4.0:Information of module
4xX2x interploidy cross
In comparison with 20d after anthesis help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0051235 maintenance of location BP 2.423e-03
GO:0010876 lipid localization BP 2.669e-03
GO:0019915 lipid storage BP 4.435e-03
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0016126 sterol biosynthetic process BP 7.881e-04
GO:0016125 sterol metabolic process BP 1.016e-03
GO:0006270 DNA replication initiation BP 1.468e-03
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
4xX2x interploidy cross		 Log2 signal ratio
20d after anthesis
1 253894_at AT4G27150 AT2S2, SESA2, seed storage albumin 2 1.748 1.973
2 249082_at AT5G44120 ATCRA1, CRUCIFERINA, CRA1, CRUCIFERINA, CRU1 1.463 1.655
3 253707_at AT4G29200 [Beta-galactosidase related protein] 1.266 0.044
4 254095_at AT4G25140 OLE1, OLEOSIN 1, OLEO1, oleosin 1 1.215 1.112
5 262206_at AT2G01090 [Ubiquinol-cytochrome C reductase hinge protein] 1.160 0.044
6 265063_at AT1G61500 [S-locus lectin protein kinase family protein] 1.104 0.057
7 267267_at AT2G02580 CYP71B9, cytochrome P450, family 71, subfamily B, polypeptide 9 1.070 0.028
8 256073_at AT1G18100 E12A11, MFT, MOTHER OF FT AND TFL1 1.058 0.596
9 254447_at AT4G20860 [FAD-binding Berberine family protein] 1.057 0.196
10 249353_at AT5G40420 OLE2, OLEOSIN 2, OLEO2, oleosin 2 0.962 0.731
11 262431_at AT1G47540 [Scorpion toxin-like knottin superfamily protein] 0.957 0.766
12 252050_at AT3G52550 unknown 0.858 -0.253
13 265644_at AT2G27380 ATEPR1, extensin proline-rich 1, EPR1, extensin proline-rich 1 0.857 0.418
14 265754_x_at AT2G10640 [CACTA-like transposase family (Ptta/En/Spm), has a 7.4e-42 P-value blast match to At5g29026.1/8-244 CACTA-like transposase family (Ptta/En/Spm) (CACTA-element) (Arabidopsis thaliana)] 0.848 0.050
15 245554_at AT4G15380 CYP705A4, cytochrome P450, family 705, subfamily A, polypeptide 4 0.834 -0.152
16 266151_x_at AT2G12300 [CACTA-like transposase family (Ptta/En/Spm), has a 3.8e-41 P-value blast match to At5g29026.1/8-244 CACTA-like transposase family (Ptta/En/Spm) (CACTA-element) (Arabidopsis thaliana)] 0.778 0.034
17 258434_at AT3G16770 ATEBP, ethylene-responsive element binding protein, EBP, ethylene-responsive element binding protein, ERF72, ETHYLENE RESPONSE FACTOR 72, RAP2.3, RELATED TO AP2 3 0.712 0.065
18 264557_at AT1G09550 [Pectinacetylesterase family protein] 0.694 -0.287
19 258113_at AT3G14650 CYP72A11, cytochrome P450, family 72, subfamily A, polypeptide 11 0.677 0.044
20 246498_at AT5G16230 [Plant stearoyl-acyl-carrier-protein desaturase family protein] 0.630 0.213
21 256748_x_at AT3G30396 [CACTA-like transposase family (Ptta/En/Spm), has a 3.1e-39 P-value blast match to At5g29026.1/8-244 CACTA-like transposase family (Ptta/En/Spm) (CACTA-element) (Arabidopsis thaliana)] 0.623 0.019
22 266827_at AT2G22920 SCPL12, serine carboxypeptidase-like 12 0.619 -0.002
23 250063_at AT5G17880 CSA1, constitutive shade-avoidance1 0.578 0.224
24 267428_at AT2G34840 [Coatomer epsilon subunit] 0.535 0.022
25 245451_at AT4G16890 BAL, BALL, SNC1, SUPPRESSOR OF NPR1-1, CONSTITUTIVE 1 0.531 0.037
26 251293_at AT3G61930 unknown 0.529 0.252
27 262942_at AT1G79450 ALIS5, ALA-interacting subunit 5 0.516 0.269
28 252312_at AT3G49380 iqd15, IQ-domain 15 0.481 -0.068
29 251725_at AT3G56260 unknown 0.458 -0.056
30 247965_at AT5G56540 AGP14, arabinogalactan protein 14, ATAGP14 0.451 0.621
31 252976_s_at AT4G38550 [Arabidopsis phospholipase-like protein (PEARLI 4) family] 0.441 0.200
32 254928_at AT4G11410 [NAD(P)-binding Rossmann-fold superfamily protein] 0.437 0.199
33 267627_at AT2G42270 [U5 small nuclear ribonucleoprotein helicase] 0.423 -0.060
34 253411_at AT4G32980 ATH1, homeobox gene 1 0.422 0.156
35 245445_at AT4G16750 [Integrase-type DNA-binding superfamily protein] 0.418 0.217
36 264635_at AT1G65500 unknown 0.392 0.897
37 260544_at AT2G43540 unknown 0.373 0.144
38 260546_at AT2G43520 ATTI2, trypsin inhibitor protein 2, TI2, trypsin inhibitor protein 2 0.352 0.828
39 265893_at AT2G15042 [Leucine-rich repeat (LRR) family protein] 0.351 0.208
40 261813_at AT1G08280 [Glycosyltransferase family 29 (sialyltransferase) family protein] 0.344 -0.382
41 267198_at AT2G30810 [Gibberellin-regulated family protein] -1.307 -1.071
42 266723_at AT2G03190 ASK16, SKP1-like 16, SK16, SKP1-like 16 -1.257 -0.692
43 259045_at AT3G03410 [EF hand calcium-binding protein family] -1.162 -0.043
44 265698_at AT2G32160 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] -1.089 0.328
45 265588_at AT2G19970 [CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein] -1.010 -0.609
46 245305_at AT4G17215 [Pollen Ole e 1 allergen and extensin family protein] -1.000 0.069
47 263023_at AT1G23960 unknown -0.984 0.012
48 246859_at AT5G25950 unknown -0.981 -0.205
49 249479_at AT5G38960 [RmlC-like cupins superfamily protein] -0.973 -0.342
50 250804_at AT5G05030 unknown -0.935 -0.263
51 245892_at AT5G09370 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.930 -1.079
52 254310_at AT4G22430 [F-box family protein] -0.926 -0.328
53 257123_at AT3G20030 [F-box and associated interaction domains-containing protein] -0.923 -0.320
54 253217_at AT4G34970 ADF9, actin depolymerizing factor 9 -0.900 -0.355
55 254450_at AT4G21080 AtDOF4.5, DOF4.5, DNA-binding with One Finger 4.5 -0.894 -0.214
56 254307_at AT4G22400 unknown -0.869 -0.536
57 267345_at AT2G44240 unknown -0.842 0.305
58 265590_at AT2G20160 ASK17, ARABIDOPSIS SKP1-LIKE 17, MEO, MEIDOS -0.839 -0.388
59 266386_at AT2G32370 HDG3, homeodomain GLABROUS 3 -0.791 -0.579
60 258130_at AT3G24510 [Defensin-like (DEFL) family protein] -0.784 -0.645
61 264554_at AT1G09510 [NAD(P)-binding Rossmann-fold superfamily protein] -0.748 -0.425
62 263642_at AT2G04750 [Actin binding Calponin homology (CH) domain-containing protein] -0.739 -0.534
63 253839_at AT4G27890 [HSP20-like chaperones superfamily protein] -0.718 -0.247
64 249216_at AT5G42240 scpl42, serine carboxypeptidase-like 42 -0.709 -0.276
65 267408_at AT2G34890 [CTP synthase family protein] -0.705 -0.231
66 253097_at AT4G37320 CYP81D5, cytochrome P450, family 81, subfamily D, polypeptide 5 -0.690 0.004
67 245511_at AT4G15755 [Calcium-dependent lipid-binding (CaLB domain) family protein] -0.690 -0.085
68 258872_at AT3G03260 HDG8, homeodomain GLABROUS 8 -0.671 -0.354
69 265831_at AT2G14460 unknown -0.668 0.159
70 262102_at AT1G02980 ATCUL2, CUL2, cullin 2 -0.664 -0.278
71 250641_at AT5G07160 [Basic-leucine zipper (bZIP) transcription factor family protein] -0.664 -0.290
72 245962_at AT5G19700 [MATE efflux family protein] -0.658 -0.349
73 267585_s_at AT2G42090 ACT9, actin 9 -0.656 -0.142
74 263034_at AT1G24020 MLP423, MLP-like protein 423 -0.635 -0.427
75 261466_at AT1G07690 unknown -0.618 -0.343
76 249856_at AT5G22980 scpl47, serine carboxypeptidase-like 47 -0.613 -0.291
77 257859_at AT3G12955 SAUR74, SMALL AUXIN UPREGULATED RNA 74 -0.611 -0.059
78 257417_at AT1G10110 [F-box family protein] -0.592 0.136
79 247343_at AT5G63740 [RING/U-box superfamily protein] -0.569 -0.056