4.0:Information of module
Dry late day
In comparison with seedlings by volatiles from leafminer damaged Lima bean 48h help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0042440 pigment metabolic process BP 1.386e-11
GO:0010224 response to UV-B BP 2.112e-10
GO:0044281 small molecule metabolic process BP 1.626e-09
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0044281 small molecule metabolic process BP 2.424e-07
GO:1901564 organonitrogen compound metabolic proces... BP 4.115e-07
GO:0006732 coenzyme metabolic process BP 2.140e-06
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
Dry late day		 Log2 signal ratio
seedlings by volatiles from leafminer damaged Lima bean 48h
1 264400_at AT1G61800 ATGPT2, ARABIDOPSIS GLUCOSE-6-PHOSPHATE/PHOSPHATE TRANSLOCATOR 2, GPT2, glucose-6-phosphate/phosphate translocator 2 0.770 0.372
2 260140_at AT1G66390 ATMYB90, MYB90, myb domain protein 90, PAP2, PRODUCTION OF ANTHOCYANIN PIGMENT 2 0.696 0.744
3 245628_at AT1G56650 ATMYB75, MYB DOMAIN PROTEIN 75, MYB75, MYELOBLASTOSIS PROTEIN 75, PAP1, production of anthocyanin pigment 1, SIAA1, SUC-INDUCED ANTHOCYANIN ACCUMULATION 1 0.528 0.329
4 245624_at AT4G14090 [UDP-Glycosyltransferase superfamily protein] 0.474 0.572
5 256924_at AT3G29590 AT5MAT 0.449 0.252
6 248185_at AT5G54060 UF3GT, UDP-glucose:flavonoid 3-o-glucosyltransferase, UGT79B1, UDP-glucosyl transferase 79B1 0.410 0.555
7 254189_at AT4G24000 ATCSLG2, ARABIDOPSIS THALIANA CELLULOSE SYNTHASE LIKE G2, CSLG2, cellulose synthase like G2 0.386 0.292
8 249215_at AT5G42800 DFR, dihydroflavonol 4-reductase, M318, TT3 0.363 0.722
9 250083_at AT5G17220 ATGSTF12, ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE PHI 12, GST26, GLUTATHIONE S-TRANSFERASE 26, GSTF12, glutathione S-transferase phi 12, TT19, TRANSPARENT TESTA 19 0.346 0.678
10 250207_at AT5G13930 ATCHS, CHS, CHALCONE SYNTHASE, TT4, TRANSPARENT TESTA 4 0.334 0.527
11 247751_at AT5G59050 unknown 0.321 -0.044
12 265913_at AT2G25625 unknown 0.313 0.186
13 257925_at AT3G23170 unknown 0.289 -0.041
14 251272_at AT3G61890 ATHB-12, homeobox 12, ATHB12, ARABIDOPSIS THALIANA HOMEOBOX 12, HB-12, homeobox 12 0.274 -0.189
15 246468_at AT5G17050 UGT78D2, UDP-glucosyl transferase 78D2 0.274 0.159
16 251644_at AT3G57540 [Remorin family protein] 0.270 0.164
17 253219_at AT4G34990 AtMYB32, myb domain protein 32, MYB32, myb domain protein 32 0.270 0.131
18 250533_at AT5G08640 ATFLS1, FLS, FLAVONOL SYNTHASE, FLS1, flavonol synthase 1 0.255 0.334
19 251827_at AT3G55120 A11, AtCHI, CFI, CHALCONE FLAVANONE ISOMERASE, CHI, chalcone isomerase, TT5, TRANSPARENT TESTA 5 0.250 0.162
20 266488_at AT2G47670 PMEI6, PECTIN METHYLESTERASE INHIBITOR 6 0.246 0.068
21 258962_at AT3G10570 CYP77A6, cytochrome P450, family 77, subfamily A, polypeptide 6 0.242 0.058
22 260203_at AT1G52890 ANAC019, NAC domain containing protein 19, NAC019, NAC domain containing protein 19 0.240 0.260
23 249601_at AT5G37980 [Zinc-binding dehydrogenase family protein] 0.239 0.019
24 265359_at AT2G16720 ATMYB7, ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 7, ATY49, MYB7, myb domain protein 7 0.237 0.042
25 266617_at AT2G29670 [Tetratricopeptide repeat (TPR)-like superfamily protein] 0.234 -0.019
26 256603_at AT3G28270 unknown 0.233 0.100
27 261785_at AT1G08230 [Transmembrane amino acid transporter family protein] 0.229 0.044
28 258932_at AT3G10150 ATPAP16, PAP16, purple acid phosphatase 16 0.227 0.169
29 260851_at AT1G21890 UMAMIT19, Usually multiple acids move in and out Transporters 19 0.226 -0.068
30 252888_at AT4G39210 APL3 0.224 0.350
31 258362_at AT3G14280 unknown 0.220 -0.110
32 254186_at AT4G24010 ATCSLG1, ARABIDOPSIS THALIANA CELLULOSE SYNTHASE LIKE G1, CSLG1, cellulose synthase like G1 0.218 0.069
33 264692_at AT1G70000 [myb-like transcription factor family protein] 0.213 0.154
34 257876_at AT3G17130 [Plant invertase/pectin methylesterase inhibitor superfamily protein] 0.211 -0.025
35 259970_at AT1G76570 AtLHCB7, LHCB7, light-harvesting complex B7 0.210 -0.072
36 262803_at AT1G21000 [PLATZ transcription factor family protein] 0.207 0.017
37 260156_at AT1G52880 ANAC018, Arabidopsis NAC domain containing protein 18, ATNAM, NAM, NO APICAL MERISTEM, NARS2, NAC-REGULATED SEED MORPHOLOGY 2 0.207 0.087
38 255430_at AT4G03320 AtTic20-IV, translocon at the inner envelope membrane of chloroplasts 20-IV, Tic20-IV, translocon at the inner envelope membrane of chloroplasts 20-IV 0.203 0.135
39 255294_at AT4G04750 [Major facilitator superfamily protein] 0.201 -0.008
40 264580_at AT1G05340 unknown 0.200 -0.119
41 262073_at AT1G59640 BPE, BIG PETAL, BPEp, BIG PETAL P, BPEub, BIG PETAL UB, ZCW32 0.196 0.091
42 251301_at AT3G61880 CYP78A9, cytochrome p450 78a9 0.196 -0.037
43 254707_at AT4G18010 5PTASE2, myo-inositol polyphosphate 5-phosphatase 2, AT5PTASE2, myo-inositol polyphosphate 5-phosphatase 2, IP5PII, INOSITOL(1,4,5)P3 5-PHOSPHATASE II 0.195 0.060
44 260357_at AT1G69260 AFP1, ABI five binding protein 0.195 -0.002
45 245348_at AT4G17770 ATTPS5, trehalose phosphatase/synthase 5, TPS5, TREHALOSE -6-PHOSPHATASE SYNTHASE S5, TPS5, trehalose phosphatase/synthase 5 0.195 0.071
46 255795_at AT2G33380 AtCLO3, Arabidopsis thaliana caleosin 3, CLO-3, caleosin 3, CLO3, caleosin 3, RD20, RESPONSIVE TO DESSICATION 20 0.194 0.240
47 260840_at AT1G29050 TBL38, TRICHOME BIREFRINGENCE-LIKE 38 0.194 0.051
48 252470_at AT3G46930 [Protein kinase superfamily protein] 0.194 0.109
49 251109_at AT5G01600 ATFER1, ARABIDOPSIS THALIANA FERRETIN 1, FER1, ferretin 1 0.193 -0.075
50 254697_at AT4G17970 ALMT12, aluminum-activated, malate transporter 12, ATALMT12, QUAC1, quick-activating anion channel 1 0.189 -0.010
51 245740_at AT1G44100 AAP5, amino acid permease 5 0.189 0.097
52 253172_at AT4G35060 HIPP25, heavy metal associated isoprenylated plant protein 25 0.189 0.021
53 249134_at AT5G43150 unknown 0.188 0.076
54 264879_at AT1G61260 unknown 0.187 -0.068
55 252269_at AT3G49580 LSU1, RESPONSE TO LOW SULFUR 1 0.186 0.578
56 249410_at AT5G40380 CRK42, cysteine-rich RLK (RECEPTOR-like protein kinase) 42 0.186 -0.128
57 264999_at AT1G67310 [Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains] 0.185 -0.093
58 253946_at AT4G26790 [GDSL-like Lipase/Acylhydrolase superfamily protein] 0.184 -0.002
59 251739_at AT3G56170 CAN, Ca-2+ dependent nuclease, CAN1, calcium dependent nuclease 1 0.183 -0.028
60 255585_at AT4G01550 ANAC069, NAC domain containing protein 69, NAC069, NAC domain containing protein 69, NTM2, NAC with Transmembrane Motif 2 0.183 0.061
61 261832_at AT1G10650 [SBP (S-ribonuclease binding protein) family protein] 0.182 0.055
62 262164_at AT1G78070 [Transducin/WD40 repeat-like superfamily protein] 0.182 -0.081
63 266480_at AT2G31130 unknown 0.180 0.009
64 251084_at AT5G01520 AIRP2, ABA Insensitive RING Protein 2, AtAIRP2 0.177 -0.130
65 251235_at AT3G62860 [alpha/beta-Hydrolases superfamily protein] 0.176 -0.088
66 261957_at AT1G64660 ATMGL, methionine gamma-lyase, MGL, methionine gamma-lyase 0.173 -0.029
67 265122_at AT1G62540 FMO GS-OX2, flavin-monooxygenase glucosinolate S-oxygenase 2 0.172 0.360
68 257074_at AT3G19660 unknown 0.171 0.077
69 258091_at AT3G14560 unknown 0.170 0.052
70 261056_at AT1G01360 PYL9, PYRABACTIN RESISTANCE 1-LIKE 9, RCAR1, regulatory component of ABA receptor 1 0.169 -0.040
71 250811_at AT5G05110 [Cystatin/monellin family protein] 0.169 0.018
72 249944_at AT5G22290 anac089, NAC domain containing protein 89, FSQ6, fructose-sensing quantitative trait locus 6, NAC089, NAC domain containing protein 89 0.169 0.027
73 259953_at AT1G74810 BOR5, REQUIRES HIGH BORON 5 0.165 0.239
74 247577_at AT5G61290 [Flavin-binding monooxygenase family protein] 0.164 -0.046
75 261399_at AT1G79620 [Leucine-rich repeat protein kinase family protein] 0.163 -0.028
76 260054_at AT1G78130 UNE2, unfertilized embryo sac 2 0.163 -0.059
77 250400_at AT5G10740 [Protein phosphatase 2C family protein] 0.162 0.033
78 258119_at AT3G14720 ATMPK19, ARABIDOPSIS THALIANA MAP KINASE 19, MPK19, MAP kinase 19 0.159 -0.037
79 251011_at AT5G02560 HTA12, histone H2A 12 0.159 -0.019
80 263805_at AT2G40400 unknown -0.451 -0.043
81 252374_at AT3G48100 ARR5, response regulator 5, ATRR2, ARABIDOPSIS THALIANA RESPONSE REGULATOR 2, IBC6, INDUCED BY CYTOKININ 6, RR5, response regulator 5 -0.384 -0.231
82 247406_at AT5G62920 ARR6, response regulator 6 -0.305 -0.119
83 245504_at AT4G15660 [Thioredoxin superfamily protein] -0.277 -0.059
84 261684_at AT1G47400 unknown -0.273 0.290
85 265161_at AT1G30900 BP80-3;3, binding protein of 80 kDa 3;3, VSR3;3, VACUOLAR SORTING RECEPTOR 3;3, VSR6, VACUOLAR SORTING RECEPTOR 6 -0.243 0.045
86 245506_at AT4G15700 [Thioredoxin superfamily protein] -0.230 -0.026
87 267462_at AT2G33735 [Chaperone DnaJ-domain superfamily protein] -0.224 0.033
88 245411_at AT4G17240 unknown -0.224 -0.048
89 264114_at AT2G31270 ATCDT1A, ARABIDOPSIS HOMOLOG OF YEAST CDT1 A, CDT1, ARABIDOPSIS HOMOLOG OF YEAST CDT1, CDT1A, homolog of yeast CDT1 A -0.220 -0.017
90 251538_at AT3G58660 [Ribosomal protein L1p/L10e family] -0.219 0.091
91 246943_at AT5G25440 [Protein kinase superfamily protein] -0.217 -0.036
92 264357_at AT1G03360 ATRRP4, ribosomal RNA processing 4, RRP4, ribosomal RNA processing 4 -0.208 0.082
93 248065_at AT5G55580 [Mitochondrial transcription termination factor family protein] -0.207 0.045
94 259632_at AT1G56430 ATNAS4, ARABIDOPSIS THALIANA NICOTIANAMINE SYNTHASE 4, NAS4, nicotianamine synthase 4 -0.207 0.305
95 250560_at AT5G08020 ATRPA70B, ARABIDOPSIS THALIANA RPA70-KDA SUBUNIT B, RPA70B, RPA70-kDa subunit B -0.204 -0.000
96 258828_at AT3G07130 ATPAP15, PURPLE ACID PHOSPHATASE 15, PAP15, purple acid phosphatase 15 -0.199 0.014
97 258009_at AT3G19440 [Pseudouridine synthase family protein] -0.179 0.103
98 256324_at AT1G66760 [MATE efflux family protein] -0.173 -0.087
99 254284_at AT4G22910 CCS52A1, cell cycle switch protein 52 A1, FZR2, FIZZY-related 2 -0.171 0.075
100 257100_at AT3G25010 AtRLP41, receptor like protein 41, RLP41, receptor like protein 41 -0.169 0.149
101 249637_at AT5G36900 unknown -0.167 -0.062
102 245154_at AT5G12460 unknown -0.166 -0.010
103 251271_at AT3G62050 [Putative endonuclease or glycosyl hydrolase] -0.166 0.087
104 248295_at AT5G53070 [Ribosomal protein L9/RNase H1] -0.165 0.084
105 263318_at AT2G24762 AtGDU4, glutamine dumper 4, GDU4, glutamine dumper 4 -0.164 -0.014
106 254660_at AT4G18250 [receptor serine/threonine kinase, putative] -0.162 0.145
107 259643_at AT1G68890 PHYLLO, PHYLLO -0.160 0.003
108 253925_at AT4G26690 GDPDL3, Glycerophosphodiester phosphodiesterase (GDPD) like 3, GPDL2, GLYCEROPHOSPHODIESTERASE-LIKE 2, MRH5, MUTANT ROOT HAIR 5, SHV3, SHAVEN 3 -0.159 -0.122
109 248270_at AT5G53450 ORG1, OBP3-responsive gene 1 -0.157 0.075
110 260667_at AT1G19440 KCS4, 3-ketoacyl-CoA synthase 4 -0.156 -0.003
111 250084_at AT5G17240 SDG40, SET domain group 40 -0.156 0.108
112 256910_at AT3G24080 [KRR1 family protein] -0.155 0.058
113 258898_at AT3G05740 RECQI1, RECQ helicase l1 -0.152 -0.007
114 249862_at AT5G22920 [CHY-type/CTCHY-type/RING-type Zinc finger protein] -0.152 -0.190
115 248841_at AT5G46740 UBP21, ubiquitin-specific protease 21 -0.151 0.019
116 263435_at AT2G28600 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.150 0.035
117 252147_at AT3G51270 [protein serine/threonine kinases] -0.149 -0.008
118 253974_at AT4G26540 [Leucine-rich repeat receptor-like protein kinase family protein] -0.149 -0.106
119 245828_at AT1G57820 ORTH2, ORTHRUS 2, VIM1, VARIANT IN METHYLATION 1 -0.148 -0.043
120 245164_at AT2G33210 HSP60-2, heat shock protein 60-2 -0.147 0.072
121 251593_at AT3G57660 NRPA1, nuclear RNA polymerase A1 -0.146 0.023
122 248460_at AT5G50915 [basic helix-loop-helix (bHLH) DNA-binding superfamily protein] -0.146 0.173
123 253973_at AT4G26555 [FKBP-like peptidyl-prolyl cis-trans isomerase family protein] -0.145 -0.085
124 252684_at AT3G44400 [Disease resistance protein (TIR-NBS-LRR class) family] -0.144 -0.056
125 253207_at AT4G34770 SAUR1, SMALL AUXIN UPREGULATED RNA 1 -0.143 0.071
126 262696_at AT1G75870 unknown -0.143 0.083
127 251378_at AT3G60660 unknown -0.142 0.036
128 265250_at AT2G01950 BRL2, BRI1-like 2, VH1, VASCULAR HIGHWAY 1 -0.142 -0.087
129 260970_at AT1G53640 unknown -0.142 0.014
130 248776_at AT5G47900 unknown -0.142 -0.060
131 248691_at AT5G48310 unknown -0.141 -0.053
132 248528_at AT5G50760 SAUR55, SMALL AUXIN UPREGULATED RNA 55 -0.140 0.177
133 257621_at AT3G20410 CPK9, calmodulin-domain protein kinase 9 -0.139 -0.010
134 250753_at AT5G05860 UGT76C2, UDP-glucosyl transferase 76C2 -0.138 -0.043
135 263594_at AT2G01880 ATPAP7, PURPLE ACID PHOSPHATASE 7, PAP7, purple acid phosphatase 7 -0.138 0.164
136 246478_at AT5G15980 [Pentatricopeptide repeat (PPR) superfamily protein] -0.137 0.063
137 257188_at AT3G13150 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.136 0.063
138 251807_at AT3G55400 OVA1, OVULE ABORTION 1 -0.135 0.041
139 258871_at AT3G03060 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.133 0.126
140 262657_at AT1G14210 [Ribonuclease T2 family protein] -0.132 0.010
141 246094_at AT5G19300 unknown -0.131 0.110
142 259703_at AT1G77790 [Glycosyl hydrolase superfamily protein] -0.131 0.043
143 253592_at AT4G30840 [Transducin/WD40 repeat-like superfamily protein] -0.130 0.062
144 252574_at AT3G45430 LecRK-I.5, L-type lectin receptor kinase I.5 -0.129 -0.125
145 255282_at AT4G04600 [copia-like retrotransposon family, has a 0. P-value blast match to GB:CAA31653 polyprotein (Ty1_Copia-element) (Arabidopsis thaliana)] -0.128 -0.060
146 266957_at AT2G34640 HMR, HEMERA, PTAC12, plastid transcriptionally active 12, TAC12 -0.128 0.021
147 252148_at AT3G51280 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.127 -0.012
148 261032_at AT1G17430 [alpha/beta-Hydrolases superfamily protein] -0.126 -0.004
149 266489_at AT2G35190 ATNPSN11, NPSN11, novel plant snare 11, NSPN11 -0.125 0.021
150 245614_at AT4G14460 [copia-like retrotransposon family, has a 4.2e-253 P-value blast match to GB:CAA72989 open reading frame 1 (Ty1_Copia-element) (Brassica oleracea)] -0.125 0.006
151 251496_at AT3G59040 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.124 -0.002
152 258402_at AT3G15450 [Aluminium induced protein with YGL and LRDR motifs] -0.124 -0.197
153 256155_at AT3G08500 AtMYB83, myb domain protein 83, MYB83, myb domain protein 83 -0.124 0.003
154 246559_at AT5G15550 [Transducin/WD40 repeat-like superfamily protein] -0.123 0.090
155 248456_at AT5G51380 [RNI-like superfamily protein] -0.123 -0.060
156 258013_at AT3G19320 [Leucine-rich repeat (LRR) family protein] -0.122 -0.007
157 259378_at AT3G16310 1 -0.121 0.025