4.0:Information of module
rsl4
In comparison with Leafminer damaged seedlings help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:1902578 single-organism localization BP 3.039e-08
GO:0044765 single-organism transport BP 3.934e-08
GO:0006810 transport BP 1.823e-07
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0010054 trichoblast differentiation BP 1.525e-12
GO:0010053 root epidermal cell differentiation BP 2.688e-12
GO:0090627 plant epidermal cell differentiation BP 5.595e-12
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
rsl4		 Log2 signal ratio
Leafminer damaged seedlings
1 245245_at AT1G44318 hemb2 1.003 -0.052
2 253301_at AT4G33720 [CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein] 0.620 0.049
3 262855_at AT1G20860 PHT1;8, phosphate transporter 1;8 0.591 -0.025
4 247718_at AT5G59310 LTP4, lipid transfer protein 4 0.542 0.287
5 252663_at AT3G44070 [Glycosyl hydrolase family 35 protein] 0.518 0.002
6 252462_at AT3G47250 unknown 0.513 -0.005
7 262321_at AT1G27570 [phosphatidylinositol 3- and 4-kinase family protein] 0.490 0.043
8 259788_at AT1G29670 [GDSL-like Lipase/Acylhydrolase superfamily protein] 0.433 0.075
9 255754_at AT1G43040 SAUR58, SMALL AUXIN UPREGULATED RNA 58 0.352 0.021
10 261662_at AT1G18350 ATMKK7, MAP kinase kinase 7, BUD1, BUSHY AND DWARF 1, MKK7, MAP kinase kinase 7, MKK7, MAP KINASE KINASE7 0.279 0.038
11 263010_at AT1G23330 [alpha/beta-Hydrolases superfamily protein] 0.278 0.157
12 264527_at AT1G30760 [FAD-binding Berberine family protein] 0.276 0.220
13 251069_at AT5G01930 AtMAN6, MAN6, endo-beta-mannase 6 0.260 -0.211
14 267101_at AT2G41480 AtPRX25, PRX25, peroxidase 25 0.245 0.157
15 248790_at AT5G47450 ATTIP2;3, ARABIDOPSIS THALIANA TONOPLAST INTRINSIC PROTEIN 2;3, DELTA-TIP3, DELTA-TONOPLAST INTRINSIC PROTEIN 3, TIP2;3, tonoplast intrinsic protein 2;3 0.242 0.050
16 264901_at AT1G23090 AST91, sulfate transporter 91, SULTR3;3 0.241 0.044
17 249800_at AT5G23660 AtSWEET12, MTN3, homolog of Medicago truncatula MTN3, SWEET12 0.240 0.223
18 248382_at AT5G51890 [Peroxidase superfamily protein] 0.236 -0.115
19 246250_at AT4G36880 CP1, cysteine proteinase1, RDL1, RD21A-LIKE PROTEASE1 0.221 0.024
20 261760_at AT1G15600 unknown 0.221 -0.008
21 251858_at AT3G54820 PIP2;5, plasma membrane intrinsic protein 2;5, PIP2D, PLASMA MEMBRANE INTRINSIC PROTEIN 2D 0.217 0.103
22 260684_at AT1G17590 NF-YA8, nuclear factor Y, subunit A8 0.212 0.037
23 263295_at AT2G14210 AGL44, AGAMOUS-like 44, ANR1, ARABIDOPSIS NITRATE REGULATED 1 0.210 -0.022
24 245671_at AT1G28230 ATPUP1, PUP1, purine permease 1 0.204 0.321
25 266967_at AT2G39530 [Uncharacterised protein family (UPF0497)] 0.203 0.562
26 264466_at AT1G10380 [Putative membrane lipoprotein] 0.203 -0.327
27 260333_at AT1G70500 [Pectin lyase-like superfamily protein] 0.203 0.097
28 249459_at AT5G39580 [Peroxidase superfamily protein] 0.199 0.385
29 262128_at AT1G52690 LEA7, LATE EMBRYOGENESIS ABUNDANT 7 0.199 0.456
30 248245_at AT5G53190 AtSWEET3, SWEET3 0.198 -0.023
31 246908_at AT5G25610 ATRD22, RD22, RESPONSIVE TO DESSICATION 22 0.195 0.014
32 252327_at AT3G48740 AtSWEET11, SWEET11 0.194 -0.126
33 248855_at AT5G46590 anac096, NAC domain containing protein 96, NAC096, NAC domain containing protein 96 0.190 0.591
34 250157_at AT5G15180 [Peroxidase superfamily protein] 0.190 0.034
35 258414_at AT3G17380 [TRAF-like family protein] 0.189 -0.144
36 262120_at AT1G02950 ATGSTF4, glutathione S-transferase F4, GST31, GLUTATHIONE S-TRANSFERASE 31, GSTF4, glutathione S-transferase F4 0.183 -0.106
37 262737_at AT1G28560 SRD2, SHOOT REDIFFERENTIATION DEFECTIVE 2 0.181 -0.476
38 265083_at AT1G03820 unknown 0.178 0.405
39 246888_at AT5G26270 unknown 0.176 0.273
40 246389_at AT1G77380 AAP3, amino acid permease 3, ATAAP3 0.174 0.433
41 245670_at AT1G28210 ATJ1 0.173 0.068
42 255160_at AT4G07820 [CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein] 0.168 0.098
43 260560_at AT2G43590 [Chitinase family protein] 0.167 0.393
44 247452_at AT5G62430 CDF1, cycling DOF factor 1 0.167 0.047
45 264962_at AT1G77110 PIN6, PIN-FORMED 6 0.166 -0.124
46 256299_at AT1G69530 AT-EXP1, ATEXP1, ATEXPA1, expansin A1, ATHEXP ALPHA 1.2, EXP1, EXPANSIN 1, EXPA1, expansin A1 0.165 -0.020
47 246001_at AT5G20790 unknown 0.165 -0.646
48 246937_at AT5G25370 PLDALPHA3, phospholipase D alpha 3 0.163 -0.047
49 266098_at AT2G37870 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] 0.163 0.201
50 248298_at AT5G53110 [RING/U-box superfamily protein] 0.162 0.404
51 250702_at AT5G06730 [Peroxidase superfamily protein] 0.162 0.111
52 261448_at AT1G21140 [Vacuolar iron transporter (VIT) family protein] 0.162 -0.056
53 259774_at AT1G29520 [AWPM-19-like family protein] 0.160 -0.049
54 253191_at AT4G35350 XCP1, xylem cysteine peptidase 1 0.159 -0.175
55 252511_at AT3G46280 [protein kinase-related] 0.158 0.678
56 264252_at AT1G09180 ATSAR1, SECRETION-ASSOCIATED RAS 1, ATSARA1A, secretion-associated RAS super family 1, SARA1A, secretion-associated RAS super family 1 0.156 0.380
57 257049_at AT3G15250 unknown 0.156 -0.008
58 256968_at AT3G21070 ATNADK-1, NAD KINASE 1, NADK1, NAD kinase 1 0.154 0.345
59 257671_at AT3G20450 [B-cell receptor-associated protein 31-like ] 0.152 0.013
60 254407_at AT4G21370 pseudogene 0.146 0.018
61 255376_x_at AT4G03790 [gypsy-like retrotransposon family (Athila), has a 2.2e-286 P-value blast match to GB:CAA57397 Athila ORF 1 (Arabidopsis thaliana)] 0.145 -0.038
62 266943_at AT2G18820 [non-LTR retrotransposon family (LINE), has a 2.7e-38 P-value blast match to GB:NP_038607 L1 repeat, Tf subfamily, member 9 (LINE-element) (Mus musculus)] 0.145 0.033
63 260852_at AT1G21900 p24delta5, p24 subfamily delta 5 0.145 0.150
64 255372_at AT4G04120 [copia-like retrotransposon family, has a 3.8e-19 P-value blast match to GB:BAA78423 polyprotein (Ty1_Copia-element) (Arabidopsis thaliana)GB:BAA78423 polyprotein (Ty1_Copia-element) (Arabidopsis thaliana)GB:BAA78423 polyprotein (Ty1_Copia-element) (Arabidopsis thaliana)gi|4996361|dbj|BAA78423.1| polyprotein (Arabidopsis thaliana) (Ty1_Copia-element)] 0.144 0.041
65 253088_at AT4G36220 CYP84A1, CYTOCHROME P450 84A1, FAH1, ferulic acid 5-hydroxylase 1 0.141 0.092
66 258182_at AT3G21500 DXL1, DXS-like 1, DXPS1, 1-deoxy-D-xylulose 5-phosphate synthase 1, DXS2, 1-deoxy-D-xylulose 5-phosphate (DXP) synthase 2 0.141 0.447
67 245463_at AT4G17030 AT-EXPR, ATEXLB1, expansin-like B1, ATEXPR1, ATHEXP BETA 3.1, EXLB1, expansin-like B1, EXPR 0.141 -0.471
68 261647_at AT1G27740 RSL4, root hair defective 6-like 4 -0.689 -0.059
69 247871_at AT5G57530 AtXTH12, XTH12, xyloglucan endotransglucosylase/hydrolase 12 -0.603 0.031
70 254772_at AT4G13390 EXT12, extensin 12 -0.590 0.004
71 253259_at AT4G34410 RRTF1, redox responsive transcription factor 1 -0.534 1.097
72 265170_at AT1G23730 ATBCA3, BETA CARBONIC ANHYDRASE 3, BCA3, beta carbonic anhydrase 3 -0.511 0.037
73 246652_at AT5G35190 EXT13, extensin 13 -0.506 -0.058
74 260926_at AT1G21360 GLTP2, glycolipid transfer protein 2 -0.497 0.028
75 248684_at AT5G48485 DIR1, DEFECTIVE IN INDUCED RESISTANCE 1 -0.436 -0.173
76 262517_at AT1G17180 ATGSTU25, glutathione S-transferase TAU 25, GSTU25, glutathione S-transferase TAU 25 -0.397 0.186
77 256208_at AT1G50930 unknown -0.381 0.015
78 256493_at AT1G31600 AtTRM9, Arabidopsis thaliana tRNA methyltransferase 9, TRM9, tRNA methyltransferase 9 -0.380 0.026
79 265155_at AT1G30990 [Polyketide cyclase/dehydrase and lipid transport superfamily protein] -0.379 -0.110
80 246260_at AT1G31820 PUT1, POLYAMINE UPTAKE TRANSPORTER 1 -0.342 -0.005
81 266765_at AT2G46860 AtPPa3, pyrophosphorylase 3, PPa3, pyrophosphorylase 3 -0.339 -0.098
82 259624_at AT1G43020 unknown -0.336 -0.007
83 258606_at AT3G02840 [ARM repeat superfamily protein] -0.325 0.864
84 262705_at AT1G16260 [Wall-associated kinase family protein] -0.320 -0.145
85 252341_at AT3G48940 [Remorin family protein] -0.316 -0.069
86 250632_at AT5G07450 CYCP4;3, cyclin p4;3 -0.311 0.038
87 259400_at AT1G17750 AtPEPR2, PEP1 RECEPTOR 2, PEPR2, PEP1 receptor 2 -0.311 0.593
88 262211_at AT1G74930 ORA47 -0.307 0.467
89 258352_at AT3G17600 IAA31, indole-3-acetic acid inducible 31 -0.303 0.029
90 253643_at AT4G29780 unknown -0.301 0.791
91 258832_at AT3G07070 [Protein kinase superfamily protein] -0.300 -0.042
92 254097_at AT4G25160 [U-box domain-containing protein kinase family protein] -0.282 -0.073
93 254025_at AT4G25790 [CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein] -0.278 -0.012
94 247531_at AT5G61550 [U-box domain-containing protein kinase family protein] -0.274 -0.044
95 262028_at AT1G35560 AtTCP23, TCP23, TCP domain protein 23 -0.273 -0.132
96 263482_at AT2G03980 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.269 0.286
97 252432_at AT3G47680 [DNA binding] -0.268 -0.023
98 263552_x_at AT2G24980 EXT6, extensin 6 -0.260 -0.098
99 256027_at AT1G34160 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.259 0.022
100 256569_at AT3G19550 unknown -0.251 0.577
101 261562_at AT1G01750 ADF11, actin depolymerizing factor 11 -0.250 -0.016
102 252916_at AT4G38950 [ATP binding microtubule motor family protein] -0.248 -0.588
103 261449_at AT1G21120 IGMT2, indole glucosinolate O-methyltransferase 2 -0.243 0.186
104 267622_at AT2G39690 unknown -0.243 -0.180
105 261151_at AT1G19650 [Sec14p-like phosphatidylinositol transfer family protein] -0.242 0.027
106 247463_at AT5G62210 [Embryo-specific protein 3, (ATS3)] -0.239 -0.277
107 259195_at AT3G01730 unknown -0.231 -0.010
108 261447_at AT1G21160 [eukaryotic translation initiation factor 2 (eIF-2) family protein] -0.227 -0.081
109 251135_at AT5G01280 unknown -0.226 -0.020
110 264029_at AT2G03720 MRH6, morphogenesis of root hair 6 -0.225 -0.005
111 262553_at AT1G31360 ATRECQ2, ARABIDOPSIS THALIANA RECQ 2, MED34, RECQL2, RECQ helicase L2 -0.224 -0.060
112 252046_at AT3G52460 [hydroxyproline-rich glycoprotein family protein] -0.220 -0.007
113 263458_at AT2G22290 ATRAB-H1D, ARABIDOPSIS RAB GTPASE HOMOLOG H1D, ATRAB6, ARABIDOPSIS RAB GTPASE HOMOLOG 6, ATRABH1D, RAB GTPase homolog H1D, RAB-H1D, RAB GTPASE HOMOLOG H1D, RABH1d, RAB GTPase homolog H1D -0.219 -0.014
114 260660_at AT1G19485 [Transducin/WD40 repeat-like superfamily protein] -0.212 -0.168
115 261033_at AT1G17380 JAZ5, jasmonate-zim-domain protein 5, TIFY11A -0.210 0.981
116 251863_at AT3G54870 ARK1, ARMADILLO REPEAT-CONTAINING KINESIN 1, AtKINUc, Arabidopsis thaliana KINESIN Ungrouped clade, gene A, CAE1, CA-ROP2 ENHANCER 1, MRH2, MORPHOGENESIS OF ROOT HAIR 2 -0.208 -0.027
117 245967_at AT5G19800 [hydroxyproline-rich glycoprotein family protein] -0.207 0.012
118 248400_at AT5G52020 [Integrase-type DNA-binding superfamily protein] -0.204 0.280
119 247649_at AT5G60030 unknown -0.190 0.025
120 260502_at AT1G47270 AtTLP6, tubby like protein 6, TLP6, tubby like protein 6 -0.187 -0.125
121 257459_at AT1G24040 [Acyl-CoA N-acyltransferases (NAT) superfamily protein] -0.186 -0.144
122 263194_at AT1G36060 [Integrase-type DNA-binding superfamily protein] -0.177 -0.045
123 253622_at AT4G30560 ATCNGC9, cyclic nucleotide gated channel 9, CNGC9, cyclic nucleotide gated channel 9 -0.177 0.006
124 250243_at AT5G13630 ABAR, ABA-BINDING PROTEIN, CCH, CONDITIONAL CHLORINA, CCH1, CHLH, H SUBUNIT OF MG-CHELATASE, GUN5, GENOMES UNCOUPLED 5 -0.174 -0.197
125 264100_at AT1G78970 ATLUP1, ARABIDOPSIS THALIANA LUPEOL SYNTHASE 1, LUP1, lupeol synthase 1 -0.173 -0.187
126 253956_at AT4G26700 ATFIM1, ARABIDOPSIS THALIANA FIMBRIN 1, FIM1, fimbrin 1 -0.171 0.096
127 249724_at AT5G35450 [Disease resistance protein (CC-NBS-LRR class) family] -0.170 -0.362
128 259529_at AT1G12400 [Nucleotide excision repair, TFIIH, subunit TTDA] -0.167 0.005
129 250778_at AT5G05500 MOP10 -0.164 0.001
130 255105_at AT4G08620 SULTR1;1, sulphate transporter 1;1 -0.164 -0.082
131 264580_at AT1G05340 unknown -0.163 0.981
132 248794_at AT5G47220 ATERF-2, ETHYLENE RESPONSE FACTOR- 2, ATERF2, ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 2, ERF2, ethylene responsive element binding factor 2 -0.158 0.598
133 246988_at AT5G67340 [ARM repeat superfamily protein] -0.157 0.622