4.0:Information of module
RRE1
In comparison with Red/FR Light45min help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0009765 photosynthesis, light harvesting BP 2.283e-07
GO:0019684 photosynthesis, light reaction BP 2.836e-07
GO:0015979 photosynthesis BP 1.938e-06
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0034976 response to endoplasmic reticulum stress BP 1.451e-06
GO:0006950 response to stress BP 3.589e-06
GO:0050896 response to stimulus BP 1.165e-05
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
RRE1		 Log2 signal ratio
Red/FR Light45min
1 254836_at AT4G12330 CYP706A7, cytochrome P450, family 706, subfamily A, polypeptide 7 0.389 0.037
2 254232_at AT4G23600 CORI3, CORONATINE INDUCED 1, JR2, JASMONIC ACID RESPONSIVE 2 0.210 -0.033
3 254001_at AT4G26260 MIOX4, myo-inositol oxygenase 4 0.200 -0.026
4 252624_at AT3G44735 ATPSK3, PHYTOSULFOKINE 3 PRECURSOR, PSK1, PSK3, PHYTOSULFOKINE 3 PRECURSOR 0.194 -0.015
5 264527_at AT1G30760 [FAD-binding Berberine family protein] 0.193 -0.029
6 262826_at AT1G13080 CYP71B2, cytochrome P450, family 71, subfamily B, polypeptide 2 0.185 0.000
7 260385_at AT1G74090 ATSOT18, DESULFO-GLUCOSINOLATE SULFOTRANSFERASE 18, ATST5B, ARABIDOPSIS SULFOTRANSFERASE 5B, SOT18, desulfo-glucosinolate sulfotransferase 18 0.173 0.032
8 254266_at AT4G23130 CRK5, cysteine-rich RLK (RECEPTOR-like protein kinase) 5, RLK6, RECEPTOR-LIKE PROTEIN KINASE 6 0.170 -0.027
9 257163_at AT3G24310 ATMYB71, MYB DOMAIN PROTEIN 71, MYB305, myb domain protein 305 0.165 0.055
10 261585_at AT1G01010 ANAC001, NAC domain containing protein 1, NAC001, NAC domain containing protein 1 0.155 0.039
11 258033_at AT3G21250 ABCC8, ATP-binding cassette C8, ATMRP6, ARABIDOPSIS THALIANA MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 6, MRP6, multidrug resistance-associated protein 6 0.155 -0.024
12 253626_at AT4G30640 [RNI-like superfamily protein] 0.146 0.004
13 247339_at AT5G63690 [Nucleic acid-binding, OB-fold-like protein] 0.146 -0.045
14 249166_at AT5G42840 [Cysteine/Histidine-rich C1 domain family protein] 0.139 -0.003
15 254461_at AT4G21230 CRK27, cysteine-rich RLK (RECEPTOR-like protein kinase) 27 0.137 -0.020
16 253632_at AT4G30430 TET9, tetraspanin9 0.135 0.004
17 263536_at AT2G25000 ATWRKY60, WRKY60, WRKY DNA-binding protein 60 0.134 -0.006
18 260565_at AT2G43800 [Actin-binding FH2 (formin homology 2) family protein] 0.133 0.033
19 260293_at AT1G63670 TRM12, TON1 Recruiting Motif 12 0.129 -0.039
20 249409_at AT5G40340 [Tudor/PWWP/MBT superfamily protein] 0.128 0.038
21 245440_at AT4G16680 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] 0.126 -0.008
22 264954_at AT1G77060 [Phosphoenolpyruvate carboxylase family protein] 0.126 0.000
23 250365_at AT5G11410 [Protein kinase superfamily protein] 0.125 0.011
24 254242_at AT4G23200 CRK12, cysteine-rich RLK (RECEPTOR-like protein kinase) 12 0.125 -0.014
25 249639_at AT5G36930 [Disease resistance protein (TIR-NBS-LRR class) family] 0.122 -0.040
26 250907_at AT5G03670 TRM28, TON1 Recruiting Motif 28 0.121 0.033
27 264898_at AT1G23205 [Plant invertase/pectin methylesterase inhibitor superfamily protein] 0.119 -0.017
28 264037_at AT2G03750 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] 0.118 -0.009
29 252740_at AT3G43270 [Plant invertase/pectin methylesterase inhibitor superfamily] 0.117 0.001
30 257672_at AT3G20300 unknown 0.114 -0.011
31 249303_at AT5G41460 unknown 0.114 -0.042
32 266956_at AT2G34510 unknown 0.112 0.015
33 249769_at AT5G24120 ATSIG5, SIGMA FACTOR 5, SIG5, SIGMA FACTOR 5, SIGE, sigma factor E 0.111 -0.054
34 264270_at AT1G60260 BGLU5, beta glucosidase 5 0.110 -0.021
35 265709_at AT2G03540 unknown 0.110 0.021
36 264435_at AT1G10360 ATGSTU18, glutathione S-transferase TAU 18, GST29, GLUTATHIONE S-TRANSFERASE 29, GSTU18, glutathione S-transferase TAU 18 0.108 -0.016
37 262620_at AT1G06540 unknown 0.103 0.004
38 262935_at AT1G79410 AtOCT5, organic cation/carnitine transporter5, OCT5, organic cation/carnitine transporter5 0.103 -0.006
39 267084_at AT2G41180 SIB2, sigma factor binding protein 2 -0.587 0.012
40 266383_at AT2G14580 ATPRB1, basic pathogenesis-related protein 1, PRB1, basic pathogenesis-related protein 1 -0.377 0.049
41 266139_at AT2G28085 SAUR42, SMALL AUXIN UPREGULATED RNA 42 -0.325 -0.014
42 256940_at AT3G30720 QQS, QUA-QUINE STARCH -0.304 0.007
43 263574_at AT2G16990 [Major facilitator superfamily protein] -0.267 -0.023
44 267418_at AT2G35000 ATL9, Arabidopsis toxicos en levadura 9 -0.246 -0.005
45 260070_at AT1G73830 BEE3, BR enhanced expression 3 -0.234 0.009
46 260783_at AT1G06160 ORA59, octadecanoid-responsive Arabidopsis AP2/ERF 59 -0.202 -0.018
47 252517_at AT3G46340 [Leucine-rich repeat protein kinase family protein] -0.192 0.000
48 266516_at AT2G47880 [Glutaredoxin family protein] -0.177 -0.051
49 247026_at AT5G67080 MAPKKK19, mitogen-activated protein kinase kinase kinase 19 -0.170 0.020
50 260973_at AT1G53490 HEI10, homolog of human HEI10 ( Enhancer of cell Invasion No.10) -0.163 0.017
51 245227_s_at AT1G08410 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.159 0.009
52 257373_at AT2G43140 [basic helix-loop-helix (bHLH) DNA-binding superfamily protein] -0.157 -0.048
53 253182_at AT4G35190 LOG5, LONELY GUY 5 -0.157 0.008
54 251116_at AT3G63470 scpl40, serine carboxypeptidase-like 40 -0.152 0.005
55 255428_at AT4G03390 SRF3, STRUBBELIG-receptor family 3 -0.151 0.022
56 257701_at AT3G12710 [DNA glycosylase superfamily protein] -0.150 -0.011
57 257399_at AT1G23690 unknown -0.145 -0.051
58 246251_at AT4G37220 [Cold acclimation protein WCOR413 family] -0.143 0.009
59 260297_at AT1G80280 [alpha/beta-Hydrolases superfamily protein] -0.142 -0.032
60 249008_at AT5G44680 [DNA glycosylase superfamily protein] -0.135 -0.007
61 264363_at AT1G03170 FAF2, FANTASTIC FOUR 2, FTM5, FLORAL TRANSITION AT THE MERISTEM5 -0.135 -0.041
62 251197_at AT3G62960 [Thioredoxin superfamily protein] -0.135 -0.028
63 250100_at AT5G16570 GLN1;4, glutamine synthetase 1;4 -0.132 -0.011
64 255057_at AT4G09840 unknown -0.127 0.024
65 266089_at AT2G38010 [Neutral/alkaline non-lysosomal ceramidase] -0.126 0.008
66 246310_at AT3G51895 AST12, SULTR3;1, sulfate transporter 3;1 -0.123 -0.035
67 246597_at AT5G14760 AO, L-aspartate oxidase, FIN4, FLAGELLIN-INSENSITIVE 4 -0.122 -0.000
68 253207_at AT4G34770 SAUR1, SMALL AUXIN UPREGULATED RNA 1 -0.121 -0.011
69 265265_at AT2G42900 [Plant basic secretory protein (BSP) family protein] -0.121 -0.007
70 246596_at AT5G14740 BETA CA2, BETA CARBONIC ANHYDRASE 2, CA18, CARBONIC ANHYDRASE 18, CA2, carbonic anhydrase 2 -0.119 -0.016
71 264482_at AT1G77210 AtSTP14, sugar transport protein 14, STP14, sugar transport protein 14 -0.117 0.008
72 252367_at AT3G48360 ATBT2, BT2, BTB and TAZ domain protein 2 -0.117 0.006
73 254377_at AT4G21650 [Subtilase family protein] -0.117 0.002
74 246415_at AT5G17160 unknown -0.115 0.049
75 254114_at AT4G24980 UMAMIT16-psi, Usually multiple acids move in and out Transporters 16-pseudogene -0.114 -0.011