4.0:Information of module
arr10 arr12 tZ
In comparison with WT 6H Cold help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0000041 transition metal ion transport BP 3.097e-06
GO:0006811 ion transport BP 1.109e-05
GO:0006820 anion transport BP 5.272e-05
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0046283 anthocyanin-containing compound metaboli... BP 1.300e-07
GO:0044699 single-organism process BP 7.913e-06
GO:0010114 response to red light BP 1.319e-05
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
arr10 arr12 tZ		 Log2 signal ratio
WT 6H Cold
1 254550_at AT4G19690 ATIRT1, ARABIDOPSIS IRON-REGULATED TRANSPORTER 1, IRT1, iron-regulated transporter 1 0.510 -0.040
2 254819_at AT4G12500 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] 0.399 0.005
3 261684_at AT1G47400 unknown 0.322 -0.279
4 245532_at AT4G15110 CYP97B3, cytochrome P450, family 97, subfamily B, polypeptide 3 0.248 -0.001
5 257899_at AT3G28345 ABCB15, ATP-binding cassette B15, MDR13, multi-drug resistance 13 0.223 -0.062
6 255576_at AT4G01440 UMAMIT31, Usually multiple acids move in and out Transporters 31 0.214 0.001
7 255127_at AT4G08300 UMAMIT17, Usually multiple acids move in and out Transporters 17 0.201 -0.027
8 253527_at AT4G31470 [CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein] 0.191 0.012
9 248130_at AT5G54790 unknown 0.186 -0.041
10 249136_at AT5G43180 unknown 0.185 0.038
11 253822_at AT4G28410 RSA1, Root System Architecture 1 0.183 -0.035
12 266967_at AT2G39530 [Uncharacterised protein family (UPF0497)] 0.172 -0.079
13 266611_at AT2G14960 GH3.1 0.170 0.074
14 247549_at AT5G61420 AtMYB28, HAG1, HIGH ALIPHATIC GLUCOSINOLATE 1, MYB28, myb domain protein 28, PMG1, PRODUCTION OF METHIONINE-DERIVED GLUCOSINOLATE 1 0.167 -0.071
15 246142_at AT5G19970 unknown 0.159 -0.099
16 263046_at AT2G05380 GRP3S, glycine-rich protein 3 short isoform 0.159 0.010
17 266640_at AT2G35585 unknown 0.153 -0.039
18 245553_at AT4G15370 BARS1, baruol synthase 1, PEN2, PENTACYCLIC TRITERPENE SYNTHASE 2 0.150 0.044
19 257140_at AT3G28910 ATMYB30, MYB30, myb domain protein 30 0.143 0.169
20 256137_at AT1G48690 [Auxin-responsive GH3 family protein] 0.142 -0.069
21 266276_at AT2G29330 TRI, tropinone reductase 0.138 -0.080
22 254756_at AT4G13235 EDA21, embryo sac development arrest 21 0.134 -0.048
23 266209_at AT2G27550 ATC, centroradialis 0.131 -0.002
24 255028_at AT4G09890 unknown 0.130 -0.051
25 264640_at AT1G65680 ATEXPB2, expansin B2, ATHEXP BETA 1.4, EXPB2, expansin B2 0.129 0.042
26 256548_at AT3G14770 AtSWEET2, SWEET2 0.125 0.164
27 264773_at AT1G22900 [Disease resistance-responsive (dirigent-like protein) family protein] 0.124 -0.062
28 260903_at AT1G02460 [Pectin lyase-like superfamily protein] 0.123 0.001
29 245560_at AT4G15480 UGT84A1 0.121 0.190
30 247476_at AT5G62330 unknown 0.119 -0.001
31 254522_at AT4G19980 unknown 0.118 0.007
32 250747_at AT5G05900 [UDP-Glycosyltransferase superfamily protein] 0.118 -0.007
33 256789_at AT3G13672 SINA2 0.117 -0.145
34 266525_at AT2G16970 MEE15, maternal effect embryo arrest 15 0.117 -0.010
35 264022_at AT2G21185 unknown 0.116 -0.087
36 251811_at AT3G54990 SMZ, SCHLAFMUTZE 0.116 0.108
37 255575_at AT4G01430 UMAMIT29, Usually multiple acids move in and out Transporters 29 0.116 -0.144
38 267304_at AT2G30080 ATZIP6, ZIP6 0.111 -0.002
39 260276_at AT1G80450 [VQ motif-containing protein] 0.110 0.143
40 264902_at AT1G23060 MDP40, MICROTUBULE DESTABILIZING PROTEIN 40 0.106 -0.159
41 250051_at AT5G17800 AtMYB56, myb domain protein 56, MYB56, myb domain protein 56 0.106 -0.035
42 252045_at AT3G52450 AtPUB22, PUB22, plant U-box 22 0.104 0.097
43 253911_at AT4G27300 [S-locus lectin protein kinase family protein] 0.104 -0.020
44 266123_at AT2G45180 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] 0.104 -0.004
45 264374_at AT2G25180 ARR12, response regulator 12, RR12, response regulator 12 -1.004 -0.026
46 253500_at AT4G31920 ARR10, response regulator 10, RR10, response regulator 10 -0.978 -0.099
47 266078_at AT2G40670 ARR16, response regulator 16, RR16, response regulator 16 -0.890 -0.139
48 249215_at AT5G42800 DFR, dihydroflavonol 4-reductase, M318, TT3 -0.684 0.007
49 264470_at AT1G67110 CYP735A2, cytochrome P450, family 735, subfamily A, polypeptide 2 -0.548 0.027
50 250083_at AT5G17220 ATGSTF12, ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE PHI 12, GST26, GLUTATHIONE S-TRANSFERASE 26, GSTF12, glutathione S-transferase phi 12, TT19, TRANSPARENT TESTA 19 -0.546 0.104
51 248185_at AT5G54060 UF3GT, UDP-glucose:flavonoid 3-o-glucosyltransferase, UGT79B1, UDP-glucosyl transferase 79B1 -0.508 0.076
52 245624_at AT4G14090 [UDP-Glycosyltransferase superfamily protein] -0.490 0.056
53 251770_at AT3G55970 ATJRG21, JRG21, jasmonate-regulated gene 21 -0.471 -0.102
54 251335_at AT3G61400 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] -0.459 -0.004
55 250798_at AT5G05340 PRX52, peroxidase 52 -0.425 0.032
56 267497_at AT2G30540 [Thioredoxin superfamily protein] -0.412 -0.069
57 246389_at AT1G77380 AAP3, amino acid permease 3, ATAAP3 -0.341 0.029
58 262325_at AT1G64160 AtDIR5, DIR5, dirigent protein 5 -0.337 0.059
59 254213_at AT4G23590 [Tyrosine transaminase family protein] -0.309 -0.013
60 259640_at AT1G52400 ATBG1, A. THALIANA BETA-GLUCOSIDASE 1, BGL1, BETA-GLUCOSIDASE HOMOLOG 1, BGLU18, beta glucosidase 18 -0.304 -0.025
61 260541_at AT2G43530 [Scorpion toxin-like knottin superfamily protein] -0.266 -0.016
62 250646_at AT5G06720 ATPA2, peroxidase 2, AtPRX53, PA2, peroxidase 2, PRX53, peroxidase 53 -0.247 0.003
63 249932_at AT5G22390 unknown -0.223 0.025
64 262564_at AT1G34330 [pseudogene] -0.221 0.039
65 249775_at AT5G24160 SQE6, squalene monoxygenase 6 -0.205 -0.044
66 259730_at AT1G77660 [Histone H3 K4-specific methyltransferase SET7/9 family protein] -0.176 0.002
67 254328_at AT4G22570 APT3, adenine phosphoribosyl transferase 3 -0.168 -0.030
68 251243_at AT3G61870 unknown -0.166 -0.024
69 250054_at AT5G17860 CAX7, calcium exchanger 7 -0.164 0.030
70 265722_at AT2G40100 LHCB4.3, light harvesting complex photosystem II -0.163 -0.013
71 264157_at AT1G65310 ATXTH17, XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 17, XTH17, xyloglucan endotransglucosylase/hydrolase 17 -0.155 0.046
72 247914_at AT5G57540 AtXTH13, XTH13, xyloglucan endotransglucosylase/hydrolase 13 -0.151 -0.096
73 245710_at AT5G04330 CYP84A4, CYTOCHROME P450 84A4 -0.150 -0.049
74 249756_at AT5G24313 unknown -0.148 -0.022
75 266908_at AT2G34650 ABR, ABRUPTUS, PID, PINOID -0.143 0.246
76 259609_at AT1G52410 AtTSA1, TSA1, TSK-associating protein 1 -0.131 -0.072
77 249566_at AT5G38450 CYP735A1, cytochrome P450, family 735, subfamily A, polypeptide 1 -0.130 0.045
78 256697_at AT3G20660 AtOCT4, organic cation/carnitine transporter4, OCT4, organic cation/carnitine transporter4 -0.129 -0.053
79 256128_at AT1G18140 ATLAC1, LAC1, laccase 1 -0.127 -0.013
80 246803_at AT5G26980 ATSYP41, ATTLG2A, SYP41, syntaxin of plants 41 -0.126 -0.160
81 248431_at AT5G51470 [Auxin-responsive GH3 family protein] -0.123 0.076
82 246510_at AT5G15410 ATCNGC2, CYCLIC NUCLEOTIDE-GATED CHANNEL 2, CNGC2, CYCLIC NUCLEOTIDE GATED CHANNEL 2, DND1, DEFENSE NO DEATH 1 -0.121 -0.099
83 265122_at AT1G62540 FMO GS-OX2, flavin-monooxygenase glucosinolate S-oxygenase 2 -0.117 -0.022
84 263676_at AT1G09340 CRB, chloroplast RNA binding, CSP41B, CHLOROPLAST STEM-LOOP BINDING PROTEIN OF 41 KDA, HIP1.3, heteroglycan-interacting protein 1.3 -0.114 -0.014
85 264580_at AT1G05340 unknown -0.111 0.172
86 253874_at AT4G27450 [Aluminium induced protein with YGL and LRDR motifs] -0.110 -0.061
87 249467_at AT5G39610 ANAC092, Arabidopsis NAC domain containing protein 92, ATNAC2, NAC domain containing protein 2, ATNAC6, NAC domain containing protein 6, NAC2, NAC domain containing protein 2, NAC6, NAC domain containing protein 6, ORE1, ORESARA 1 -0.110 -0.214