 9, AtMCP2f, metacaspase 2f, MC9, metacaspase 9, MCP2f, metacaspase 2f -0.252 -0.288
91 267121_at AT2G23540 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.252 -0.204
92 253720_at AT4G29270 [HAD superfamily, subfamily IIIB acid phosphatase ] -0.249 -0.109
93 248801_at AT5G47370 HAT2 -0.242 -0.304
94 253024_at AT4G38080 [hydroxyproline-rich glycoprotein family protein] -0.241 -0.032
95 246310_at AT3G51895 AST12, SULTR3;1, sulfate transporter 3;1 -0.241 -0.004
96 259328_at AT3G16440 ATMLP-300B, myrosinase-binding protein-like protein-300B, MEE36, maternal effect embryo arrest 36, MLP-300B, myrosinase-binding protein-like protein-300B -0.241 -0.031
97 248400_at AT5G52020 [Integrase-type DNA-binding superfamily protein] -0.231 0.028
98 253285_at AT4G34250 KCS16, 3-ketoacyl-CoA synthase 16 -0.230 0.050
99 245328_at AT4G14465 AHL20, AT-hook motif nuclear-localized protein 20 -0.227 -0.160