4.0:Information of module
gpa1 -ABA GC
In comparison with cat2-2; 8h switch to ambient CO2 concentrations; help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0009657 plastid organization BP 2.499e-07
GO:0034660 ncRNA metabolic process BP 3.469e-05
GO:0009658 chloroplast organization BP 1.495e-04
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0015711 organic anion transport BP 2.376e-12
GO:0006952 defense response BP 2.072e-11
GO:0015849 organic acid transport BP 3.848e-11
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
gpa1 -ABA GC		 Log2 signal ratio
cat2-2; 8h switch to ambient CO2 concentrations;
1 245165_at AT2G33180 unknown 0.206 -0.082
2 249127_at AT5G43500 ARP9, actin-related protein 9, ATARP9, actin-related protein 9 0.201 0.033
3 246116_at AT5G20310 [Adenine nucleotide alpha hydrolases-like superfamily protein] 0.188 -0.035
4 245458_at AT4G16970 [Protein kinase superfamily protein] 0.163 -0.004
5 248683_at AT5G48490 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] 0.161 0.007
6 249468_at AT5G39650 unknown 0.158 -0.041
7 260634_at AT1G62410 [MIF4G domain-containing protein] 0.155 -0.070
8 259968_at AT1G76530 [Auxin efflux carrier family protein] 0.152 0.086
9 245937_at AT5G19750 [Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein] 0.148 -0.048
10 262598_at AT1G15260 unknown 0.142 -0.011
11 266957_at AT2G34640 HMR, HEMERA, PTAC12, plastid transcriptionally active 12, TAC12 0.142 0.006
12 248052_at AT5G55800 [Cysteine/Histidine-rich C1 domain family protein] 0.138 -0.037
13 256141_at AT1G48640 [Transmembrane amino acid transporter family protein] 0.137 -0.052
14 248538_at AT5G50110 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] 0.136 -0.093
15 266382_at AT2G14595 [Mutator-like transposase family, has a 4.1e-55 P-value blast match to Q9SHN7 /450-633 Pfam PF03108 MuDR family transposase (MuDr-element domain)] 0.135 -0.034
16 263846_at AT2G36990 ATSIG6, SIGMA FACTOR 6, SIG6, SIGMA FACTOR 6, SIGF, RNApolymerase sigma-subunit F, SOLDAT8 0.135 0.010
17 259003_at AT3G02010 [Pentatricopeptide repeat (PPR) superfamily protein] 0.133 -0.043
18 249586_at AT5G37840 unknown 0.131 0.007
19 267529_at AT2G45490 AtAUR3, ataurora3, AUR3, ataurora3 0.130 -0.086
20 247881_at AT5G57700 [BNR/Asp-box repeat family protein] 0.127 -0.040
21 265627_at AT2G27285 [Coiled-coil domain-containing protein 55 (DUF2040)] 0.124 0.080
22 249620_at AT5G37520 unknown 0.124 -0.002
23 249113_at AT5G43790 [Pentatricopeptide repeat (PPR) superfamily protein] 0.123 -0.108
24 264610_at AT1G04645 [Plant self-incompatibility protein S1 family] 0.123 -0.015
25 251527_at AT3G58650 TRM7, TON1 Recruiting Motif 7 0.122 0.005
26 250389_at AT5G11320 AtYUC4, YUC4, YUCCA4 0.120 -0.043
27 267375_at AT2G26300 ATGPA1, ARABIDOPSIS THALIANA G PROTEIN ALPHA SUBUNIT 1, GP ALPHA 1, G protein alpha subunit 1, GPA1, G PROTEIN ALPHA SUBUNIT 1 -0.938 0.032
28 260296_at AT1G63750 [Disease resistance protein (TIR-NBS-LRR class) family] -0.557 0.104
29 248358_at AT5G52400 CYP715A1, cytochrome P450, family 715, subfamily A, polypeptide 1 -0.496 -0.048
30 263228_at AT1G30700 [FAD-binding Berberine family protein] -0.488 0.180
31 247440_at AT5G62680 AtNPF2.11, GTR2, GLUCOSINOLATE TRANSPORTER-2, NPF2.11, NRT1/ PTR family 2.11 -0.476 0.009
32 250323_at AT5G12880 [proline-rich family protein] -0.468 0.038
33 245567_at AT4G14630 GLP9, germin-like protein 9 -0.447 0.095
34 262930_at AT1G65690 [Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family] -0.425 0.181
35 264716_at AT1G70170 MMP, matrix metalloproteinase -0.417 0.041
36 254652_at AT4G18170 ATWRKY28, WRKY28, WRKY DNA-binding protein 28 -0.407 0.124
37 261021_at AT1G26380 [FAD-binding Berberine family protein] -0.403 0.270
38 258897_at AT3G05730 [LOCATED IN: endomembrane system] -0.402 -0.046
39 263948_at AT2G35980 ATNHL10, ARABIDOPSIS NDR1/HIN1-LIKE 10, NHL10, NDR1/HIN1-LIKE, YLS9, YELLOW-LEAF-SPECIFIC GENE 9 -0.396 0.165
40 251884_at AT3G54150 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] -0.395 0.112
41 248934_at AT5G46080 [Protein kinase superfamily protein] -0.391 0.074
42 248703_at AT5G48430 [Eukaryotic aspartyl protease family protein] -0.382 0.159
43 245151_at AT2G47550 [Plant invertase/pectin methylesterase inhibitor superfamily] -0.376 -0.068
44 246406_at AT1G57650 [ATP binding] -0.369 0.070
45 255339_at AT4G04480 unknown -0.355 -0.012
46 249527_at AT5G38710 [Methylenetetrahydrofolate reductase family protein] -0.347 0.137
47 265030_at AT1G61610 [S-locus lectin protein kinase family protein] -0.339 0.145
48 245363_at AT4G15120 [VQ motif-containing protein] -0.327 0.083
49 251950_at AT3G53600 [C2H2-type zinc finger family protein] -0.319 0.007
50 265034_at AT1G61660 [basic helix-loop-helix (bHLH) DNA-binding superfamily protein] -0.314 0.024
51 252652_at AT3G44720 ADT4, arogenate dehydratase 4 -0.307 -0.032