4.0:Information of module
ein3 eil1 JA
In comparison with Dark 2day ivd help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0009719 response to endogenous stimulus BP 1.876e-09
GO:0009725 response to hormone BP 2.206e-09
GO:0006950 response to stress BP 1.705e-08
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0050896 response to stimulus BP 8.758e-10
GO:0042221 response to chemical BP 1.337e-08
GO:0015706 nitrate transport BP 1.022e-07
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
ein3 eil1 JA		 Log2 signal ratio
Dark 2day ivd
1 266989_at AT2G39330 JAL23, jacalin-related lectin 23 0.956 -3.818
2 253060_at AT4G37710 [VQ motif-containing protein] 0.849 0.051
3 256382_at AT1G66860 [Class I glutamine amidotransferase-like superfamily protein] 0.816 0.051
4 249052_at AT5G44420 LCR77, LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 77, PDF1.2, plant defensin 1.2, PDF1.2A, PLANT DEFENSIN 1.2A 0.803 2.260
5 256766_at AT3G22231 PCC1, PATHOGEN AND CIRCADIAN CONTROLLED 1 0.782 -9.837
6 264636_at AT1G65490 unknown 0.742 -7.345
7 264635_at AT1G65500 unknown 0.710 0.009
8 256603_at AT3G28270 unknown 0.658 -5.031
9 254059_at AT4G25200 ATHSP23.6-MITO, mitochondrion-localized small heat shock protein 23.6, HSP23.6-MITO, mitochondrion-localized small heat shock protein 23.6 0.654 0.051
10 246001_at AT5G20790 unknown 0.650 -5.383
11 266821_at AT2G44840 ATERF13, ETHYLENE-RESPONSIVE ELEMENT BINDING FACTOR 13, EREBP, ERF13, ethylene-responsive element binding factor 13 0.611 -2.975
12 249205_at AT5G42600 MRN1, marneral synthase 1 0.596 0.051
13 259388_at AT1G13420 ATST4B, ARABIDOPSIS THALIANA SULFOTRANSFERASE 4B, ST4B, sulfotransferase 4B 0.564 -0.479
14 245226_at AT3G29970 [B12D protein] 0.474 0.051
15 259866_at AT1G76640 CML39, CALMODULIN LIKE 39 0.458 0.051
16 248448_at AT5G51190 [Integrase-type DNA-binding superfamily protein] 0.414 -3.200
17 267457_at AT2G33790 AGP30, arabinogalactan protein 30, ATAGP30 0.395 0.051
18 260804_at AT1G78410 [VQ motif-containing protein] 0.393 -3.415
19 260522_x_at AT2G41730 unknown 0.391 -1.674
20 249004_at AT5G44570 unknown 0.390 -1.620
21 256368_at AT1G66800 [NAD(P)-binding Rossmann-fold superfamily protein] 0.385 0.051
22 263174_at AT1G54040 ESP, epithiospecifier protein, ESR, EPITHIOSPECIFYING SENESCENCE REGULATOR, TASTY 0.363 -2.577
23 266828_at AT2G22930 [UDP-Glycosyltransferase superfamily protein] 0.361 0.051
24 250942_at AT5G03350 [Legume lectin family protein] 0.328 -8.077
25 263495_at AT2G42530 COR15B, cold regulated 15b 0.319 -0.760
26 260666_at AT1G19300 ATGATL1, GATL1, GALACTURONOSYLTRANSFERASE-LIKE 1, GLZ1, GAOLAOZHUANGREN 1, PARVUS, PARVUS 0.318 -1.912
27 248353_at AT5G52320 CYP96A4, cytochrome P450, family 96, subfamily A, polypeptide 4 0.317 -2.973
28 263318_at AT2G24762 AtGDU4, glutamine dumper 4, GDU4, glutamine dumper 4 0.317 -4.618
29 262304_at AT1G70890 MLP43, MLP-like protein 43 0.305 0.252
30 246071_at AT5G20150 ATSPX1, ARABIDOPSIS THALIANA SPX DOMAIN GENE 1, SPX1, SPX domain gene 1 0.302 -0.316
31 260812_at AT1G43650 UMAMIT22, Usually multiple acids move in and out Transporters 22 0.301 -1.053
32 258349_at AT3G17609 HYH, HY5-homolog 0.295 -6.892
33 264940_at AT1G60470 AtGolS4, galactinol synthase 4, GolS4, galactinol synthase 4 0.269 0.051
34 259596_at AT1G28130 GH3.17 0.264 0.379
35 250099_at AT5G17300 RVE1, REVEILLE 1 0.257 -2.792
36 245267_at AT4G14060 [Polyketide cyclase/dehydrase and lipid transport superfamily protein] 0.256 0.051
37 251761_at AT3G55700 [UDP-Glycosyltransferase superfamily protein] 0.247 -2.845
38 263594_at AT2G01880 ATPAP7, PURPLE ACID PHOSPHATASE 7, PAP7, purple acid phosphatase 7 0.246 0.051
39 266364_at AT2G41230 ORS1, ORGAN SIZE RELATED 1 -1.171 0.056
40 249364_at AT5G40590 [Cysteine/Histidine-rich C1 domain family protein] -0.945 0.051
41 263680_at AT1G26930 [Galactose oxidase/kelch repeat superfamily protein] -0.875 0.343
42 251436_at AT3G59900 ARGOS, AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE -0.749 -0.355
43 249454_at AT5G39520 unknown -0.720 8.078
44 264645_at AT1G08940 [Phosphoglycerate mutase family protein] -0.703 -1.438
45 252320_at AT3G48580 XTH11, xyloglucan endotransglucosylase/hydrolase 11 -0.657 4.317
46 247337_at AT5G63660 LCR74, LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 74, PDF2.5 -0.642 0.051
47 260070_at AT1G73830 BEE3, BR enhanced expression 3 -0.566 -1.530
48 245393_at AT4G16260 [Glycosyl hydrolase superfamily protein] -0.536 2.204
49 246935_at AT5G25350 EBF2, EIN3-binding F box protein 2 -0.529 0.881
50 257922_at AT3G23150 ETR2, ethylene response 2 -0.517 3.439
51 248208_at AT5G53980 ATHB52, homeobox protein 52, HB52, homeobox protein 52 -0.501 1.919
52 254726_at AT4G13660 ATPRR2, PRR2, pinoresinol reductase 2 -0.495 0.582
53 263970_at AT2G42850 CYP718, cytochrome P450, family 718 -0.435 0.755
54 246476_at AT5G16730 [LOCATED IN: chloroplast] -0.419 0.704
55 264510_at AT1G09530 PAP3, PHYTOCHROME-ASSOCIATED PROTEIN 3, PIF3, phytochrome interacting factor 3, POC1, PHOTOCURRENT 1 -0.413 1.213
56 246390_at AT1G77330 ACO5, ACC oxidase 5 -0.412 1.174
57 258434_at AT3G16770 ATEBP, ethylene-responsive element binding protein, EBP, ethylene-responsive element binding protein, ERF72, ETHYLENE RESPONSE FACTOR 72, RAP2.3, RELATED TO AP2 3 -0.404 4.134
58 260438_at AT1G68290 ENDO2, endonuclease 2 -0.365 0.146
59 264777_at AT1G08630 THA1, threonine aldolase 1 -0.361 11.139
60 249271_at AT5G41790 CIP1, COP1-interactive protein 1 -0.323 0.283
61 250450_at AT5G10280 ATMYB64, ATMYB92, myb domain protein 92, MYB92, myb domain protein 92 -0.306 0.051
62 262912_at AT1G59740 AtNPF4.3, NPF4.3, NRT1/ PTR family 4.3 -0.295 -1.516
63 258935_at AT3G10120 unknown -0.290 1.299
64 250680_at AT5G06570 [alpha/beta-Hydrolases superfamily protein] -0.290 3.748
65 267337_at AT2G39980 [HXXXD-type acyl-transferase family protein] -0.270 1.661
66 266765_at AT2G46860 AtPPa3, pyrophosphorylase 3, PPa3, pyrophosphorylase 3 -0.267 0.051
67 261562_at AT1G01750 ADF11, actin depolymerizing factor 11 -0.264 1.132
68 257460_at AT1G75580 SAUR51, SMALL AUXIN UPREGULATED RNA 51 -0.261 -3.650
69 264525_at AT1G10060 ATBCAT-1, branched-chain amino acid transaminase 1, BCAT-1, branched-chain amino acid transaminase 1, BCAT1, branched-chain amino acid transferase 1 -0.256 0.675
70 261117_at AT1G75310 AUL1, auxilin-like 1 -0.255 1.266
71 250746_at AT5G05880 [UDP-Glycosyltransferase superfamily protein] -0.248 2.780
72 265913_at AT2G25625 unknown -0.234 1.232
73 253582_at AT4G30670 [Putative membrane lipoprotein] -0.231 2.879
74 246493_at AT5G16180 ATCRS1, ARABIDOPSIS ORTHOLOG OF MAIZE CHLOROPLAST SPLICING FACTOR CRS1, CRS1, ortholog of maize chloroplast splicing factor CRS1 -0.228 0.102
75 261395_at AT1G79700 WRI4, WRINKLED 4 -0.228 2.456