4.0:Information of module
Dry late day
In comparison with Leafminer damaged seedlings help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0042440 pigment metabolic process BP 1.386e-11
GO:0010224 response to UV-B BP 2.112e-10
GO:0044281 small molecule metabolic process BP 1.626e-09
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0044281 small molecule metabolic process BP 2.424e-07
GO:1901564 organonitrogen compound metabolic proces... BP 4.115e-07
GO:0006732 coenzyme metabolic process BP 2.140e-06
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
Dry late day		 Log2 signal ratio
Leafminer damaged seedlings
1 264400_at AT1G61800 ATGPT2, ARABIDOPSIS GLUCOSE-6-PHOSPHATE/PHOSPHATE TRANSLOCATOR 2, GPT2, glucose-6-phosphate/phosphate translocator 2 0.770 0.487
2 260140_at AT1G66390 ATMYB90, MYB90, myb domain protein 90, PAP2, PRODUCTION OF ANTHOCYANIN PIGMENT 2 0.696 -0.168
3 245628_at AT1G56650 ATMYB75, MYB DOMAIN PROTEIN 75, MYB75, MYELOBLASTOSIS PROTEIN 75, PAP1, production of anthocyanin pigment 1, SIAA1, SUC-INDUCED ANTHOCYANIN ACCUMULATION 1 0.528 0.749
4 245624_at AT4G14090 [UDP-Glycosyltransferase superfamily protein] 0.474 0.065
5 256924_at AT3G29590 AT5MAT 0.449 0.013
6 248185_at AT5G54060 UF3GT, UDP-glucose:flavonoid 3-o-glucosyltransferase, UGT79B1, UDP-glucosyl transferase 79B1 0.410 0.086
7 254189_at AT4G24000 ATCSLG2, ARABIDOPSIS THALIANA CELLULOSE SYNTHASE LIKE G2, CSLG2, cellulose synthase like G2 0.386 0.964
8 249215_at AT5G42800 DFR, dihydroflavonol 4-reductase, M318, TT3 0.363 0.224
9 250083_at AT5G17220 ATGSTF12, ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE PHI 12, GST26, GLUTATHIONE S-TRANSFERASE 26, GSTF12, glutathione S-transferase phi 12, TT19, TRANSPARENT TESTA 19 0.346 0.073
10 250207_at AT5G13930 ATCHS, CHS, CHALCONE SYNTHASE, TT4, TRANSPARENT TESTA 4 0.334 -0.402
11 247751_at AT5G59050 unknown 0.321 -0.032
12 265913_at AT2G25625 unknown 0.313 0.111
13 257925_at AT3G23170 unknown 0.289 0.469
14 251272_at AT3G61890 ATHB-12, homeobox 12, ATHB12, ARABIDOPSIS THALIANA HOMEOBOX 12, HB-12, homeobox 12 0.274 0.315
15 246468_at AT5G17050 UGT78D2, UDP-glucosyl transferase 78D2 0.274 -0.258
16 251644_at AT3G57540 [Remorin family protein] 0.270 0.338
17 253219_at AT4G34990 AtMYB32, myb domain protein 32, MYB32, myb domain protein 32 0.270 0.075
18 250533_at AT5G08640 ATFLS1, FLS, FLAVONOL SYNTHASE, FLS1, flavonol synthase 1 0.255 -0.745
19 251827_at AT3G55120 A11, AtCHI, CFI, CHALCONE FLAVANONE ISOMERASE, CHI, chalcone isomerase, TT5, TRANSPARENT TESTA 5 0.250 -0.213
20 266488_at AT2G47670 PMEI6, PECTIN METHYLESTERASE INHIBITOR 6 0.246 0.044
21 258962_at AT3G10570 CYP77A6, cytochrome P450, family 77, subfamily A, polypeptide 6 0.242 -0.168
22 260203_at AT1G52890 ANAC019, NAC domain containing protein 19, NAC019, NAC domain containing protein 19 0.240 1.262
23 249601_at AT5G37980 [Zinc-binding dehydrogenase family protein] 0.239 0.011
24 265359_at AT2G16720 ATMYB7, ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 7, ATY49, MYB7, myb domain protein 7 0.237 0.869
25 266617_at AT2G29670 [Tetratricopeptide repeat (TPR)-like superfamily protein] 0.234 0.250
26 256603_at AT3G28270 unknown 0.233 -0.020
27 261785_at AT1G08230 [Transmembrane amino acid transporter family protein] 0.229 0.182
28 258932_at AT3G10150 ATPAP16, PAP16, purple acid phosphatase 16 0.227 -0.461
29 260851_at AT1G21890 UMAMIT19, Usually multiple acids move in and out Transporters 19 0.226 -0.041
30 252888_at AT4G39210 APL3 0.224 -0.222
31 258362_at AT3G14280 unknown 0.220 0.383
32 254186_at AT4G24010 ATCSLG1, ARABIDOPSIS THALIANA CELLULOSE SYNTHASE LIKE G1, CSLG1, cellulose synthase like G1 0.218 0.040
33 264692_at AT1G70000 [myb-like transcription factor family protein] 0.213 -0.218
34 257876_at AT3G17130 [Plant invertase/pectin methylesterase inhibitor superfamily protein] 0.211 -0.268
35 259970_at AT1G76570 AtLHCB7, LHCB7, light-harvesting complex B7 0.210 -0.109
36 262803_at AT1G21000 [PLATZ transcription factor family protein] 0.207 0.077
37 260156_at AT1G52880 ANAC018, Arabidopsis NAC domain containing protein 18, ATNAM, NAM, NO APICAL MERISTEM, NARS2, NAC-REGULATED SEED MORPHOLOGY 2 0.207 0.144
38 255430_at AT4G03320 AtTic20-IV, translocon at the inner envelope membrane of chloroplasts 20-IV, Tic20-IV, translocon at the inner envelope membrane of chloroplasts 20-IV 0.203 0.329
39 255294_at AT4G04750 [Major facilitator superfamily protein] 0.201 -0.466
40 264580_at AT1G05340 unknown 0.200 0.981
41 262073_at AT1G59640 BPE, BIG PETAL, BPEp, BIG PETAL P, BPEub, BIG PETAL UB, ZCW32 0.196 0.193
42 251301_at AT3G61880 CYP78A9, cytochrome p450 78a9 0.196 -0.052
43 254707_at AT4G18010 5PTASE2, myo-inositol polyphosphate 5-phosphatase 2, AT5PTASE2, myo-inositol polyphosphate 5-phosphatase 2, IP5PII, INOSITOL(1,4,5)P3 5-PHOSPHATASE II 0.195 0.370
44 260357_at AT1G69260 AFP1, ABI five binding protein 0.195 0.581
45 245348_at AT4G17770 ATTPS5, trehalose phosphatase/synthase 5, TPS5, TREHALOSE -6-PHOSPHATASE SYNTHASE S5, TPS5, trehalose phosphatase/synthase 5 0.195 -0.466
46 255795_at AT2G33380 AtCLO3, Arabidopsis thaliana caleosin 3, CLO-3, caleosin 3, CLO3, caleosin 3, RD20, RESPONSIVE TO DESSICATION 20 0.194 0.398
47 260840_at AT1G29050 TBL38, TRICHOME BIREFRINGENCE-LIKE 38 0.194 0.038
48 252470_at AT3G46930 [Protein kinase superfamily protein] 0.194 0.496
49 251109_at AT5G01600 ATFER1, ARABIDOPSIS THALIANA FERRETIN 1, FER1, ferretin 1 0.193 0.217
50 254697_at AT4G17970 ALMT12, aluminum-activated, malate transporter 12, ATALMT12, QUAC1, quick-activating anion channel 1 0.189 -0.058
51 245740_at AT1G44100 AAP5, amino acid permease 5 0.189 -0.094
52 253172_at AT4G35060 HIPP25, heavy metal associated isoprenylated plant protein 25 0.189 0.444
53 249134_at AT5G43150 unknown 0.188 -0.112
54 264879_at AT1G61260 unknown 0.187 0.047
55 252269_at AT3G49580 LSU1, RESPONSE TO LOW SULFUR 1 0.186 -0.039
56 249410_at AT5G40380 CRK42, cysteine-rich RLK (RECEPTOR-like protein kinase) 42 0.186 -0.166
57 264999_at AT1G67310 [Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains] 0.185 -0.014
58 253946_at AT4G26790 [GDSL-like Lipase/Acylhydrolase superfamily protein] 0.184 -0.586
59 251739_at AT3G56170 CAN, Ca-2+ dependent nuclease, CAN1, calcium dependent nuclease 1 0.183 0.275
60 255585_at AT4G01550 ANAC069, NAC domain containing protein 69, NAC069, NAC domain containing protein 69, NTM2, NAC with Transmembrane Motif 2 0.183 0.263
61 261832_at AT1G10650 [SBP (S-ribonuclease binding protein) family protein] 0.182 -0.239
62 262164_at AT1G78070 [Transducin/WD40 repeat-like superfamily protein] 0.182 0.225
63 266480_at AT2G31130 unknown 0.180 -0.001
64 251084_at AT5G01520 AIRP2, ABA Insensitive RING Protein 2, AtAIRP2 0.177 0.081
65 251235_at AT3G62860 [alpha/beta-Hydrolases superfamily protein] 0.176 0.205
66 261957_at AT1G64660 ATMGL, methionine gamma-lyase, MGL, methionine gamma-lyase 0.173 0.336
67 265122_at AT1G62540 FMO GS-OX2, flavin-monooxygenase glucosinolate S-oxygenase 2 0.172 0.227
68 257074_at AT3G19660 unknown 0.171 0.569
69 258091_at AT3G14560 unknown 0.170 0.432
70 261056_at AT1G01360 PYL9, PYRABACTIN RESISTANCE 1-LIKE 9, RCAR1, regulatory component of ABA receptor 1 0.169 -0.153
71 250811_at AT5G05110 [Cystatin/monellin family protein] 0.169 0.192
72 249944_at AT5G22290 anac089, NAC domain containing protein 89, FSQ6, fructose-sensing quantitative trait locus 6, NAC089, NAC domain containing protein 89 0.169 0.136
73 259953_at AT1G74810 BOR5, REQUIRES HIGH BORON 5 0.165 -0.042
74 247577_at AT5G61290 [Flavin-binding monooxygenase family protein] 0.164 -0.066
75 261399_at AT1G79620 [Leucine-rich repeat protein kinase family protein] 0.163 -0.288
76 260054_at AT1G78130 UNE2, unfertilized embryo sac 2 0.163 0.157
77 250400_at AT5G10740 [Protein phosphatase 2C family protein] 0.162 0.094
78 258119_at AT3G14720 ATMPK19, ARABIDOPSIS THALIANA MAP KINASE 19, MPK19, MAP kinase 19 0.159 -0.013
79 251011_at AT5G02560 HTA12, histone H2A 12 0.159 0.006
80 263805_at AT2G40400 unknown -0.451 -0.281
81 252374_at AT3G48100 ARR5, response regulator 5, ATRR2, ARABIDOPSIS THALIANA RESPONSE REGULATOR 2, IBC6, INDUCED BY CYTOKININ 6, RR5, response regulator 5 -0.384 0.221
82 247406_at AT5G62920 ARR6, response regulator 6 -0.305 0.044
83 245504_at AT4G15660 [Thioredoxin superfamily protein] -0.277 0.668
84 261684_at AT1G47400 unknown -0.273 -0.436
85 265161_at AT1G30900 BP80-3;3, binding protein of 80 kDa 3;3, VSR3;3, VACUOLAR SORTING RECEPTOR 3;3, VSR6, VACUOLAR SORTING RECEPTOR 6 -0.243 0.136
86 245506_at AT4G15700 [Thioredoxin superfamily protein] -0.230 0.558
87 267462_at AT2G33735 [Chaperone DnaJ-domain superfamily protein] -0.224 -0.195
88 245411_at AT4G17240 unknown -0.224 0.299
89 264114_at AT2G31270 ATCDT1A, ARABIDOPSIS HOMOLOG OF YEAST CDT1 A, CDT1, ARABIDOPSIS HOMOLOG OF YEAST CDT1, CDT1A, homolog of yeast CDT1 A -0.220 -0.100
90 251538_at AT3G58660 [Ribosomal protein L1p/L10e family] -0.219 -0.072
91 246943_at AT5G25440 [Protein kinase superfamily protein] -0.217 0.419
92 264357_at AT1G03360 ATRRP4, ribosomal RNA processing 4, RRP4, ribosomal RNA processing 4 -0.208 -0.085
93 248065_at AT5G55580 [Mitochondrial transcription termination factor family protein] -0.207 -0.324
94 259632_at AT1G56430 ATNAS4, ARABIDOPSIS THALIANA NICOTIANAMINE SYNTHASE 4, NAS4, nicotianamine synthase 4 -0.207 -0.524
95 250560_at AT5G08020 ATRPA70B, ARABIDOPSIS THALIANA RPA70-KDA SUBUNIT B, RPA70B, RPA70-kDa subunit B -0.204 -0.088
96 258828_at AT3G07130 ATPAP15, PURPLE ACID PHOSPHATASE 15, PAP15, purple acid phosphatase 15 -0.199 -0.129
97 258009_at AT3G19440 [Pseudouridine synthase family protein] -0.179 0.008
98 256324_at AT1G66760 [MATE efflux family protein] -0.173 0.640
99 254284_at AT4G22910 CCS52A1, cell cycle switch protein 52 A1, FZR2, FIZZY-related 2 -0.171 -0.086
100 257100_at AT3G25010 AtRLP41, receptor like protein 41, RLP41, receptor like protein 41 -0.169 0.116
101 249637_at AT5G36900 unknown -0.167 -0.037
102 245154_at AT5G12460 unknown -0.166 -0.039
103 251271_at AT3G62050 [Putative endonuclease or glycosyl hydrolase] -0.166 -0.136
104 248295_at AT5G53070 [Ribosomal protein L9/RNase H1] -0.165 -0.073
105 263318_at AT2G24762 AtGDU4, glutamine dumper 4, GDU4, glutamine dumper 4 -0.164 -0.503
106 254660_at AT4G18250 [receptor serine/threonine kinase, putative] -0.162 0.503
107 259643_at AT1G68890 PHYLLO, PHYLLO -0.160 -0.147
108 253925_at AT4G26690 GDPDL3, Glycerophosphodiester phosphodiesterase (GDPD) like 3, GPDL2, GLYCEROPHOSPHODIESTERASE-LIKE 2, MRH5, MUTANT ROOT HAIR 5, SHV3, SHAVEN 3 -0.159 -0.033
109 248270_at AT5G53450 ORG1, OBP3-responsive gene 1 -0.157 -0.265
110 260667_at AT1G19440 KCS4, 3-ketoacyl-CoA synthase 4 -0.156 -0.145
111 250084_at AT5G17240 SDG40, SET domain group 40 -0.156 -0.112
112 256910_at AT3G24080 [KRR1 family protein] -0.155 -0.007
113 258898_at AT3G05740 RECQI1, RECQ helicase l1 -0.152 -0.077
114 249862_at AT5G22920 [CHY-type/CTCHY-type/RING-type Zinc finger protein] -0.152 -0.114
115 248841_at AT5G46740 UBP21, ubiquitin-specific protease 21 -0.151 -0.071
116 263435_at AT2G28600 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.150 0.018
117 252147_at AT3G51270 [protein serine/threonine kinases] -0.149 -0.074
118 253974_at AT4G26540 [Leucine-rich repeat receptor-like protein kinase family protein] -0.149 -0.206
119 245828_at AT1G57820 ORTH2, ORTHRUS 2, VIM1, VARIANT IN METHYLATION 1 -0.148 -0.052
120 245164_at AT2G33210 HSP60-2, heat shock protein 60-2 -0.147 -0.029
121 251593_at AT3G57660 NRPA1, nuclear RNA polymerase A1 -0.146 -0.176
122 248460_at AT5G50915 [basic helix-loop-helix (bHLH) DNA-binding superfamily protein] -0.146 -0.373
123 253973_at AT4G26555 [FKBP-like peptidyl-prolyl cis-trans isomerase family protein] -0.145 -0.225
124 252684_at AT3G44400 [Disease resistance protein (TIR-NBS-LRR class) family] -0.144 0.183
125 253207_at AT4G34770 SAUR1, SMALL AUXIN UPREGULATED RNA 1 -0.143 -0.278
126 262696_at AT1G75870 unknown -0.143 -0.048
127 251378_at AT3G60660 unknown -0.142 -0.012
128 265250_at AT2G01950 BRL2, BRI1-like 2, VH1, VASCULAR HIGHWAY 1 -0.142 -0.409
129 260970_at AT1G53640 unknown -0.142 0.012
130 248776_at AT5G47900 unknown -0.142 -0.185
131 248691_at AT5G48310 unknown -0.141 -0.030
132 248528_at AT5G50760 SAUR55, SMALL AUXIN UPREGULATED RNA 55 -0.140 0.491
133 257621_at AT3G20410 CPK9, calmodulin-domain protein kinase 9 -0.139 0.371
134 250753_at AT5G05860 UGT76C2, UDP-glucosyl transferase 76C2 -0.138 0.036
135 263594_at AT2G01880 ATPAP7, PURPLE ACID PHOSPHATASE 7, PAP7, purple acid phosphatase 7 -0.138 0.048
136 246478_at AT5G15980 [Pentatricopeptide repeat (PPR) superfamily protein] -0.137 -0.113
137 257188_at AT3G13150 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.136 0.003
138 251807_at AT3G55400 OVA1, OVULE ABORTION 1 -0.135 0.028
139 258871_at AT3G03060 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.133 -0.088
140 262657_at AT1G14210 [Ribonuclease T2 family protein] -0.132 -0.097
141 246094_at AT5G19300 unknown -0.131 -0.005
142 259703_at AT1G77790 [Glycosyl hydrolase superfamily protein] -0.131 -0.026
143 253592_at AT4G30840 [Transducin/WD40 repeat-like superfamily protein] -0.130 -0.048
144 252574_at AT3G45430 LecRK-I.5, L-type lectin receptor kinase I.5 -0.129 -0.119
145 255282_at AT4G04600 [copia-like retrotransposon family, has a 0. P-value blast match to GB:CAA31653 polyprotein (Ty1_Copia-element) (Arabidopsis thaliana)] -0.128 0.013
146 266957_at AT2G34640 HMR, HEMERA, PTAC12, plastid transcriptionally active 12, TAC12 -0.128 -0.114
147 252148_at AT3G51280 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.127 -0.035
148 261032_at AT1G17430 [alpha/beta-Hydrolases superfamily protein] -0.126 0.006
149 266489_at AT2G35190 ATNPSN11, NPSN11, novel plant snare 11, NSPN11 -0.125 -0.134
150 245614_at AT4G14460 [copia-like retrotransposon family, has a 4.2e-253 P-value blast match to GB:CAA72989 open reading frame 1 (Ty1_Copia-element) (Brassica oleracea)] -0.125 -0.018
151 251496_at AT3G59040 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.124 -0.203
152 258402_at AT3G15450 [Aluminium induced protein with YGL and LRDR motifs] -0.124 0.220
153 256155_at AT3G08500 AtMYB83, myb domain protein 83, MYB83, myb domain protein 83 -0.124 -0.036
154 246559_at AT5G15550 [Transducin/WD40 repeat-like superfamily protein] -0.123 -0.008
155 248456_at AT5G51380 [RNI-like superfamily protein] -0.123 -0.021
156 258013_at AT3G19320 [Leucine-rich repeat (LRR) family protein] -0.122 0.003
157 259378_at AT3G16310 1 -0.121 0.049