4.0:Information of module
HAP5-triple-mutant
In comparison with CCA1-ox 6am non-polysomal help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0080167 response to karrikin BP 2.432e-05
GO:0010264 myo-inositol hexakisphosphate biosynthet... BP 2.813e-05
GO:0032958 inositol phosphate biosynthetic process BP 2.813e-05
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0006412 translation BP 9.034e-20
GO:0001510 RNA methylation BP 2.586e-17
GO:0042254 ribosome biogenesis BP 1.321e-14
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
HAP5-triple-mutant		 Log2 signal ratio
CCA1-ox 6am non-polysomal
1 245712_at AT5G04360 ATLDA, limit dextrinase, ATPU1, PULLULANASE 1, LDA, limit dextrinase, PU1, PULLULANASE 1 0.304 -0.037
2 256442_at AT3G10930 unknown 0.234 -0.041
3 253859_at AT4G27657 unknown 0.196 -0.150
4 248794_at AT5G47220 ATERF-2, ETHYLENE RESPONSE FACTOR- 2, ATERF2, ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 2, ERF2, ethylene responsive element binding factor 2 0.196 0.286
5 259001_at AT3G01960 unknown 0.173 -0.093
6 259850_at AT1G72240 unknown 0.169 -0.013
7 261684_at AT1G47400 unknown 0.165 -0.201
8 256940_at AT3G30720 QQS, QUA-QUINE STARCH 0.161 -0.031
9 251952_at AT3G53650 [Histone superfamily protein] 0.161 -0.061
10 263433_at AT2G22240 ATIPS2, INOSITOL 3-PHOSPHATE SYNTHASE 2, ATMIPS2, MYO-INOSITOL-1-PHOSTPATE SYNTHASE 2, MIPS2, myo-inositol-1-phosphate synthase 2 0.154 0.067
11 256751_at AT3G27170 ATCLC-B, CLC-B, chloride channel B 0.152 0.017
12 258321_at AT3G22840 ELIP, ELIP1, EARLY LIGHT-INDUCABLE PROTEIN 0.141 0.183
13 255535_at AT4G01790 [Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein] 0.140 0.033
14 264342_at AT1G12080 [Vacuolar calcium-binding protein-related] 0.139 0.034
15 267077_at AT2G40970 MYBC1 0.132 -0.086
16 248964_at AT5G45340 CYP707A3, cytochrome P450, family 707, subfamily A, polypeptide 3 0.131 -0.319
17 253332_at AT4G33420 [Peroxidase superfamily protein] 0.127 -0.058
18 245306_at AT4G14690 ELIP2, EARLY LIGHT-INDUCIBLE PROTEIN 2 0.124 -0.104
19 259526_at AT1G12570 [Glucose-methanol-choline (GMC) oxidoreductase family protein] 0.121 0.193
20 247035_at AT5G67110 ALC, ALCATRAZ 0.121 0.116
21 250764_at AT5G05960 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] 0.121 0.096
22 256569_at AT3G19550 unknown 0.120 -0.125
23 251991_at AT3G53340 NF-YB10, nuclear factor Y, subunit B10 0.119 -0.042
24 267141_at AT2G38090 [Duplicated homeodomain-like superfamily protein] 0.115 0.014
25 253494_at AT4G31830 unknown 0.115 -0.117
26 250335_at AT5G11650 [alpha/beta-Hydrolases superfamily protein] 0.114 0.038
27 263985_at AT2G42750 DJC77, DNA J protein C77 0.114 -0.059
28 250277_at AT5G12940 [Leucine-rich repeat (LRR) family protein] 0.112 -0.057
29 267595_at AT2G32990 AtGH9B8, glycosyl hydrolase 9B8, GH9B8, glycosyl hydrolase 9B8 0.111 -0.055
30 264289_at AT1G61890 [MATE efflux family protein] 0.110 0.249
31 266320_at AT2G46640 TAC1, Tiller Angle Control 1 0.110 0.008
32 257625_at AT3G26230 CYP71B24, cytochrome P450, family 71, subfamily B, polypeptide 24 0.110 -0.017
33 266626_at AT2G35360 [ubiquitin family protein] 0.104 -0.091
34 257642_at AT3G25710 ATAIG1, BHLH32, basic helix-loop-helix 32, TMO5, TARGET OF MONOPTEROS 5 0.102 0.144
35 249326_at AT5G40840 AtRAD21.1, Sister chromatid cohesion 1 (SCC1) protein homolog 2, SYN2 0.102 -0.075
36 261576_at AT1G01070 UMAMIT28, Usually multiple acids move in and out Transporters 28 0.101 0.433
37 249728_at AT5G24390 [Ypt/Rab-GAP domain of gyp1p superfamily protein] 0.100 0.012
38 249769_at AT5G24120 ATSIG5, SIGMA FACTOR 5, SIG5, SIGMA FACTOR 5, SIGE, sigma factor E 0.095 -0.000
39 264800_at AT1G08800 MyoB1, myosin binding protein 1 0.093 -0.144
40 265214_at AT1G05000 AtPFA-DSP1, PFA-DSP1, plant and fungi atypical dual-specificity phosphatase 1 0.092 0.078
41 248686_at AT5G48540 [receptor-like protein kinase-related family protein] 0.091 -0.029
42 247707_at AT5G59450 [GRAS family transcription factor] 0.090 0.021
43 259572_at AT1G20400 unknown 0.090 0.036
44 264190_at AT1G54830 NF-YC3, nuclear factor Y, subunit C3 -0.762 0.195
45 249645_at AT5G36910 THI2.2, thionin 2.2 -0.266 -0.112
46 264650_at AT1G08970 HAP5C, HEME ACTIVATED PROTEIN 5C, NF-YC9, nuclear factor Y, subunit C9 -0.249 0.000
47 248021_at AT5G56500 Cpn60beta3, chaperonin-60beta3 -0.216 -0.125
48 261942_at AT1G22590 AGL87, AGAMOUS-like 87 -0.196 0.537
49 266566_at AT2G24040 [Low temperature and salt responsive protein family] -0.195 0.109
50 251223_at AT3G62610 ATMYB11, myb domain protein 11, MYB11, myb domain protein 11, PFG2, PRODUCTION OF FLAVONOL GLYCOSIDES 2 -0.193 0.029
51 266383_at AT2G14580 ATPRB1, basic pathogenesis-related protein 1, PRB1, basic pathogenesis-related protein 1 -0.189 -0.081
52 249955_at AT5G18840 [Major facilitator superfamily protein] -0.177 0.179
53 251358_at AT3G61160 [Protein kinase superfamily protein] -0.160 0.027
54 256096_at AT1G13650 unknown -0.157 0.043
55 258923_at AT3G10450 SCPL7, serine carboxypeptidase-like 7 -0.153 0.020
56 267349_at AT2G40010 [Ribosomal protein L10 family protein] -0.152 -0.076
57 245000_at ATCG00210 YCF6 -0.151 0.098
58 259527_at AT1G12600 [UDP-N-acetylglucosamine (UAA) transporter family] -0.149 0.017
59 262031_x_at AT1G37160 [gypsy-like retrotransposon family (Athila), similar to putative Athila retroelement ORF1 protein GI:4567296 from (Arabidopsis thaliana)] -0.148 0.112
60 253796_at AT4G28460 unknown -0.146 0.056
61 244942_at ATMG00050 ORF131 -0.143 -0.250
62 264514_at AT1G09500 [NAD(P)-binding Rossmann-fold superfamily protein] -0.143 -0.017
63 261619_x_at AT1G33130 [CACTA-like transposase family (Ptta/En/Spm), has a 1.3e-125 P-value blast match to At5g36655.1/81-333 CACTA-like transposase family (Ptta/En/Spm) (CACTA-element) (Arabidopsis thaliana)] -0.141 0.059
64 246963_at AT5G24820 [Eukaryotic aspartyl protease family protein] -0.137 0.025
65 245008_at ATCG00360 YCF3 -0.136 0.143
66 253720_at AT4G29270 [HAD superfamily, subfamily IIIB acid phosphatase ] -0.136 -0.132
67 266385_at AT2G14610 ATPR1, PATHOGENESIS-RELATED GENE 1, PR 1, PATHOGENESIS-RELATED GENE 1, PR1, pathogenesis-related gene 1 -0.135 -0.073
68 254130_at AT4G24540 AGL24, AGAMOUS-like 24 -0.129 0.004
69 257129_at AT3G20100 CYP705A19, cytochrome P450, family 705, subfamily A, polypeptide 19 -0.129 0.075
70 261046_at AT1G01390 [UDP-Glycosyltransferase superfamily protein] -0.129 0.086
71 257185_at AT3G13100 ABCC7, ATP-binding cassette C7, ATMRP7, multidrug resistance-associated protein 7, MRP7, MRP7, multidrug resistance-associated protein 7 -0.126 0.018
72 245251_at AT4G17615 ATCBL1, ARABIDOPSIS THALIANA CALCINEURIN B-LIKE PROTEIN, CBL1, calcineurin B-like protein 1, SCABP5, SOS3-LIKE CALCIUM BINDING PROTEIN 5 -0.123 0.096
73 263281_at AT2G14160 [RNA-binding (RRM/RBD/RNP motifs) family protein] -0.120 0.248
74 265128_at AT1G30860 [RING/U-box superfamily protein] -0.117 -0.028
75 264513_at AT1G09420 G6PD4, glucose-6-phosphate dehydrogenase 4 -0.116 0.075
76 260186_at AT1G36020 unknown -0.115 -0.154
77 265022_at AT1G24520 BCP1, homolog of Brassica campestris pollen protein 1 -0.112 0.248
78 262807_at AT1G11740 [ankyrin repeat family protein] -0.112 -0.355
79 261735_at AT1G47765 [F-box and associated interaction domains-containing protein] -0.111 -0.034
80 248484_at AT5G51030 [NAD(P)-binding Rossmann-fold superfamily protein] -0.110 0.024
81 255391_at AT4G03670 unknown -0.110 0.281
82 256099_at AT1G13710 CYP78A5, cytochrome P450, family 78, subfamily A, polypeptide 5, KLU, KLUH -0.109 -0.100
83 247666_at AT5G60140 [AP2/B3-like transcriptional factor family protein] -0.109 -0.065
84 252004_at AT3G52780 ATPAP20, PAP20 -0.107 -0.037
85 262386_at AT1G49370 [pseudogene] -0.104 -0.012