4.0:Information of module
35S::RSL4
In comparison with root epidermis and lateral root cap -S help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0015706 nitrate transport BP 1.245e-09
GO:0006811 ion transport BP 1.639e-09
GO:0042221 response to chemical BP 2.531e-09
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0010200 response to chitin BP 1.770e-21
GO:0010243 response to organonitrogen compound BP 1.082e-20
GO:1901698 response to nitrogen compound BP 9.617e-14
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
35S::RSL4		 Log2 signal ratio
root epidermis and lateral root cap -S
1 261647_at AT1G27740 RSL4, root hair defective 6-like 4 0.549 -0.426
2 249686_at AT5G36140 CYP716A2, cytochrome P450, family 716, subfamily A, polypeptide 2 0.535 -0.372
3 247327_at AT5G64120 AtPRX71, PRX71, peroxidase 71 0.425 -0.248
4 249102_at AT5G43590 [Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein] 0.419 -0.353
5 251176_at AT3G63380 [ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein] 0.334 0.068
6 245036_at AT2G26410 Iqd4, IQ-domain 4 0.329 -0.142
7 266674_at AT2G29620 unknown 0.297 -0.746
8 253763_at AT4G28850 ATXTH26, XTH26, xyloglucan endotransglucosylase/hydrolase 26 0.289 -0.098
9 254107_at AT4G25220 AtG3Pp2, glycerol-3-phosphate permease 2, G3Pp2, glycerol-3-phosphate permease 2, RHS15, root hair specific 15 0.261 0.300
10 267497_at AT2G30540 [Thioredoxin superfamily protein] 0.260 0.019
11 259720_at AT1G61080 [Hydroxyproline-rich glycoprotein family protein] 0.258 0.035
12 249800_at AT5G23660 AtSWEET12, MTN3, homolog of Medicago truncatula MTN3, SWEET12 0.254 0.032
13 266992_at AT2G39200 ATMLO12, MILDEW RESISTANCE LOCUS O 12, MLO12, MILDEW RESISTANCE LOCUS O 12 0.240 -0.366
14 253353_at AT4G33730 [CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein] 0.231 -0.537
15 247781_at AT5G58784 [Undecaprenyl pyrophosphate synthetase family protein] 0.229 -0.423
16 249773_at AT5G24140 SQP2, squalene monooxygenase 2 0.228 0.016
17 254347_at AT4G22070 ATWRKY31, WRKY31, WRKY DNA-binding protein 31 0.226 -0.229
18 250744_at AT5G05840 unknown 0.220 -0.319
19 258133_at AT3G24500 ATMBF1C, MBF1C, multiprotein bridging factor 1C 0.218 -0.385
20 259120_at AT3G02240 GLV4, GOLVEN 4, RGF7, root meristem growth factor 7 0.218 -0.777
21 257049_at AT3G15250 unknown 0.215 0.097
22 249037_at AT5G44130 FLA13, FASCICLIN-like arabinogalactan protein 13 precursor 0.215 -0.764
23 260758_at AT1G48930 AtGH9C1, glycosyl hydrolase 9C1, GH9C1, glycosyl hydrolase 9C1 0.211 -0.337
24 252872_at AT4G40010 SNRK2-7, SUCROSE NONFERMENTING 1-RELATED PROTEIN KINASE 2-7, SNRK2.7, SNF1-related protein kinase 2.7, SRK2F 0.203 -0.206
25 264832_at AT1G03660 [Ankyrin-repeat containing protein] 0.201 -0.560
26 254025_at AT4G25790 [CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein] 0.201 -0.297
27 248725_at AT5G47980 [HXXXD-type acyl-transferase family protein] 0.199 -0.325
28 262865_at AT1G64930 CYP89A7, cytochrome P450, family 87, subfamily A, polypeptide 7 0.198 -0.103
29 247229_at AT5G65160 TPR14, tetratricopeptide repeat 14 0.193 -0.313
30 253910_at AT4G27290 [S-locus lectin protein kinase family protein] 0.191 -0.397
31 247531_at AT5G61550 [U-box domain-containing protein kinase family protein] 0.189 -0.554
32 253161_at AT4G35770 ATSEN1, ARABIDOPSIS THALIANA SENESCENCE 1, DIN1, DARK INDUCIBLE 1, SEN1, SENESCENCE 1, SEN1, SENESCENCE ASSOCIATED GENE 1 0.189 -0.083
33 264574_at AT1G05300 ZIP5, zinc transporter 5 precursor 0.186 -0.015
34 245245_at AT1G44318 hemb2 0.181 -0.325
35 248686_at AT5G48540 [receptor-like protein kinase-related family protein] 0.181 -0.242
36 251577_at AT3G58350 RTM3, RESTRICTED TEV MOVEMENT 3 0.181 0.397
37 258984_at AT3G08970 ATERDJ3A, TMS1, THERMOSENSITIVE MALE STERILE 1 0.181 -0.362
38 261663_at AT1G18330 EPR1, EARLY-PHYTOCHROME-RESPONSIVE1, RVE7, REVEILLE 7 0.180 -0.207
39 264391_at AT1G11920 [Pectin lyase-like superfamily protein] 0.180 0.001
40 258182_at AT3G21500 DXL1, DXS-like 1, DXPS1, 1-deoxy-D-xylulose 5-phosphate synthase 1, DXS2, 1-deoxy-D-xylulose 5-phosphate (DXP) synthase 2 0.179 0.015
41 246888_at AT5G26270 unknown 0.179 -0.249
42 267128_at AT2G23620 ATMES1, ARABIDOPSIS THALIANA METHYL ESTERASE 1, MES1, methyl esterase 1 0.179 -0.651
43 264940_at AT1G60470 AtGolS4, galactinol synthase 4, GolS4, galactinol synthase 4 0.179 -0.038
44 253734_at AT4G29180 RHS16, root hair specific 16 0.178 -0.583
45 250793_at AT5G05600 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] 0.177 -0.130
46 251096_at AT5G01550 LecRK-VI.3, L-type lectin receptor kinase VI.3, LECRKA4.2, lectin receptor kinase a4.1 0.177 -0.317
47 255648_at AT4G00910 [Aluminium activated malate transporter family protein] 0.176 -0.106
48 254850_at AT4G12000 [SNARE associated Golgi protein family] 0.176 0.049
49 249097_at AT5G43520 [Cysteine/Histidine-rich C1 domain family protein] 0.175 -1.054
50 252494_at AT3G46760 LecRK-S.3, L-type lectin receptor kinase S.3 0.175 -0.590
51 251405_at AT3G60330 AHA7, H(+)-ATPase 7, HA7, H(+)-ATPase 7 0.173 -0.636
52 247617_at AT5G60270 LecRK-I.7, L-type lectin receptor kinase I.7 0.172 -0.551
53 259576_at AT1G35330 [RING/U-box superfamily protein] 0.172 -0.594
54 250037_at AT5G18350 [Disease resistance protein (TIR-NBS-LRR class) family] 0.171 -0.090
55 255620_at AT4G01380 [plastocyanin-like domain-containing protein] 0.169 0.029
56 251466_at AT3G59340 unknown 0.169 -0.514
57 260948_at AT1G06100 [Fatty acid desaturase family protein] 0.168 -0.278
58 252437_at AT3G47380 [Plant invertase/pectin methylesterase inhibitor superfamily protein] 0.165 -0.103
59 261459_at AT1G21100 IGMT1, indole glucosinolate O-methyltransferase 1 0.163 -0.489
60 254258_at AT4G23410 TET5, tetraspanin5 0.163 0.137
61 258063_at AT3G14620 CYP72A8, cytochrome P450, family 72, subfamily A, polypeptide 8 0.162 -0.041
62 250680_at AT5G06570 [alpha/beta-Hydrolases superfamily protein] 0.158 -0.377
63 260201_at AT1G67600 [Acid phosphatase/vanadium-dependent haloperoxidase-related protein] 0.158 -0.216
64 258907_at AT3G06370 ATNHX4, NHX4, sodium hydrogen exchanger 4 0.156 -0.173
65 254562_at AT4G19230 CYP707A1, cytochrome P450, family 707, subfamily A, polypeptide 1 0.156 -0.155
66 265582_at AT2G20030 [RING/U-box superfamily protein] 0.155 -0.221
67 250632_at AT5G07450 CYCP4;3, cyclin p4;3 0.154 -0.482
68 254550_at AT4G19690 ATIRT1, ARABIDOPSIS IRON-REGULATED TRANSPORTER 1, IRT1, iron-regulated transporter 1 -0.698 -0.074
69 253259_at AT4G34410 RRTF1, redox responsive transcription factor 1 -0.693 -0.180
70 261892_at AT1G80840 ATWRKY40, WRKY40, WRKY DNA-binding protein 40 -0.596 -0.105
71 262211_at AT1G74930 ORA47 -0.582 -0.406
72 248684_at AT5G48485 DIR1, DEFECTIVE IN INDUCED RESISTANCE 1 -0.567 0.037
73 247925_at AT5G57560 TCH4, Touch 4, XTH22, xyloglucan endotransglucosylase/hydrolase 22 -0.527 -0.088
74 254120_at AT4G24570 DIC2, dicarboxylate carrier 2 -0.494 -0.335
75 254075_at AT4G25470 ATCBF2, CBF2, C-repeat/DRE binding factor 2, DREB1C, DRE/CRT-BINDING PROTEIN 1C, FTQ4, FREEZING TOLERANCE QTL 4 -0.456 0.212
76 253643_at AT4G29780 unknown -0.427 0.010
77 252679_at AT3G44260 AtCAF1a, CCR4- associated factor 1a, CAF1a, CCR4- associated factor 1a -0.421 -0.351
78 262373_at AT1G73120 unknown -0.404 -0.073
79 258606_at AT3G02840 [ARM repeat superfamily protein] -0.401 -0.270
80 250098_at AT5G17350 unknown -0.389 -0.563
81 248448_at AT5G51190 [Integrase-type DNA-binding superfamily protein] -0.380 -0.340
82 261648_at AT1G27730 STZ, salt tolerance zinc finger, ZAT10 -0.366 -0.294
83 252557_at AT3G45960 ATEXLA3, expansin-like A3, ATEXPL3, ATHEXP BETA 2.3, EXLA3, expansin-like A3, EXPL3 -0.354 0.036
84 248822_at AT5G47000 [Peroxidase superfamily protein] -0.350 0.032
85 256009_at AT1G19210 [Integrase-type DNA-binding superfamily protein] -0.329 -0.497
86 258947_at AT3G01830 [Calcium-binding EF-hand family protein] -0.325 -0.836
87 266821_at AT2G44840 ATERF13, ETHYLENE-RESPONSIVE ELEMENT BINDING FACTOR 13, EREBP, ERF13, ethylene-responsive element binding factor 13 -0.324 -0.036
88 245777_at AT1G73540 atnudt21, nudix hydrolase homolog 21, NUDT21, nudix hydrolase homolog 21 -0.304 -0.379
89 259879_at AT1G76650 CML38, calmodulin-like 38 -0.302 -0.428
90 263783_at AT2G46400 ATWRKY46, WRKY DNA-BINDING PROTEIN 46, WRKY46, WRKY DNA-binding protein 46 -0.298 -0.196
91 256825_at AT3G22120 CWLP, cell wall-plasma membrane linker protein -0.292 0.044
92 260221_at AT1G74670 GASA6, GA-stimulated Arabidopsis 6 -0.276 0.024
93 253502_at AT4G31940 CYP82C4, cytochrome P450, family 82, subfamily C, polypeptide 4 -0.264 -0.024
94 254231_at AT4G23810 ATWRKY53, WRKY53 -0.245 -0.520
95 264100_at AT1G78970 ATLUP1, ARABIDOPSIS THALIANA LUPEOL SYNTHASE 1, LUP1, lupeol synthase 1 -0.233 0.034
96 253871_at AT4G27440 PORB, protochlorophyllide oxidoreductase B -0.226 -0.053
97 254926_at AT4G11280 ACS6, 1-aminocyclopropane-1-carboxylic acid (acc) synthase 6, ATACS6 -0.223 0.006
98 251677_at AT3G56980 BHLH039, bHLH39, basic helix-loop-helix 39, ORG3, OBP3-RESPONSIVE GENE 3 -0.214 0.130
99 251229_at AT3G62740 BGLU7, beta glucosidase 7 -0.207 -0.012
100 247208_at AT5G64870 [SPFH/Band 7/PHB domain-containing membrane-associated protein family] -0.207 -0.116
101 253915_at AT4G27280 [Calcium-binding EF-hand family protein] -0.205 0.140
102 248794_at AT5G47220 ATERF-2, ETHYLENE RESPONSE FACTOR- 2, ATERF2, ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 2, ERF2, ethylene responsive element binding factor 2 -0.203 -0.198
103 264837_at AT1G03600 PSB27 -0.201 -0.097
104 248186_at AT5G53880 unknown -0.201 0.058
105 247543_at AT5G61600 ERF104, ethylene response factor 104 -0.199 -0.292
106 264185_at AT1G54780 AtTLP18.3, TLP18.3, thylakoid lumen protein 18.3 -0.193 -0.046
107 265122_at AT1G62540 FMO GS-OX2, flavin-monooxygenase glucosinolate S-oxygenase 2 -0.192 -0.027
108 247358_at AT5G63580 ATFLS2, FLS2, flavonol synthase 2 -0.191 -0.009
109 255422_at AT4G03270 CYCD6;1, Cyclin D6;1 -0.189 0.022
110 261470_at AT1G28370 ATERF11, ERF DOMAIN PROTEIN 11, ERF11, ERF domain protein 11 -0.187 0.035
111 261907_at AT1G65060 4CL3, 4-coumarate:CoA ligase 3 -0.175 -0.216
112 249928_at AT5G22250 AtCAF1b, CCR4- associated factor 1b, CAF1b, CCR4- associated factor 1b -0.173 -0.734
113 248964_at AT5G45340 CYP707A3, cytochrome P450, family 707, subfamily A, polypeptide 3 -0.173 -0.276
114 265349_at AT2G22610 [Di-glucose binding protein with Kinesin motor domain] -0.171 0.510
115 252073_at AT3G51750 unknown -0.169 0.272
116 248886_at AT5G46110 APE2, ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT 2, TPT, triose-phosphate ⁄ phosphate translocator -0.166 0.090
117 245250_at AT4G17490 ATERF6, ethylene responsive element binding factor 6, ERF-6-6, ERF6, ethylene responsive element binding factor 6 -0.166 -0.326
118 261638_at AT1G49975 [INVOLVED IN: photosynthesis] -0.166 -0.092
119 245731_at AT1G73500 ATMKK9, MKK9, MAP kinase kinase 9 -0.164 0.187
120 252131_at AT3G50930 BCS1, cytochrome BC1 synthesis -0.163 0.166
121 247659_at AT5G60040 NRPC1, nuclear RNA polymerase C1 -0.161 0.404
122 247882_at AT5G57785 unknown -0.160 -0.855
123 263232_at AT1G05700 [Leucine-rich repeat transmembrane protein kinase protein] -0.159 0.101
124 255572_at AT4G01050 TROL, thylakoid rhodanese-like -0.159 0.023
125 260353_at AT1G69230 SP1L2, SPIRAL1-like2 -0.157 -0.009
126 262970_at AT1G75690 LQY1, LOW QUANTUM YIELD OF PHOTOSYSTEM II 1 -0.156 -0.174
127 254066_at AT4G25480 ATCBF3, CBF3, C-REPEAT BINDING FACTOR 3, DREB1A, dehydration response element B1A -0.154 0.444
128 256569_at AT3G19550 unknown -0.152 0.042
129 246576_at AT1G31650 ATROPGEF14, ROPGEF14, ROP (rho of plants) guanine nucleotide exchange factor 14 -0.152 0.078
130 252060_at AT3G52430 ATPAD4, ARABIDOPSIS PHYTOALEXIN DEFICIENT 4, PAD4, PHYTOALEXIN DEFICIENT 4 -0.151 -0.516
131 264864_at AT1G24310 unknown -0.150 0.332
132 257143_at AT3G20110 CYP705A20, cytochrome P450, family 705, subfamily A, polypeptide 20 -0.150 0.214
133 255265_at AT4G05190 ATK5, kinesin 5 -0.148 0.645