4.0:Information of module
pip3 At2g19270 TDNA 1
In comparison with whole roots 140 mM NaCl 4 hour help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0006457 protein folding BP 9.355e-05
GO:0042542 response to hydrogen peroxide BP 1.291e-04
GO:0009644 response to high light intensity BP 1.521e-04
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0035304 regulation of protein dephosphorylation BP 2.015e-08
GO:0035303 regulation of dephosphorylation BP 2.455e-08
GO:0016311 dephosphorylation BP 6.745e-08
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
pip3 At2g19270 TDNA 1		 Log2 signal ratio
whole roots 140 mM NaCl 4 hour
1 267330_at AT2G19270 unknown 0.554 0.107
2 258130_at AT3G24510 [Defensin-like (DEFL) family protein] 0.328 -0.246
3 266766_at AT2G46880 ATPAP14, PAP14, purple acid phosphatase 14 0.283 0.022
4 262382_at AT1G72920 [Toll-Interleukin-Resistance (TIR) domain family protein] 0.210 0.117
5 257645_at AT3G25790 [myb-like transcription factor family protein] 0.195 0.047
6 246888_at AT5G26270 unknown 0.192 -0.147
7 252483_at AT3G46600 [GRAS family transcription factor] 0.166 -0.128
8 265147_at AT1G51380 [DEA(D/H)-box RNA helicase family protein] 0.162 -0.081
9 257487_at AT1G71850 [Ubiquitin carboxyl-terminal hydrolase family protein] 0.154 -0.025
10 250418_at AT5G11240 [transducin family protein / WD-40 repeat family protein] 0.141 -0.104
11 264342_at AT1G12080 [Vacuolar calcium-binding protein-related] 0.136 -0.404
12 260717_at AT1G48120 [hydrolases] 0.135 0.213
13 256100_at AT1G13750 [Purple acid phosphatases superfamily protein] 0.133 -0.056
14 260266_at AT1G68520 BBX14, B-box domain protein 14 0.131 0.086
15 245257_at AT4G14640 AtCML8, calmodulin-like 8, CAM8, calmodulin 8, CML8 0.130 -0.097
16 250087_at AT5G17270 [Protein prenylyltransferase superfamily protein] 0.127 -0.028
17 257765_at AT3G23020 [Tetratricopeptide repeat (TPR)-like superfamily protein] 0.121 -0.003
18 256332_at AT1G76890 AT-GT2, GT2 0.120 -0.208
19 254818_at AT4G12470 AZI1, azelaic acid induced 1 0.114 -0.105
20 259225_at AT3G07590 [Small nuclear ribonucleoprotein family protein] 0.114 -0.009
21 249052_at AT5G44420 LCR77, LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 77, PDF1.2, plant defensin 1.2, PDF1.2A, PLANT DEFENSIN 1.2A 0.110 0.026
22 262953_at AT1G75670 [DNA-directed RNA polymerases] 0.110 -0.080
23 252692_at AT3G43960 [Cysteine proteinases superfamily protein] 0.108 -0.098
24 255887_at AT1G20370 [Pseudouridine synthase family protein] 0.108 -0.043
25 254111_at AT4G24890 ATPAP24, ARABIDOPSIS THALIANA PURPLE ACID PHOSPHATASE 24, PAP24, purple acid phosphatase 24 0.108 0.130
26 245892_at AT5G09370 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] 0.107 -0.007
27 248810_at AT5G47280 ADR1-L3, ADR1-like 3 0.105 0.077
28 256535_at AT1G33280 ANAC015, NAC domain containing protein 15, BRN1, BEARSKIN 1, NAC015, NAC domain containing protein 15 0.104 0.085
29 246765_at AT5G27330 [Prefoldin chaperone subunit family protein] 0.101 -0.009
30 263690_at AT1G26960 AtHB23, homeobox protein 23, HB23, homeobox protein 23 0.100 -0.041
31 265730_at AT2G32220 [Ribosomal L27e protein family] 0.100 -0.029
32 262998_at AT1G54280 [ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein] 0.100 0.035
33 253432_at AT4G32450 MEF8S, MEF8 similar 0.099 0.067
34 249780_at AT5G24240 [Phosphatidylinositol 3- and 4-kinase ] -0.766 0.003
35 260890_at AT1G29090 [Cysteine proteinases superfamily protein] -0.400 0.067
36 253660_at AT4G30140 CDEF1, CUTICLE DESTRUCTING FACTOR 1 -0.341 0.029
37 248910_at AT5G45820 CIPK20, CBL-interacting protein kinase 20, PKS18, PROTEIN KINASE 18, SnRK3.6, SNF1-RELATED PROTEIN KINASE 3.6 -0.323 0.015
38 246250_at AT4G36880 CP1, cysteine proteinase1, RDL1, RD21A-LIKE PROTEASE1 -0.314 0.288
39 262309_at AT1G70820 [phosphoglucomutase, putative / glucose phosphomutase, putative] -0.249 -0.010
40 262719_at AT1G43590 unknown -0.228 0.031
41 252004_at AT3G52780 ATPAP20, PAP20 -0.206 0.526
42 261254_at AT1G05805 AKS2, ABA-responsive kinase substrate 2 -0.176 -0.118
43 266695_at AT2G19810 AtOZF1, AtTZF2, OZF1, Oxidation-related Zinc Finger 1, TZF2, tandem zinc finger 2 -0.170 0.007
44 261942_at AT1G22590 AGL87, AGAMOUS-like 87 -0.167 -0.024
45 266711_at AT2G46740 AtGulLO5, GulLO5, L -gulono-1,4-lactone ( L -GulL) oxidase 5 -0.165 -0.056
46 245668_at AT1G28330 AtDRM1, DRM1, DORMANCY-ASSOCIATED PROTEIN 1, DYL1, dormancy-associated protein-like 1 -0.160 0.073
47 245088_at AT2G39850 [Subtilisin-like serine endopeptidase family protein] -0.157 -0.030
48 260237_at AT1G74430 ATMYB95, ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 95, ATMYBCP66, ARABIDOPSIS THALIANA MYB DOMAIN CONTAINING PROTEIN 66, MYB95, myb domain protein 95 -0.151 -0.017
49 248545_at AT5G50260 CEP1, cysteine endopeptidase 1 -0.151 0.398
50 247760_at AT5G59130 [Subtilase family protein] -0.147 -0.046
51 264843_at AT1G03400 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] -0.145 -0.005
52 267078_at AT2G40960 [Single-stranded nucleic acid binding R3H protein] -0.143 -0.033
53 248163_at AT5G54510 DFL1, DWARF IN LIGHT 1, GH3.6, Gretchen Hagen3.6 -0.140 0.019
54 245734_at AT1G73480 [alpha/beta-Hydrolases superfamily protein] -0.136 0.486
55 264957_at AT1G77000 ATSKP2;2, ARABIDOPSIS HOMOLOG OF HOMOLOG OF HUMAN SKP2 2, SKP2B -0.132 0.298
56 257925_at AT3G23170 unknown -0.124 0.284
57 249059_at AT5G44530 [Subtilase family protein] -0.121 0.048
58 260357_at AT1G69260 AFP1, ABI five binding protein -0.118 0.515
59 248118_at AT5G55050 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.115 0.026
60 264900_at AT1G23080 ATPIN7, ARABIDOPSIS PIN-FORMED 7, PIN7, PIN-FORMED 7 -0.110 -0.121
61 248104_at AT5G55250 AtIAMT1, IAMT1, IAA carboxylmethyltransferase 1 -0.110 -0.102
62 261026_at AT1G01240 unknown -0.110 0.152
63 250971_at AT5G02810 APRR7, PRR7, pseudo-response regulator 7 -0.107 -0.033
64 248008_at AT5G56270 ATWRKY2, ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 2, WRKY2, WRKY DNA-binding protein 2 -0.106 0.200
65 250907_at AT5G03670 TRM28, TON1 Recruiting Motif 28 -0.106 -0.063