4.0:Information of module
P.p 2.5hai
In comparison with Dark 1day hml help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0006952 defense response BP 2.401e-42
GO:0002376 immune system process BP 8.997e-39
GO:0010200 response to chitin BP 2.818e-38
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0006473 protein acetylation BP 6.707e-03
GO:0010817 regulation of hormone levels BP 7.338e-03
GO:0009926 auxin polar transport BP 1.054e-02
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
P.p 2.5hai		 Log2 signal ratio
Dark 1day hml
1 253060_at AT4G37710 [VQ motif-containing protein] 1.549 -0.175
2 261475_at AT1G14550 [Peroxidase superfamily protein] 1.344 -0.175
3 261449_at AT1G21120 IGMT2, indole glucosinolate O-methyltransferase 2 1.325 -3.432
4 258606_at AT3G02840 [ARM repeat superfamily protein] 1.320 -3.782
5 261474_at AT1G14540 PER4, peroxidase 4 1.215 -3.684
6 245082_at AT2G23270 unknown 1.199 -1.647
7 253044_at AT4G37290 unknown 1.165 -3.802
8 249896_at AT5G22530 unknown 1.145 -3.673
9 247215_at AT5G64905 PROPEP3, elicitor peptide 3 precursor 1.124 -1.854
10 262382_at AT1G72920 [Toll-Interleukin-Resistance (TIR) domain family protein] 1.116 -4.948
11 261960_at AT1G36550 [similar to retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa (japonica cultivar-group)] (GB:ABA98367.2)] 1.093 -0.175
12 245755_at AT1G35210 unknown 1.082 -4.676
13 263769_at AT2G06390 transposable element gene 1.061 -0.175
14 258947_at AT3G01830 [Calcium-binding EF-hand family protein] 1.055 -5.104
15 256499_at AT1G36640 unknown 1.038 -0.182
16 255197_x_at AT4G07450 unknown 1.037 -0.175
17 253796_at AT4G28460 unknown 1.006 -3.342
18 260394_at AT1G74080 ATMYB122, MYB DOMAIN PROTEIN 122, MYB122, myb domain protein 122 1.004 -0.175
19 260804_at AT1G78410 [VQ motif-containing protein] 0.988 -3.556
20 266010_at AT2G37430 ZAT11, zinc finger of Arabidopsis thaliana 11 0.986 -2.685
21 265260_at AT2G43000 ANAC042, NAC domain containing protein 42, JUB1, JUNGBRUNNEN 1, NAC042, NAC domain containing protein 42 0.984 -3.199
22 258364_at AT3G14225 GLIP4, GDSL-motif lipase 4 0.975 -0.175
23 261249_at AT1G05880 ARI12, ARIADNE 12, ATARI12, ARABIDOPSIS ARIADNE 12 0.974 -5.635
24 255753_at AT1G18570 AtMYB51, myb domain protein 51, BW51A, BW51B, HIG1, HIGH INDOLIC GLUCOSINOLATE 1, MYB51, myb domain protein 51 0.954 -1.053
25 244994_at ATCG01010 NDHF 0.943 0.354
26 261892_at AT1G80840 ATWRKY40, WRKY40, WRKY DNA-binding protein 40 0.933 -1.052
27 249333_at AT5G40990 GLIP1, GDSL lipase 1 0.929 -0.709
28 260399_at AT1G72520 ATLOX4, Arabidopsis thaliana lipoxygenase 4, LOX4, lipoxygenase 4 0.925 -4.081
29 245329_at AT4G14365 XBAT34, XB3 ortholog 4 in Arabidopsis thaliana 0.917 -3.305
30 263198_at AT1G53990 GLIP3, GDSL-motif lipase 3 0.907 -0.175
31 246370_at AT1G51920 unknown 0.900 -3.459
32 259428_at AT1G01560 ATMPK11, MAP kinase 11, MPK11, MAP kinase 11 0.894 -3.861
33 264866_at AT1G24140 [Matrixin family protein] 0.875 -2.906
34 245250_at AT4G17490 ATERF6, ethylene responsive element binding factor 6, ERF-6-6, ERF6, ethylene responsive element binding factor 6 0.867 -0.684
35 265725_at AT2G32030 [Acyl-CoA N-acyltransferases (NAT) superfamily protein] 0.865 -3.204
36 256306_at AT1G30370 DLAH, DAD1-like acylhydrolase 0.859 -2.972
37 245840_at AT1G58420 [Uncharacterised conserved protein UCP031279] 0.840 -4.898
38 249617_at AT5G37450 [Leucine-rich repeat protein kinase family protein] 0.835 0.777
39 254905_at AT4G11170 RMG1, Resistance Methylated Gene 1 0.830 -6.622
40 247145_at AT5G65600 LecRK-IX.2, L-type lectin receptor kinase IX.2 0.829 -1.032
41 257536_at AT3G02800 AtPFA-DSP3, PFA-DSP3, plant and fungi atypical dual-specificity phosphatase 3 0.802 0.126
42 259120_at AT3G02240 GLV4, GOLVEN 4, RGF7, root meristem growth factor 7 0.796 -0.175
43 257919_at AT3G23250 ATMYB15, MYB DOMAIN PROTEIN 15, ATY19, MYB15, myb domain protein 15 0.781 -0.687
44 245076_at AT2G23170 GH3.3 0.778 -0.223
45 253827_at AT4G28085 unknown 0.771 2.401
46 244974_at ATCG00700 PSBN, photosystem II reaction center protein N 0.761 0.791
47 251054_at AT5G01540 LecRK-VI.2, L-type lectin receptor kinase-VI.2, LECRKA4.1, lectin receptor kinase a4.1 0.760 -1.224
48 248570_at AT5G49780 [Leucine-rich repeat protein kinase family protein] 0.756 -1.596
49 263147_at AT1G53980 [Ubiquitin-like superfamily protein] 0.746 -0.709
50 250796_at AT5G05300 unknown 0.742 -4.094
51 249202_at AT5G42580 CYP705A12, cytochrome P450, family 705, subfamily A, polypeptide 12 -0.881 -0.175
52 256073_at AT1G18100 E12A11, MFT, MOTHER OF FT AND TFL1 -0.679 -0.175
53 262855_at AT1G20860 PHT1;8, phosphate transporter 1;8 -0.495 -0.175
54 248723_at AT5G47950 [HXXXD-type acyl-transferase family protein] -0.482 -0.175
55 261803_at AT1G30500 NF-YA7, nuclear factor Y, subunit A7 -0.461 2.188
56 254290_at AT4G23000 [Calcineurin-like metallo-phosphoesterase superfamily protein] -0.412 -0.720
57 247360_at AT5G63450 CYP94B1, cytochrome P450, family 94, subfamily B, polypeptide 1 -0.397 5.385
58 245445_at AT4G16750 [Integrase-type DNA-binding superfamily protein] -0.384 -1.508
59 261878_at AT1G50560 CYP705A25, cytochrome P450, family 705, subfamily A, polypeptide 25 -0.336 -0.918
60 267614_at AT2G26710 BAS1, PHYB ACTIVATION TAGGED SUPPRESSOR 1, CYP72B1, CYP734A1 -0.330 0.637
61 257899_at AT3G28345 ABCB15, ATP-binding cassette B15, MDR13, multi-drug resistance 13 -0.313 -4.293
62 264143_at AT1G79330 AMC6, ATMC5, metacaspase 5, ATMCP2b, metacaspase 2b, MC5, metacaspase 5, MCP2b, metacaspase 2b -0.307 -0.182
63 252232_at AT3G49760 AtbZIP5, basic leucine-zipper 5, bZIP5, basic leucine-zipper 5 -0.304 -0.175
64 252647_at AT3G44620 [protein tyrosine phosphatases] -0.295 -1.583
65 260547_at AT2G43550 [Scorpion toxin-like knottin superfamily protein] -0.290 0.494
66 258652_at AT3G09910 ATRAB18C, ATRABC2B, RAB GTPase homolog C2B, RABC2b, RAB GTPase homolog C2B -0.253 1.108
67 255899_at AT1G17970 [RING/U-box superfamily protein] -0.250 1.624
68 264389_at AT1G11960 [ERD (early-responsive to dehydration stress) family protein] -0.245 1.513
69 254703_at AT4G17960 unknown -0.243 -0.087
70 261139_at AT1G19700 BEL10, BEL1-like homeodomain 10, BLH10, BEL1-LIKE HOMEODOMAIN 10 -0.232 0.126
71 262399_at AT1G49500 unknown -0.230 1.865
72 258581_at AT3G04160 unknown -0.220 1.819
73 254982_at AT4G10470 unknown -0.220 -0.667
74 257487_at AT1G71850 [Ubiquitin carboxyl-terminal hydrolase family protein] -0.216 -1.417
75 263249_at AT2G31360 ADS2, 16:0delta9 desaturase 2, AtADS2 -0.215 2.359
76 257313_at AT3G26520 GAMMA-TIP2, SITIP, SALT-STRESS INDUCIBLE TONOPLAST INTRINSIC PROTEIN, TIP1;2, TIP2, tonoplast intrinsic protein 2 -0.215 1.925
77 262668_at AT1G62830 ATLSD1, ARABIDOPSIS LYSINE-SPECIFIC HISTONE DEMETHYLASE, ATSWP1, LDL1, LSD1-like 1, LSD1, LYSINE-SPECIFIC HISTONE DEMETHYLASE, SWP1 -0.215 -0.333
78 266519_at AT2G35155 [Trypsin family protein] -0.213 -0.654
79 248395_at AT5G52120 AtPP2-A14, phloem protein 2-A14, PP2-A14, phloem protein 2-A14 -0.212 3.938
80 246756_at AT5G27930 [Protein phosphatase 2C family protein] -0.210 3.734
81 259897_at AT1G71380 ATCEL3, cellulase 3, ATGH9B3, ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9B3, CEL3, cellulase 3 -0.209 -0.175
82 246076_at AT5G20280 ATSPS1F, sucrose phosphate synthase 1F, SPS1F, sucrose phosphate synthase 1F, SPSA1, sucrose-phosphate synthase A1 -0.207 1.648
83 259679_at AT1G77720 PPK1, putative protein kinase 1 -0.202 -1.213
84 250559_at AT5G08010 unknown -0.199 -0.447
85 250718_at AT5G06240 emb2735, embryo defective 2735 -0.197 0.214
86 245405_at AT4G17150 [alpha/beta-Hydrolases superfamily protein] -0.196 1.445
87 255527_at AT4G02360 unknown -0.194 2.164
88 256513_at AT1G31480 SGR2, SHOOT GRAVITROPISM 2 -0.183 1.610
89 259750_at AT1G71130 AtERF070, CRF8, cytokinin response factor 8, ERF070, ethylene response factor 70 -0.181 0.806
90 263073_at AT2G17500 [Auxin efflux carrier family protein] -0.181 0.690
91 258224_at AT3G15670 [Late embryogenesis abundant protein (LEA) family protein] -0.180 -0.175
92 261956_at AT1G64590 [NAD(P)-binding Rossmann-fold superfamily protein] -0.175 -0.175
93 254458_at AT4G21180 ATERDJ2B -0.166 -1.609
94 256156_at AT3G08510 ATPLC2, phospholipase C 2, PLC2, phospholipase C 2 -0.163 0.760
95 251056_at AT5G01770 ATRAPTOR1A, RAPTOR1A, RAPTOR2, RAPTOR2 -0.161 -1.993
96 265875_at AT2G01690 [ARM repeat superfamily protein] -0.160 0.158
97 262909_at AT1G59830 PP2A-1, protein phosphatase 2A-1 -0.160 0.933
98 257117_at AT3G20160 [Terpenoid synthases superfamily protein] -0.157 -0.175
99 251078_at AT5G01990 [Auxin efflux carrier family protein] -0.156 0.703