4.0:Information of module
toc1-1-53hr
In comparison with Chemically help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0045087 innate immune response BP 6.457e-17
GO:0006955 immune response BP 7.191e-17
GO:0006952 defense response BP 5.320e-15
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0010015 root morphogenesis BP 1.061e-19
GO:0010054 trichoblast differentiation BP 1.199e-18
GO:0010053 root epidermal cell differentiation BP 3.149e-18
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
toc1-1-53hr		 Log2 signal ratio
Chemically
1 249174_at AT5G42900 COR27, cold regulated gene 27 0.855 0.018
2 256060_at AT1G07050 [CCT motif family protein] 0.831 -0.024
3 252265_at AT3G49620 DIN11, DARK INDUCIBLE 11 0.810 -0.111
4 259975_at AT1G76470 [NAD(P)-binding Rossmann-fold superfamily protein] 0.709 -0.016
5 256221_at AT1G56300 [Chaperone DnaJ-domain superfamily protein] 0.574 -0.012
6 267461_at AT2G33830 AtDRM2, DRM2, dormancy associated gene 2 0.548 -0.020
7 251884_at AT3G54150 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] 0.482 0.058
8 260890_at AT1G29090 [Cysteine proteinases superfamily protein] 0.473 -0.012
9 254243_at AT4G23210 CRK13, cysteine-rich RLK (RECEPTOR-like protein kinase) 13 0.451 0.165
10 253322_at AT4G33980 unknown 0.449 0.014
11 266799_at AT2G22860 ATPSK2, phytosulfokine 2 precursor, PSK2, phytosulfokine 2 precursor 0.441 -0.068
12 254001_at AT4G26260 MIOX4, myo-inositol oxygenase 4 0.427 -0.430
13 257185_at AT3G13100 ABCC7, ATP-binding cassette C7, ATMRP7, multidrug resistance-associated protein 7, MRP7, MRP7, multidrug resistance-associated protein 7 0.410 0.048
14 244974_at ATCG00700 PSBN, photosystem II reaction center protein N 0.365 0.054
15 260225_at AT1G74590 ATGSTU10, GLUTATHIONE S-TRANSFERASE TAU 10, GSTU10, glutathione S-transferase TAU 10 0.338 0.087
16 262452_at AT1G11210 unknown 0.335 0.033
17 254894_at AT4G11840 PLDGAMMA3, phospholipase D gamma 3 0.322 0.059
18 267036_at AT2G38465 unknown 0.318 0.026
19 248971_at AT5G45000 [Disease resistance protein (TIR-NBS-LRR class) family] 0.306 0.013
20 265478_at AT2G15890 MEE14, maternal effect embryo arrest 14 0.301 -0.008
21 257540_at AT3G21520 AtDMP1, Arabidopsis thaliana DUF679 domain membrane protein 1, DMP1, DUF679 domain membrane protein 1 0.294 0.009
22 248744_at AT5G48250 BBX8, B-box domain protein 8 0.279 0.019
23 254197_at AT4G24040 ATTRE1, TRE1, trehalase 1 0.278 -0.014
24 265597_at AT2G20142 [Toll-Interleukin-Resistance (TIR) domain family protein] 0.276 0.169
25 260741_at AT1G15040 GAT, glutamine amidotransferase, GAT1_2.1, glutamine amidotransferase 1_2.1 0.274 -0.123
26 258809_at AT3G04070 anac047, NAC domain containing protein 47, NAC047, NAC domain containing protein 47 0.272 0.026
27 259297_at AT3G05360 AtRLP30, receptor like protein 30, RLP30, receptor like protein 30 0.270 0.062
28 255923_at AT1G22180 [Sec14p-like phosphatidylinositol transfer family protein] 0.256 -0.003
29 260713_at AT1G17615 [Disease resistance protein (TIR-NBS class)] 0.242 -0.009
30 261934_at AT1G22400 ATUGT85A1, ARABIDOPSIS THALIANA UDP-GLUCOSYL TRANSFERASE 85A1, UGT85A1 0.241 -0.020
31 263539_at AT2G24850 TAT, TYROSINE AMINOTRANSFERASE, TAT3, tyrosine aminotransferase 3 0.239 0.036
32 249941_at AT5G22270 unknown 0.239 -0.026
33 252387_at AT3G47800 [Galactose mutarotase-like superfamily protein] 0.237 -0.054
34 255599_at AT4G01010 ATCNGC13, CYCLIC NUCLEOTIDE-GATED CHANNEL 13, CNGC13, cyclic nucleotide-gated channel 13 0.235 0.021
35 254248_at AT4G23270 CRK19, cysteine-rich RLK (RECEPTOR-like protein kinase) 19 0.231 0.000
36 261973_at AT1G64610 [Transducin/WD40 repeat-like superfamily protein] 0.225 0.028
37 261039_at AT1G17455 ELF4-L4, ELF4-like 4 0.223 -0.006
38 244929_at ATMG00580 NAD4, NADH dehydrogenase subunit 4 0.217 -0.047
39 255607_at AT4G01130 [GDSL-like Lipase/Acylhydrolase superfamily protein] 0.207 -0.042
40 250412_at AT5G11150 ATVAMP713, vesicle-associated membrane protein 713, VAMP713, VAMP713, vesicle-associated membrane protein 713 0.194 -0.012
41 250380_at AT5G11600 unknown 0.191 -0.011
42 247204_at AT5G64990 AtRABH1a, RAB GTPase homolog H1A, RABH1a, RAB GTPase homolog H1A 0.188 -0.030
43 262296_at AT1G27630 CYCT1;3, cyclin T 1;3 0.185 0.010
44 252827_at AT4G39950 CYP79B2, cytochrome P450, family 79, subfamily B, polypeptide 2 0.184 0.102
45 254605_at AT4G18950 [Integrin-linked protein kinase family] 0.184 -0.025
46 254252_at AT4G23310 CRK23, cysteine-rich RLK (RECEPTOR-like protein kinase) 23 0.183 -0.014
47 247302_at AT5G63880 VPS20.1 0.179 0.025
48 264645_at AT1G08940 [Phosphoglycerate mutase family protein] 0.179 0.009
49 248307_at AT5G52850 [Pentatricopeptide repeat (PPR) superfamily protein] 0.177 0.020
50 251232_at AT3G62780 [Calcium-dependent lipid-binding (CaLB domain) family protein] 0.176 -0.062
51 266235_at AT2G02360 AtPP2-B10, phloem protein 2-B10, PP2-B10, phloem protein 2-B10 0.174 -0.001
52 252487_at AT3G46660 UGT76E12, UDP-glucosyl transferase 76E12 0.173 0.024
53 253414_at AT4G33050 AtIQM1, EDA39, embryo sac development arrest 39, IQM1, IQ-motif protein 1 0.173 0.050
54 252303_at AT3G49210 [O-acyltransferase (WSD1-like) family protein] 0.170 -0.032
55 252698_at AT3G43670 [Copper amine oxidase family protein] 0.169 -0.012
56 262324_at AT1G64170 ATCHX16, cation/H+ exchanger 16, CHX16, cation/H+ exchanger 16 0.169 0.097
57 253998_at AT4G26010 [Peroxidase superfamily protein] -1.117 -0.465
58 255516_at AT4G02270 RHS13, root hair specific 13 -0.961 -0.428
59 254044_at AT4G25820 ATXTH14, XTH14, xyloglucan endotransglucosylase/hydrolase 14, XTR9, xyloglucan endotransglycosylase 9 -0.922 -0.421
60 250778_at AT5G05500 MOP10 -0.905 -0.472
61 258751_at AT3G05890 RCI2B, RARE-COLD-INDUCIBLE 2B -0.900 -0.117
62 251226_at AT3G62680 ATPRP3, ARABIDOPSIS THALIANA PROLINE-RICH PROTEIN 3, PRP3, proline-rich protein 3 -0.868 -0.513
63 246991_at AT5G67400 RHS19, root hair specific 19 -0.811 -0.418
64 261157_at AT1G34510 [Peroxidase superfamily protein] -0.761 -0.817
65 253667_at AT4G30170 [Peroxidase family protein] -0.692 -0.253
66 250059_at AT5G17820 [Peroxidase superfamily protein] -0.684 -0.244
67 252238_at AT3G49960 [Peroxidase superfamily protein] -0.650 -0.523
68 247871_at AT5G57530 AtXTH12, XTH12, xyloglucan endotransglucosylase/hydrolase 12 -0.642 -0.622
69 265102_at AT1G30870 [Peroxidase superfamily protein] -0.621 -0.356
70 246825_at AT5G26260 [TRAF-like family protein] -0.588 -0.074
71 248252_at AT5G53250 AGP22, arabinogalactan protein 22, ATAGP22, ARABINOGALACTAN PROTEIN 22 -0.502 -0.362
72 253608_at AT4G30290 ATXTH19, XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 19, XTH19, xyloglucan endotransglucosylase/hydrolase 19 -0.501 0.211
73 266941_at AT2G18980 [Peroxidase superfamily protein] -0.444 0.317
74 256352_at AT1G54970 ATPRP1, proline-rich protein 1, PRP1, proline-rich protein 1, RHS7, ROOT HAIR SPECIFIC 7 -0.425 -0.626
75 249375_at AT5G40730 AGP24, arabinogalactan protein 24, ATAGP24, ARABIDOPSIS THALIANA ARABINOGALACTAN PROTEIN 24 -0.415 -0.164
76 262838_at AT1G14960 [Polyketide cyclase/dehydrase and lipid transport superfamily protein] -0.404 -0.356
77 258765_at AT3G10710 RHS12, root hair specific 12 -0.395 -0.534
78 251843_x_at AT3G54590 ATHRGP1, hydroxyproline-rich glycoprotein, HRGP1, hydroxyproline-rich glycoprotein -0.390 -0.339
79 266838_at AT2G25980 [Mannose-binding lectin superfamily protein] -0.388 -0.088
80 264029_at AT2G03720 MRH6, morphogenesis of root hair 6 -0.377 -0.522
81 247094_at AT5G66280 GMD1, GDP-D-mannose 4,6-dehydratase 1 -0.376 -0.190
82 245172_at AT2G47540 [Pollen Ole e 1 allergen and extensin family protein] -0.374 -0.284
83 250683_x_at AT5G06640 EXT10, extensin 10 -0.361 -0.284
84 251720_at AT3G56160 [Sodium Bile acid symporter family] -0.357 -0.059
85 251405_at AT3G60330 AHA7, H(+)-ATPase 7, HA7, H(+)-ATPase 7 -0.356 -0.250
86 246125_at AT5G19875 unknown -0.352 0.016
87 261999_at AT1G33800 AtGXMT1, GXM1, glucuronoxylan methyltransferase 1, GXMT1, glucuronoxylan methyltransferase 1 -0.348 -0.062
88 260475_at AT1G11080 scpl31, serine carboxypeptidase-like 31 -0.346 0.062
89 261099_at AT1G62980 ATEXP18, ATEXPA18, expansin A18, ATHEXP ALPHA 1.25, EXP18, EXPANSIN 18, EXPA18, expansin A18 -0.343 -0.402
90 266591_at AT2G46225 ABIL1, ABI-1-like 1 -0.325 0.033
91 254226_at AT4G23690 AtDIR6, Arabidopsis thaliana dirigent protein 6, DIR6, dirigent protein 6 -0.324 0.096
92 255632_at AT4G00680 ADF8, actin depolymerizing factor 8 -0.313 -0.650
93 257924_at AT3G23190 [HR-like lesion-inducing protein-related] -0.296 -0.240
94 247477_at AT5G62340 [Plant invertase/pectin methylesterase inhibitor superfamily protein] -0.293 -0.322
95 253353_at AT4G33730 [CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein] -0.291 -0.439
96 260803_at AT1G78340 ATGSTU22, glutathione S-transferase TAU 22, GSTU22, glutathione S-transferase TAU 22 -0.285 -0.056
97 261930_at AT1G22440 [Zinc-binding alcohol dehydrogenase family protein] -0.280 -0.049
98 254746_at AT4G12980 [Auxin-responsive family protein] -0.280 -0.075
99 249545_at AT5G38030 [MATE efflux family protein] -0.279 -0.138
100 245736_at AT1G73330 ATDR4, drought-repressed 4, DR4, drought-repressed 4 -0.277 -0.271
101 261691_at AT1G50060 [CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein] -0.276 -0.092
102 245139_at AT2G45430 AHL22, AT-hook motif nuclear-localized protein 22 -0.273 -0.054
103 253515_at AT4G31320 SAUR37, SMALL AUXIN UPREGULATED RNA 37 -0.270 -0.142
104 252011_at AT3G52720 ACA1, alpha carbonic anhydrase 1, ATACA1, A. THALIANA ALPHA CARBONIC ANHYDRASE 1, CAH1, CARBONIC ANHYDRASE 1 -0.269 0.152
105 261428_at AT1G18870 ATICS2, ARABIDOPSIS ISOCHORISMATE SYNTHASE 2, ICS2, isochorismate synthase 2 -0.264 -0.047
106 245463_at AT4G17030 AT-EXPR, ATEXLB1, expansin-like B1, ATEXPR1, ATHEXP BETA 3.1, EXLB1, expansin-like B1, EXPR -0.264 0.204
107 255105_at AT4G08620 SULTR1;1, sulphate transporter 1;1 -0.260 -0.149
108 248178_at AT5G54370 [Late embryogenesis abundant (LEA) protein-related] -0.259 -0.291
109 259525_at AT1G12560 ATEXP7, ATEXPA7, expansin A7, ATHEXP ALPHA 1.26, EXP7, EXPA7, expansin A7 -0.259 -0.420
110 251928_at AT3G53980 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.259 -0.057
111 246540_at AT5G15600 SP1L4, SPIRAL1-like4 -0.252 -0.206