4.0:Information of module
clf-28
In comparison with Shoot dark control 7h help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0019748 secondary metabolic process BP 1.066e-03
GO:0048827 phyllome development BP 2.415e-03
GO:0010048 vernalization response BP 3.952e-03
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0009657 plastid organization BP 7.840e-04
GO:0019637 organophosphate metabolic process BP 1.218e-03
GO:0019682 glyceraldehyde-3-phosphate metabolic pro... BP 1.259e-03
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
clf-28		 Log2 signal ratio
Shoot dark control 7h
1 254595_at AT4G18960 AG, AGAMOUS 1.225 -0.039
2 248496_at AT5G50790 AtSWEET10, SWEET10 0.857 0.024
3 264514_at AT1G09500 [NAD(P)-binding Rossmann-fold superfamily protein] 0.833 0.204
4 246279_at AT4G36740 ATHB40, homeobox protein 40, HB-5, HB40, homeobox protein 40 0.717 0.013
5 256109_at AT1G16950 unknown 0.670 0.004
6 247666_at AT5G60140 [AP2/B3-like transcriptional factor family protein] 0.661 0.069
7 246978_at AT5G24910 CYP714A1, cytochrome P450, family 714, subfamily A, polypeptide 1, ELA1, EUI-like p450 A1 0.658 -0.014
8 262047_at AT1G80160 GLYI7, glyoxylase I 7 0.654 1.474
9 264830_at AT1G03710 [Cystatin/monellin superfamily protein] 0.646 -0.015
10 249497_at AT5G39220 [alpha/beta-Hydrolases superfamily protein] 0.640 -0.234
11 264433_at AT1G61810 BGLU45, beta-glucosidase 45 0.506 0.474
12 267129_at AT2G23380 CLF, CURLY LEAF, ICU1, INCURVATA 1, SDG1, SETDOMAIN GROUP 1, SET1, SETDOMAIN 1 0.490 -0.008
13 256597_at AT3G28500 [60S acidic ribosomal protein family] 0.426 -0.034
14 263988_at AT2G42830 AGL5, AGAMOUS-like 5, SHP2, SHATTERPROOF 2 0.396 -0.085
15 245204_at AT5G12270 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] 0.372 0.089
16 249939_at AT5G22430 [Pollen Ole e 1 allergen and extensin family protein] 0.370 -0.093
17 264346_at AT1G12010 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] 0.348 0.426
18 248015_at AT5G56370 [F-box/RNI-like/FBD-like domains-containing protein] 0.320 0.185
19 263258_at AT1G10540 ATNAT8, NAT8, nucleobase-ascorbate transporter 8 0.318 -0.048
20 260433_at AT1G68170 UMAMIT23, Usually multiple acids move in and out Transporters 23 0.308 0.023
21 255768_at AT1G16705 [p300/CBP acetyltransferase-related protein-related] 0.297 -0.070
22 264041_at AT2G03710 AGL3, AGAMOUS-like 3, SEP4, SEPALLATA 4 0.274 -0.012
23 247224_at AT5G65080 AGL68, AGAMOUS-like 68, MAF5, MADS AFFECTING FLOWERING 5 0.273 0.081
24 260841_at AT1G29195 unknown 0.261 0.042
25 252896_at AT4G39480 CYP96A9, cytochrome P450, family 96, subfamily A, polypeptide 9 0.245 0.023
26 260408_at AT1G69880 ATH8, thioredoxin H-type 8, TH8, thioredoxin H-type 8 0.243 -0.039
27 251197_at AT3G62960 [Thioredoxin superfamily protein] 0.228 0.135
28 264763_at AT1G61450 unknown 0.224 -0.119
29 267035_at AT2G38400 AGT3, alanine:glyoxylate aminotransferase 3 0.224 0.768
30 260914_at AT1G02640 ATBXL2, BETA-XYLOSIDASE 2, BXL2, beta-xylosidase 2 0.215 0.665
31 259424_at AT1G13830 [Carbohydrate-binding X8 domain superfamily protein] 0.193 -0.013
32 248467_at AT5G50800 AtSWEET13, SWEET13 -0.418 -0.653
33 255621_at AT4G01390 [TRAF-like family protein] -0.418 -0.126
34 256940_at AT3G30720 QQS, QUA-QUINE STARCH -0.366 0.368
35 261431_at AT1G18710 AtMYB47, myb domain protein 47, MYB47, myb domain protein 47 -0.307 -0.510
36 257035_at AT3G19270 CYP707A4, cytochrome P450, family 707, subfamily A, polypeptide 4 -0.265 -0.108
37 267535_at AT2G41940 ZFP8, zinc finger protein 8 -0.260 0.060
38 266098_at AT2G37870 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.247 0.053
39 251746_at AT3G56060 [Glucose-methanol-choline (GMC) oxidoreductase family protein] -0.226 0.017
40 252076_at AT3G51660 [Tautomerase/MIF superfamily protein] -0.223 0.281
41 250561_at AT5G08030 AtGDPD6, GDPD6, glycerophosphodiester phosphodiesterase 6 -0.210 -0.475
42 250980_at AT5G03130 unknown -0.195 -0.141
43 257017_at AT3G19620 [Glycosyl hydrolase family protein] -0.194 -0.164
44 255907_at AT1G17920 HDG12, homeodomain GLABROUS 12 -0.179 0.026
45 255766_at AT1G16750 unknown -0.173 -0.136
46 266623_at AT2G35390 [Phosphoribosyltransferase family protein] -0.170 -0.110
47 254300_at AT4G22780 ACR7, ACT domain repeat 7 -0.167 0.436
48 247041_at AT5G67180 TOE3, target of early activation tagged (EAT) 3 -0.157 -0.244
49 264057_at AT2G28550 RAP2.7, related to AP2.7, TOE1, TARGET OF EARLY ACTIVATION TAGGED (EAT) 1 -0.147 -0.403
50 253971_at AT4G26530 AtFBA5, FBA5, fructose-bisphosphate aldolase 5 -0.142 -0.417
51 265029_at AT1G24625 ZFP7, zinc finger protein 7 -0.135 -0.209
52 254185_at AT4G23990 ATCSLG3, ARABIDOPSIS THALIANA CELLULOSE SYNTHASE-LIKE G3, CSLG3, cellulose synthase like G3 -0.133 -0.549
53 246429_at AT5G17450 HIPP21, heavy metal associated isoprenylated plant protein 21 -0.127 -0.242
54 251826_at AT3G55110 ABCG18, ATP-binding cassette G18 -0.127 -0.541
55 251601_at AT3G57800 [basic helix-loop-helix (bHLH) DNA-binding superfamily protein] -0.126 0.364
56 265985_at AT2G24220 ATPUP5, purine permease 5, PUP5, purine permease 5 -0.123 -0.097
57 257612_at AT3G26600 ARO4, armadillo repeat only 4 -0.122 0.035
58 248942_at AT5G45480 unknown -0.120 -0.043
59 255295_at AT4G04760 [Major facilitator superfamily protein] -0.118 -0.165
60 263773_at AT2G21370 XK-1, xylulose kinase-1, XK1, XYLULOSE KINASE 1 -0.117 -0.523
61 255115_at AT4G08840 APUM11, pumilio 11, PUM11, pumilio 11 -0.116 -0.007