4.0:Information of module
Ler KAR1 24h seed
In comparison with seed germinating in countinuous light 24h SL help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0080167 response to karrikin BP 7.954e-46
GO:0009628 response to abiotic stimulus BP 8.814e-11
GO:0050896 response to stimulus BP 2.316e-05
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0080167 response to karrikin BP 6.138e-07
GO:0009414 response to water deprivation BP 4.099e-03
GO:0009415 response to water BP 4.658e-03
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
Ler KAR1 24h seed		 Log2 signal ratio
seed germinating in countinuous light 24h SL
1 262552_at AT1G31350 KUF1, KAR-UP F-box 1 0.476 -1.049
2 252924_at AT4G39070 BBX20, B-box domain protein 20, BZS1, BZS1 0.314 0.860
3 245768_at AT1G33590 [Leucine-rich repeat (LRR) family protein] 0.256 0.716
4 255659_at AT4G00895 [ATPase, F1 complex, OSCP/delta subunit protein] 0.252 0.745
5 251402_at AT3G60290 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] 0.238 -0.761
6 245726_at AT1G73360 AtEDT1, ATHDG11, HOMEODOMAIN GLABROUS 11, EDT1, ENHANCED DROUGHT TOLERANCE 1, HDG11, homeodomain GLABROUS 11 0.230 -0.673
7 260140_at AT1G66390 ATMYB90, MYB90, myb domain protein 90, PAP2, PRODUCTION OF ANTHOCYANIN PIGMENT 2 0.222 -0.138
8 263608_at AT2G16260 GR-RBP1, glycine-rich RNA-binding protein 1 0.221 -0.578
9 252661_at AT3G44450 unknown 0.208 1.058
10 265414_at AT2G16660 [Major facilitator superfamily protein] 0.184 0.534
11 257340_at AT2G10760 [copia-like retrotransposon family, has a 6.5e-285 P-value blast match to GB:CAA31653 polyprotein (Ty1_Copia-element) (Arabidopsis thaliana)] 0.166 -0.678
12 247824_at AT5G58460 ATCHX25, ARABIDOPSIS THALIANA CATION/H+ EXCHANGER 25, CHX25, cation/H+ exchanger 25 0.166 -0.674
13 259132_at AT3G02250 [O-fucosyltransferase family protein] -0.164 -0.347
14 248801_at AT5G47370 HAT2 -0.161 -0.051
15 255900_at AT1G17830 unknown -0.156 0.432
16 265648_at AT2G27500 [Glycosyl hydrolase superfamily protein] -0.153 0.633
17 253615_at AT4G30360 ATCNGC17, CYCLIC NUCLEOTIDE-GATED CHANNEL 17, CNGC17, cyclic nucleotide-gated channel 17 -0.145 0.240
18 253828_at AT4G27970 SLAH2, SLAC1 homologue 2 -0.144 0.369
19 253373_at AT4G33150 LKR, LKR/SDH, LYSINE-KETOGLUTARATE REDUCTASE/SACCHAROPINE DEHYDROGENASE, SDH, SACCHAROPINE DEHYDROGENASE -0.141 0.585
20 265506_at AT2G15540 [non-LTR retrotransposon family (LINE), has a 2.7e-33 P-value blast match to GB:NP_038607 L1 repeat, Tf subfamily, member 9 (LINE-element) (Mus musculus)] -0.138 -1.423
21 247230_at AT5G65170 [VQ motif-containing protein] -0.130 -0.894
22 267147_at AT2G38240 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] -0.104 -0.617
23 261059_at AT1G01250 [Integrase-type DNA-binding superfamily protein] -0.102 -1.281