4.0:Information of module
JA
In comparison with Shoot apex inflorescence (after bolting) help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0019748 secondary metabolic process BP 1.986e-21
GO:0044712 single-organism catabolic process BP 1.065e-16
GO:0009753 response to jasmonic acid BP 5.188e-16
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0009825 multidimensional cell growth BP 4.732e-15
GO:0043473 pigmentation BP 1.907e-12
GO:0043476 pigment accumulation BP 1.907e-12
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
JA		 Log2 signal ratio
Shoot apex inflorescence (after bolting)
1 249732_at AT5G24420 PGL5, 6-phosphogluconolactonase 5 0.858 0.953
2 263161_at AT1G54020 [GDSL-like Lipase/Acylhydrolase superfamily protein] 0.849 1.242
3 256159_at AT1G30135 JAZ8, jasmonate-zim-domain protein 8, TIFY5A 0.768 0.063
4 266290_at AT2G29490 ATGSTU1, glutathione S-transferase TAU 1, GST19, GLUTATHIONE S-TRANSFERASE 19, GSTU1, glutathione S-transferase TAU 1 0.751 -0.079
5 266142_at AT2G39030 NATA1, N-acetyltransferase activity 1 0.745 -1.307
6 265501_at AT2G15490 UGT73B4, UDP-glycosyltransferase 73B4 0.709 -1.207
7 262517_at AT1G17180 ATGSTU25, glutathione S-transferase TAU 25, GSTU25, glutathione S-transferase TAU 25 0.677 -0.929
8 264514_at AT1G09500 [NAD(P)-binding Rossmann-fold superfamily protein] 0.650 -0.283
9 260405_at AT1G69930 ATGSTU11, glutathione S-transferase TAU 11, GSTU11, glutathione S-transferase TAU 11 0.642 -0.577
10 255786_at AT1G19670 ATCLH1, chlorophyllase 1, ATHCOR1, CORONATINE-INDUCED PROTEIN 1, CLH1, chlorophyllase 1, CORI1, CORONATINE-INDUCED PROTEIN 1 0.600 0.374
11 263231_at AT1G05680 UGT74E2, Uridine diphosphate glycosyltransferase 74E2 0.563 -0.490
12 255527_at AT4G02360 unknown 0.559 -0.639
13 265499_at AT2G15480 UGT73B5, UDP-glucosyl transferase 73B5 0.542 0.231
14 252618_at AT3G45140 ATLOX2, ARABIODOPSIS THALIANA LIPOXYGENASE 2, LOX2, lipoxygenase 2 0.538 0.680
15 250960_at AT5G02940 unknown 0.519 0.370
16 248392_at AT5G52050 [MATE efflux family protein] 0.513 -0.175
17 266901_at AT2G34600 JAZ7, jasmonate-zim-domain protein 7, TIFY5B 0.487 0.044
18 245253_at AT4G15440 CYP74B2, HPL1, hydroperoxide lyase 1 0.471 0.321
19 252265_at AT3G49620 DIN11, DARK INDUCIBLE 11 0.456 -0.151
20 254343_at AT4G21990 APR3, APS reductase 3, ATAPR3, PRH-26, PRH26, PAPS REDUCTASE HOMOLOG 26 0.453 0.175
21 246485_at AT5G16080 AtCXE17, carboxyesterase 17, CXE17, carboxyesterase 17 0.448 -0.687
22 256527_at AT1G66100 [Plant thionin] 0.434 -1.311
23 262608_at AT1G14120 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] 0.431 -1.480
24 251420_at AT3G60490 [Integrase-type DNA-binding superfamily protein] 0.430 -0.221
25 259548_at AT1G35260 MLP165, MLP-like protein 165 0.425 -0.507
26 251503_at AT3G59140 ABCC10, ATP-binding cassette C10, ATMRP14, multidrug resistance-associated protein 14, MRP14, multidrug resistance-associated protein 14 0.419 0.533
27 262653_at AT1G14130 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] 0.416 0.212
28 264145_at AT1G79310 AtMC7, metacaspase 7, AtMCP2a, metacaspase 2a, MC7, metacaspase 7, MCP2a, metacaspase 2a 0.411 0.149
29 262580_at AT1G15330 [Cystathionine beta-synthase (CBS) protein] 0.408 -0.509
30 246429_at AT5G17450 HIPP21, heavy metal associated isoprenylated plant protein 21 0.402 -0.268
31 257517_at AT3G16330 unknown 0.397 -0.211
32 252368_at AT3G48520 CYP94B3, cytochrome P450, family 94, subfamily B, polypeptide 3 0.381 -0.658
33 259831_at AT1G69600 ATHB29, ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 29, ZFHD1, zinc finger homeodomain 1, ZHD11, ZINC FINGER HOMEODOMAIN 11 0.379 0.753
34 250292_at AT5G13220 JAS1, JASMONATE-ASSOCIATED 1, JAZ10, jasmonate-zim-domain protein 10, TIFY9, TIFY DOMAIN PROTEIN 9 0.377 0.615
35 245953_at AT5G28520 [Mannose-binding lectin superfamily protein] 0.371 0.519
36 246584_at AT5G14730 unknown 0.371 -0.334
37 263098_at AT2G16005 [MD-2-related lipid recognition domain-containing protein] 0.368 -0.859
38 259705_at AT1G77450 anac032, NAC domain containing protein 32, NAC032, NAC domain containing protein 32 0.361 -0.859
39 247024_at AT5G66985 unknown 0.356 -0.000
40 251916_at AT3G53960 [Major facilitator superfamily protein] 0.349 -0.370
41 247573_at AT5G61160 AACT1, anthocyanin 5-aromatic acyltransferase 1 0.344 -0.258
42 249942_at AT5G22300 AtNIT4, NITRILASE 4, NIT4, nitrilase 4 0.341 -0.420
43 257460_at AT1G75580 SAUR51, SMALL AUXIN UPREGULATED RNA 51 0.339 1.099
44 266419_at AT2G38760 ANN3, ANNEXIN 3, ANNAT3, annexin 3, AtANN3 0.334 -0.690
45 253880_at AT4G27590 [Heavy metal transport/detoxification superfamily protein ] 0.329 0.373
46 254318_at AT4G22530 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] 0.328 -0.303
47 262383_at AT1G72940 [Toll-Interleukin-Resistance (TIR) domain-containing protein] 0.325 -0.248
48 248311_at AT5G52570 B2, BCH2, BETA CAROTENOID HYDROXYLASE 2, BETA-OHASE 2, beta-carotene hydroxylase 2, CHY2 0.325 -0.189
49 258002_at AT3G28930 AIG2, AVRRPT2-INDUCED GENE 2 0.323 -0.651
50 247949_at AT5G57220 CYP81F2, cytochrome P450, family 81, subfamily F, polypeptide 2 0.323 -0.922
51 260784_at AT1G06180 ATMYB13, myb domain protein 13, ATMYBLFGN, MYB13, myb domain protein 13 0.322 -0.690
52 250483_at AT5G10300 AtHNL, ATMES5, ARABIDOPSIS THALIANA METHYL ESTERASE 5, HNL, HYDROXYNITRILE LYASE, MES5, methyl esterase 5 0.320 0.823
53 263184_at AT1G05560 UGT1, UDP-GLUCOSE TRANSFERASE 1, UGT75B1, UDP-glucosyltransferase 75B1 0.317 -0.162
54 263182_at AT1G05575 unknown 0.310 -0.066
55 266977_at AT2G39420 [alpha/beta-Hydrolases superfamily protein] 0.309 -0.280
56 251942_at AT3G53480 ABCG37, ATP-binding cassette G37, ATPDR9, PLEIOTROPIC DRUG RESISTANCE 9, PDR9, pleiotropic drug resistance 9, PIS1, polar auxin transport inhibitor sensitive 1 0.303 -0.697
57 247175_at AT5G65280 GCL1, GCR2-like 1 0.295 0.575
58 267411_at AT2G34930 [disease resistance family protein / LRR family protein] 0.290 -1.073
59 257206_at AT3G16530 [Legume lectin family protein] 0.288 0.033
60 260541_at AT2G43530 [Scorpion toxin-like knottin superfamily protein] 0.286 0.752
61 250252_at AT5G13750 ZIFL1, zinc induced facilitator-like 1 0.285 -0.289
62 254759_at AT4G13180 [NAD(P)-binding Rossmann-fold superfamily protein] 0.284 0.057
63 250149_at AT5G14700 [NAD(P)-binding Rossmann-fold superfamily protein] 0.282 0.068
64 261266_at AT1G26770 AT-EXP10, ARABIDOPSIS THALIANA EXPANSIN 10, ATEXP10, ARABIDOPSIS THALIANA EXPANSIN 10, ATEXPA10, expansin A10, ATHEXP ALPHA 1.1, ARABIDOPSIS THALIANA EXPANSIN ALPHA 1.1, EXP10, EXPANSIN 10, EXPA10, expansin A10 0.280 0.381
65 248381_at AT5G51830 [pfkB-like carbohydrate kinase family protein] 0.269 -0.085
66 259040_at AT3G09270 ATGSTU8, glutathione S-transferase TAU 8, GSTU8, glutathione S-transferase TAU 8 0.266 -0.805
67 261618_at AT1G33110 [MATE efflux family protein] 0.265 0.783
68 259979_at AT1G76600 unknown 0.257 -0.317
69 255822_at AT2G40610 ATEXP8, ATEXPA8, expansin A8, ATHEXP ALPHA 1.11, EXP8, EXPA8, expansin A8 -0.861 -0.203
70 259839_at AT1G52190 AtNPF1.2, NPF1.2, NRT1/ PTR family 1.2, NRT1.11, nitrate transporter 1.11 -0.529 1.423
71 260221_at AT1G74670 GASA6, GA-stimulated Arabidopsis 6 -0.527 0.320
72 251298_at AT3G62040 [Haloacid dehalogenase-like hydrolase (HAD) superfamily protein] -0.522 -0.569
73 267457_at AT2G33790 AGP30, arabinogalactan protein 30, ATAGP30 -0.516 -1.227
74 248912_at AT5G45670 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.501 0.904
75 262290_at AT1G70985 [hydroxyproline-rich glycoprotein family protein] -0.458 -0.258
76 251017_at AT5G02760 APD7, Arabidopsis Pp2c clade D 7 -0.443 -0.001
77 258552_at AT3G07010 [Pectin lyase-like superfamily protein] -0.423 0.204
78 258895_at AT3G05600 [alpha/beta-Hydrolases superfamily protein] -0.407 0.880
79 253608_at AT4G30290 ATXTH19, XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 19, XTH19, xyloglucan endotransglucosylase/hydrolase 19 -0.380 -0.444
80 246933_at AT5G25160 ZFP3, zinc finger protein 3 -0.373 -0.176
81 260753_at AT1G49230 AtATL78, ATL78, Arabidopsis T?xicos en Levadura 78 -0.370 -0.819
82 265342_at AT2G18300 HBI1, HOMOLOG OF BEE2 INTERACTING WITH IBH 1 -0.365 -0.790
83 250366_at AT5G11420 unknown -0.365 0.061
84 257623_at AT3G26210 CYP71B23, cytochrome P450, family 71, subfamily B, polypeptide 23 -0.364 -0.429
85 260770_at AT1G49200 [RING/U-box superfamily protein] -0.364 -1.273
86 251072_at AT5G01740 [Nuclear transport factor 2 (NTF2) family protein] -0.356 -0.436
87 250214_at AT5G13870 EXGT-A4, endoxyloglucan transferase A4, XTH5, xyloglucan endotransglucosylase/hydrolase 5 -0.344 0.294
88 264611_at AT1G04680 [Pectin lyase-like superfamily protein] -0.344 0.290
89 259375_at AT3G16370 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.338 0.314
90 249061_at AT5G44550 [Uncharacterised protein family (UPF0497)] -0.319 -0.685
91 248891_at AT5G46280 MCM3, MINICHROMOSOME MAINTENANCE 3 -0.314 0.631
92 264370_at AT1G12100 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.313 0.226
93 249008_at AT5G44680 [DNA glycosylase superfamily protein] -0.309 0.415
94 258764_at AT3G10720 [Plant invertase/pectin methylesterase inhibitor superfamily] -0.307 0.310
95 260070_at AT1G73830 BEE3, BR enhanced expression 3 -0.307 -1.201
96 267287_at AT2G23630 sks16, SKU5 similar 16 -0.305 -0.087
97 246251_at AT4G37220 [Cold acclimation protein WCOR413 family] -0.304 -0.661
98 253617_at AT4G30410 [sequence-specific DNA binding transcription factors] -0.300 -0.024
99 250012_x_at AT5G18060 SAUR23, SMALL AUXIN UP RNA 23 -0.295 0.348
100 262743_at AT1G29020 [Calcium-binding EF-hand family protein] -0.292 -0.864
101 256337_at AT1G72060 [serine-type endopeptidase inhibitors] -0.292 -0.452
102 246229_at AT4G37160 sks15, SKU5 similar 15 -0.290 0.017
103 259786_at AT1G29660 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.289 -0.742
104 250277_at AT5G12940 [Leucine-rich repeat (LRR) family protein] -0.277 -0.410
105 258736_at AT3G05900 [neurofilament protein-related] -0.276 0.239
106 256237_at AT3G12610 DRT100, DNA-DAMAGE REPAIR/TOLERATION 100 -0.274 0.585
107 263318_at AT2G24762 AtGDU4, glutamine dumper 4, GDU4, glutamine dumper 4 -0.266 -0.784
108 254609_at AT4G18970 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.261 0.121
109 265817_at AT2G18050 HIS1-3, histone H1-3 -0.260 -0.026
110 246562_at AT5G15580 LNG1, LONGIFOLIA1, TRM2, TON1 Recruiting Motif 2 -0.259 0.443
111 252272_at AT3G49670 BAM2, BARELY ANY MERISTEM 2 -0.259 0.443
112 253971_at AT4G26530 AtFBA5, FBA5, fructose-bisphosphate aldolase 5 -0.256 -0.399
113 247069_at AT5G66920 sks17, SKU5 similar 17 -0.252 -0.440
114 266460_at AT2G47930 AGP26, arabinogalactan protein 26, ATAGP26, ARABIDOPSIS THALIANA ARABINOGALACTAN PROTEIN 26 -0.249 0.652
115 245318_at AT4G16980 [arabinogalactan-protein family] -0.249 0.703
116 261717_at AT1G18400 BEE1, BR enhanced expression 1 -0.248 -0.662
117 259388_at AT1G13420 ATST4B, ARABIDOPSIS THALIANA SULFOTRANSFERASE 4B, ST4B, sulfotransferase 4B -0.247 -0.664
118 263953_at AT2G36050 ATOFP15, ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 15, OFP15, ovate family protein 15 -0.247 0.163
119 262728_at AT1G75820 ATCLV1, CLV1, CLAVATA 1, FAS3, FASCIATA 3, FLO5, FLOWER DEVELOPMENT 5 -0.245 0.188
120 261480_at AT1G14280 PKS2, phytochrome kinase substrate 2 -0.244 -0.130
121 248327_at AT5G52750 [Heavy metal transport/detoxification superfamily protein ] -0.242 0.452
122 259797_at AT1G64410 unknown -0.242 -1.206
123 266745_at AT2G02950 PKS1, phytochrome kinase substrate 1 -0.238 -1.038
124 267384_at AT2G44370 [Cysteine/Histidine-rich C1 domain family protein] -0.237 -0.813
125 252172_at AT3G50640 unknown -0.230 -0.483
126 259021_at AT3G07540 [Actin-binding FH2 (formin homology 2) family protein] -0.229 -0.324
127 250099_at AT5G17300 RVE1, REVEILLE 1 -0.228 -0.599
128 245325_at AT4G14130 XTH15, xyloglucan endotransglucosylase/hydrolase 15, XTR7, xyloglucan endotransglycosylase 7 -0.224 0.049
129 255050_at AT4G09700 unknown -0.223 -0.291
130 264342_at AT1G12080 [Vacuolar calcium-binding protein-related] -0.222 -0.119
131 245657_at AT1G56720 [Protein kinase superfamily protein] -0.219 -0.306
132 251857_at AT3G54770 ARP1, ABA-regulated RNA-binding protein 1 -0.219 0.170
133 246011_at AT5G08330 AtTCP11, TCP11, TCP domain protein 11 -0.216 1.371
134 262643_at AT1G62770 [Plant invertase/pectin methylesterase inhibitor superfamily protein] -0.215 -0.805
135 253580_at AT4G30400 [RING/U-box superfamily protein] -0.210 0.101