4.0:Information of module
fil-8 yab3-2
In comparison with whole roots -Fe 3 hour help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0048827 phyllome development BP 8.422e-07
GO:0042221 response to chemical BP 3.195e-06
GO:0048440 carpel development BP 4.240e-06
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0010410 hemicellulose metabolic process BP 3.088e-04
GO:0010413 glucuronoxylan metabolic process BP 5.407e-04
GO:0045492 xylan biosynthetic process BP 5.777e-04
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
fil-8 yab3-2		 Log2 signal ratio
whole roots -Fe 3 hour
1 262010_at AT1G35612 [expressed protein] 0.891 0.025
2 264433_at AT1G61810 BGLU45, beta-glucosidase 45 0.683 0.101
3 262018_at AT1G35617 unknown 0.627 0.176
4 255414_at AT4G03156 [small GTPase-related] 0.627 0.003
5 256589_at AT3G28740 CYP81D11, cytochrome P450, family 81, subfamily D, polypeptide 11 0.578 0.026
6 266462_at AT2G47770 ATTSPO, TSPO(outer membrane tryptophan-rich sensory protein)-related, TSPO, TSPO(outer membrane tryptophan-rich sensory protein)-related 0.574 0.036
7 246025_at AT5G21150 AGO9, ARGONAUTE 9 0.570 0.104
8 250287_at AT5G13330 Rap2.6L, related to AP2 6l 0.559 -0.024
9 251770_at AT3G55970 ATJRG21, JRG21, jasmonate-regulated gene 21 0.519 0.031
10 256621_at AT3G24450 [Heavy metal transport/detoxification superfamily protein ] 0.497 0.044
11 267472_at AT2G02850 ARPN, plantacyanin 0.497 0.034
12 250344_at AT5G11930 [Thioredoxin superfamily protein] 0.490 0.042
13 264824_at AT1G03420 Sadhu4-2, sadhu non-coding retrotransposon 4-2 0.467 0.018
14 264497_at AT1G30840 ATPUP4, purine permease 4, PUP4, purine permease 4 0.448 -0.001
15 255543_at AT4G01870 [tolB protein-related] 0.422 -0.015
16 263238_at AT2G16580 SAUR8, SMALL AUXIN UPREGULATED RNA 8 0.416 0.036
17 257460_at AT1G75580 SAUR51, SMALL AUXIN UPREGULATED RNA 51 0.395 -0.032
18 250476_at AT5G10140 AGL25, AGAMOUS-like 25, FLC, FLOWERING LOCUS C, FLF, FLOWERING LOCUS F, RSB6, REDUCED STEM BRANCHING 6 0.390 0.028
19 264741_at AT1G62290 [Saposin-like aspartyl protease family protein] 0.382 0.031
20 262001_at AT1G33790 [jacalin lectin family protein] 0.371 0.009
21 253084_at AT4G36260 SRS2, SHI RELATED SEQUENCE 2, STY2, STYLISH 2 0.368 0.027
22 261899_at AT1G80820 ATCCR2, CCR2, cinnamoyl coa reductase 0.360 0.044
23 255900_at AT1G17830 unknown 0.348 -0.020
24 257306_at AT3G30200 [Plant transposase (Ptta/En/Spm family)] 0.344 -0.042
25 253660_at AT4G30140 CDEF1, CUTICLE DESTRUCTING FACTOR 1 -1.341 -0.082
26 266383_at AT2G14580 ATPRB1, basic pathogenesis-related protein 1, PRB1, basic pathogenesis-related protein 1 -1.090 -0.065
27 254232_at AT4G23600 CORI3, CORONATINE INDUCED 1, JR2, JASMONIC ACID RESPONSIVE 2 -1.030 0.018
28 254452_at AT4G21100 DDB1B, damaged DNA binding protein 1B -1.001 -0.012
29 254327_at AT4G22490 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -1.001 -0.040
30 247713_at AT5G59330 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.975 0.058
31 249101_at AT5G43580 UPI, UNUSUAL SERINE PROTEASE INHIBITOR -0.760 0.009
32 255709_at AT4G00180 YAB3, YABBY3 -0.640 -0.169
33 255265_at AT4G05190 ATK5, kinesin 5 -0.593 0.018
34 245138_at AT2G45190 AFO, ABNORMAL FLORAL ORGANS, FIL, FILAMENTOUS FLOWER, YAB1, YABBY1 -0.545 -0.088
35 250828_at AT5G05250 unknown -0.400 -0.005
36 261574_at AT1G01190 CYP78A8, cytochrome P450, family 78, subfamily A, polypeptide 8 -0.355 0.040
37 252612_at AT3G45160 [Putative membrane lipoprotein] -0.294 -0.031
38 248864_at AT5G46760 MYC3 -0.270 -0.045
39 250395_at AT5G10950 [Tudor/PWWP/MBT superfamily protein] -0.265 0.016
40 249546_at AT5G38150 PMI15, plastid movement impaired 15 -0.262 -0.077
41 250566_at AT5G08070 TCP17, TCP domain protein 17 -0.257 -0.096
42 263909_at AT2G36490 AtROS1, DML1, demeter-like 1, ROS1, REPRESSOR OF SILENCING1 -0.253 0.019
43 255422_at AT4G03270 CYCD6;1, Cyclin D6;1 -0.251 0.023
44 262637_at AT1G06640 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] -0.246 -0.018
45 248694_at AT5G48340 unknown -0.244 -0.033
46 260034_at AT1G68810 [basic helix-loop-helix (bHLH) DNA-binding superfamily protein] -0.220 0.005
47 260065_at AT1G73760 [RING/U-box superfamily protein] -0.214 0.024