4.0:Information of module
2xX6x interploidy cross
In comparison with bri1-116 help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0006508 proteolysis BP 1.376e-03
GO:0043604 amide biosynthetic process BP 2.479e-03
GO:0043603 cellular amide metabolic process BP 2.588e-03
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0016569 covalent chromatin modification BP 2.085e-12
GO:0051276 chromosome organization BP 1.012e-11
GO:0007049 cell cycle BP 1.303e-11
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
2xX6x interploidy cross		 Log2 signal ratio
bri1-116
1 247799_at AT5G58840 [Subtilase family protein] 1.164 0.111
2 265517_at AT2G06090 [Plant self-incompatibility protein S1 family] 1.146 0.017
3 253463_at AT4G32105 [Beta-1,3-N-Acetylglucosaminyltransferase family protein] 1.128 0.044
4 265932_at AT2G19510 LBD8, LOB domain-containing protein 8 1.123 0.071
5 250499_at AT5G09730 ATBX3, ATBXL3, BETA-XYLOSIDASE 3, BX3, BXL3, beta-xylosidase 3, XYL3 1.105 0.029
6 258130_at AT3G24510 [Defensin-like (DEFL) family protein] 0.995 -0.031
7 249500_at AT5G39260 ATEXP21, ATEXPA21, expansin A21, ATHEXP ALPHA 1.20, EXP21, EXPANSIN 21, EXPA21, expansin A21 0.977 0.048
8 255073_at AT4G09090 [Carbohydrate-binding X8 domain superfamily protein] 0.950 0.015
9 266562_at AT2G23970 [Class I glutamine amidotransferase-like superfamily protein] 0.948 0.002
10 245754_at AT1G35183 unknown 0.936 0.046
11 257934_at AT3G25420 scpl21, serine carboxypeptidase-like 21 0.932 0.047
12 260066_at AT1G73610 [GDSL-like Lipase/Acylhydrolase superfamily protein] 0.905 0.036
13 253655_at AT4G30070 LCR59, low-molecular-weight cysteine-rich 59 0.898 -0.050
14 252500_at AT3G46860 [Serine protease inhibitor, potato inhibitor I-type family protein] 0.893 0.067
15 259453_at AT1G44090 ATGA20OX5, ARABIDOPSIS THALIANA GIBBERELLIN 20-OXIDASE 5, GA20OX5, gibberellin 20-oxidase 5 0.859 0.025
16 254489_at AT4G20800 [FAD-binding Berberine family protein] 0.838 0.118
17 263566_at AT2G15340 [glycine-rich protein] 0.822 0.004
18 247798_at AT5G58830 [Subtilisin-like serine endopeptidase family protein] 0.815 0.012
19 260299_at AT1G80330 ATGA3OX4, ARABIDOPSIS THALIANA GIBBERELLIN 3-OXIDASE 4, GA3OX4, gibberellin 3-oxidase 4 0.764 -0.047
20 255896_at AT1G17800 AtENODL22, ENODL22, early nodulin-like protein 22 0.762 0.006
21 267166_at AT2G37720 TBL15, TRICHOME BIREFRINGENCE-LIKE 15 0.740 0.083
22 258016_at AT3G19350 MPC, maternally expressed pab C-terminal 0.734 0.050
23 246624_at AT1G48910 YUC10, YUCCA 10 0.732 0.138
24 251428_at AT3G60140 BGLU30, BETA GLUCOSIDASE 30, DIN2, DARK INDUCIBLE 2, SRG2, SENESCENCE-RELATED GENE 2 0.709 -0.025
25 261752_at AT1G76290 [AMP-dependent synthetase and ligase family protein] 0.679 0.093
26 248275_at AT5G53520 ATOPT8, oligopeptide transporter 8, OPT8, oligopeptide transporter 8 0.677 -0.007
27 259346_at AT3G03910 glutamate dehydrogenase 3 0.667 -0.001
28 263649_at AT1G04380 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] -1.046 0.016
29 249549_at AT5G38180 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.893 0.063
30 250641_at AT5G07160 [Basic-leucine zipper (bZIP) transcription factor family protein] -0.737 0.055
31 251113_at AT5G01370 ACI1, ALC-interacting protein 1, TRM29, TON1 Recruiting Motif 29 -0.721 -0.083
32 267472_at AT2G02850 ARPN, plantacyanin -0.678 0.125
33 264802_at AT1G08560 ATSYP111, KN, KNOLLE, SYP111, syntaxin of plants 111 -0.674 -0.187
34 259966_at AT1G76500 AHL29, AT-hook motif nuclear-localized protein 29, SOB3, SUPPRESSOR OF PHYB-4#3 -0.627 -0.012
35 247425_at AT5G62550 unknown -0.612 -0.095
36 258233_at AT3G27785 ATMYB118, MYB118, myb domain protein 118, PGA37, PLANT GROWTH ACTIVATOR 37 -0.609 0.062
37 264377_at AT2G25060 AtENODL14, ENODL14, early nodulin-like protein 14 -0.607 -0.095
38 250241_at AT5G13600 [Phototropic-responsive NPH3 family protein] -0.601 0.005
39 263788_at AT2G24580 [FAD-dependent oxidoreductase family protein] -0.596 -0.199
40 252078_at AT3G51740 IMK2, inflorescence meristem receptor-like kinase 2 -0.585 -0.032
41 247962_at AT5G56580 ANQ1, ARABIDOPSIS NQK1, ATMKK6, ARABIDOPSIS THALIANA MAP KINASE KINASE 6, MKK6, MAP kinase kinase 6 -0.570 -0.110
42 247039_at AT5G67270 ATEB1C, MICROTUBULE END BINDING PROTEIN 1, ATEB1H1, ATEB1-HOMOLOG1, EB1C, end binding protein 1C -0.565 -0.107
43 267595_at AT2G32990 AtGH9B8, glycosyl hydrolase 9B8, GH9B8, glycosyl hydrolase 9B8 -0.556 0.089
44 252149_at AT3G51290 APSR1, Altered Phosphate Starvation Response 1 -0.554 0.134
45 246505_at AT5G16250 unknown -0.551 -0.194
46 267006_at AT2G34190 [Xanthine/uracil permease family protein] -0.500 -0.106
47 262543_at AT1G34245 EPF2, EPIDERMAL PATTERNING FACTOR 2 -0.494 -0.018
48 246970_at AT5G24900 CYP714A2, cytochrome P450, family 714, subfamily A, polypeptide 2, ELA2, EUI-like p450 A2 -0.482 0.034
49 258067_at AT3G25980 AtMAD2, MAD2, MITOTIC ARREST-DEFICIENT 2 -0.457 -0.442
50 252148_at AT3G51280 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.422 -0.040
51 246415_at AT5G17160 unknown -0.408 -0.097
52 260471_at AT1G11070 unknown -0.393 0.059
53 254964_at AT4G11080 3xHMG-box1, 3xHigh Mobility Group-box1 -0.392 0.058
54 253661_at AT4G30130 unknown -0.388 -0.008