4.0:Information of module
Ler KAR1 24h seed
In comparison with abi4-102 (I) help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0080167 response to karrikin BP 7.954e-46
GO:0009628 response to abiotic stimulus BP 8.814e-11
GO:0050896 response to stimulus BP 2.316e-05
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0080167 response to karrikin BP 6.138e-07
GO:0009414 response to water deprivation BP 4.099e-03
GO:0009415 response to water BP 4.658e-03
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
Ler KAR1 24h seed		 Log2 signal ratio
abi4-102 (I)
1 262552_at AT1G31350 KUF1, KAR-UP F-box 1 0.476 -0.001
2 252924_at AT4G39070 BBX20, B-box domain protein 20, BZS1, BZS1 0.314 0.018
3 245768_at AT1G33590 [Leucine-rich repeat (LRR) family protein] 0.256 0.108
4 255659_at AT4G00895 [ATPase, F1 complex, OSCP/delta subunit protein] 0.252 -0.009
5 251402_at AT3G60290 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] 0.238 0.029
6 245726_at AT1G73360 AtEDT1, ATHDG11, HOMEODOMAIN GLABROUS 11, EDT1, ENHANCED DROUGHT TOLERANCE 1, HDG11, homeodomain GLABROUS 11 0.230 -0.059
7 260140_at AT1G66390 ATMYB90, MYB90, myb domain protein 90, PAP2, PRODUCTION OF ANTHOCYANIN PIGMENT 2 0.222 -0.012
8 263608_at AT2G16260 GR-RBP1, glycine-rich RNA-binding protein 1 0.221 -0.040
9 252661_at AT3G44450 unknown 0.208 -0.002
10 265414_at AT2G16660 [Major facilitator superfamily protein] 0.184 0.086
11 257340_at AT2G10760 [copia-like retrotransposon family, has a 6.5e-285 P-value blast match to GB:CAA31653 polyprotein (Ty1_Copia-element) (Arabidopsis thaliana)] 0.166 -0.029
12 247824_at AT5G58460 ATCHX25, ARABIDOPSIS THALIANA CATION/H+ EXCHANGER 25, CHX25, cation/H+ exchanger 25 0.166 -0.066
13 259132_at AT3G02250 [O-fucosyltransferase family protein] -0.164 -0.052
14 248801_at AT5G47370 HAT2 -0.161 -0.089
15 255900_at AT1G17830 unknown -0.156 -0.089
16 265648_at AT2G27500 [Glycosyl hydrolase superfamily protein] -0.153 -0.101
17 253615_at AT4G30360 ATCNGC17, CYCLIC NUCLEOTIDE-GATED CHANNEL 17, CNGC17, cyclic nucleotide-gated channel 17 -0.145 0.029
18 253828_at AT4G27970 SLAH2, SLAC1 homologue 2 -0.144 -0.038
19 253373_at AT4G33150 LKR, LKR/SDH, LYSINE-KETOGLUTARATE REDUCTASE/SACCHAROPINE DEHYDROGENASE, SDH, SACCHAROPINE DEHYDROGENASE -0.141 -0.123
20 265506_at AT2G15540 [non-LTR retrotransposon family (LINE), has a 2.7e-33 P-value blast match to GB:NP_038607 L1 repeat, Tf subfamily, member 9 (LINE-element) (Mus musculus)] -0.138 -0.005
21 247230_at AT5G65170 [VQ motif-containing protein] -0.130 -0.026
22 267147_at AT2G38240 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] -0.104 -0.049
23 261059_at AT1G01250 [Integrase-type DNA-binding superfamily protein] -0.102 -0.148