4.0:Information of module
FAMA induced 4h
In comparison with cat2-2; harvested 8h continiously maintained in high CO2; help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0005982 starch metabolic process BP 2.269e-11
GO:0016143 S-glycoside metabolic process BP 4.115e-10
GO:0019757 glycosinolate metabolic process BP 4.115e-10
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0071705 nitrogen compound transport BP 6.762e-16
GO:0006820 anion transport BP 2.837e-15
GO:1901698 response to nitrogen compound BP 1.577e-14
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
FAMA induced 4h		 Log2 signal ratio
cat2-2; harvested 8h continiously maintained in high CO2;
1 257247_at AT3G24140 FMA, FAMA 0.997 0.100
2 263829_at AT2G40435 unknown 0.582 0.026
3 250351_at AT5G12030 AT-HSP17.6A, heat shock protein 17.6A, HSP17.6, HEAT SHOCK PROTEIN 17.6, HSP17.6A, heat shock protein 17.6A 0.489 -0.094
4 247095_at AT5G66400 ATDI8, ARABIDOPSIS THALIANA DROUGHT-INDUCED 8, RAB18, RESPONSIVE TO ABA 18 0.429 0.067
5 257876_at AT3G17130 [Plant invertase/pectin methylesterase inhibitor superfamily protein] 0.372 -0.003
6 260012_at AT1G67865 unknown 0.368 -0.014
7 266841_at AT2G26150 ATHSFA2, heat shock transcription factor A2, HSFA2, heat shock transcription factor A2 0.297 -0.079
8 255331_at AT4G04330 AtRbcX1, RbcX1, homologue of cyanobacterial RbcX 1 0.289 0.010
9 260248_at AT1G74310 ATHSP101, heat shock protein 101, HOT1, HSP101, heat shock protein 101 0.280 -0.009
10 250381_at AT5G11610 [Exostosin family protein] 0.248 0.080
11 253971_at AT4G26530 AtFBA5, FBA5, fructose-bisphosphate aldolase 5 0.236 0.079
12 261431_at AT1G18710 AtMYB47, myb domain protein 47, MYB47, myb domain protein 47 0.227 0.096
13 251753_at AT3G55760 unknown 0.214 0.034
14 258702_at AT3G09730 unknown 0.212 0.061
15 266320_at AT2G46640 TAC1, Tiller Angle Control 1 0.208 0.040
16 252661_at AT3G44450 unknown 0.207 -0.038
17 263374_at AT2G20560 [DNAJ heat shock family protein] 0.206 -0.052
18 258322_at AT3G22740 HMT3, homocysteine S-methyltransferase 3 0.197 -0.018
19 248332_at AT5G52640 ATHS83, AtHsp90-1, HEAT SHOCK PROTEIN 90-1, ATHSP90.1, heat shock protein 90.1, HSP81-1, HEAT SHOCK PROTEIN 81-1, HSP81.1, HSP83, HEAT SHOCK PROTEIN 83, HSP90.1, heat shock protein 90.1 0.189 -0.128
20 261428_at AT1G18870 ATICS2, ARABIDOPSIS ISOCHORISMATE SYNTHASE 2, ICS2, isochorismate synthase 2 0.188 0.099
21 261921_at AT1G65900 unknown 0.184 0.016
22 261913_at AT1G65860 FMO GS-OX1, flavin-monooxygenase glucosinolate S-oxygenase 1 0.182 0.010
23 247216_at AT5G64860 DPE1, disproportionating enzyme 0.174 0.037
24 259735_at AT1G64405 unknown 0.168 -0.049
25 253779_at AT4G28490 HAE, HAESA, RLK5, RECEPTOR-LIKE PROTEIN KINASE 5 0.167 -0.067
26 255607_at AT4G01130 [GDSL-like Lipase/Acylhydrolase superfamily protein] 0.164 0.048
27 260547_at AT2G43550 [Scorpion toxin-like knottin superfamily protein] 0.161 0.009
28 250971_at AT5G02810 APRR7, PRR7, pseudo-response regulator 7 0.156 0.065
29 245593_at AT4G14550 IAA14, indole-3-acetic acid inducible 14, SLR, SOLITARY ROOT 0.153 0.163
30 266707_at AT2G03310 unknown 0.151 0.015
31 259616_at AT1G47960 ATC/VIF1, CELL WALL / VACUOLAR INHIBITOR OF FRUCTOSIDASE 1, C/VIF1, cell wall / vacuolar inhibitor of fructosidase 1 0.148 -0.038
32 260086_at AT1G63240 unknown 0.146 0.080
33 259081_at AT3G05030 ATNHX2, NHX2, sodium hydrogen exchanger 2 0.146 0.038
34 249645_at AT5G36910 THI2.2, thionin 2.2 0.146 0.059
35 248916_at AT5G45840 [Leucine-rich repeat protein kinase family protein] 0.146 -0.064
36 256527_at AT1G66100 [Plant thionin] 0.139 0.018
37 257832_at AT3G26740 CCL, CCR-like 0.138 -0.004
38 266364_at AT2G41230 ORS1, ORGAN SIZE RELATED 1 -0.637 -0.396
39 263403_at AT2G04040 ATDTX1, DTX1, detoxification 1, TX1 -0.494 -0.111
40 263402_at AT2G04050 [MATE efflux family protein] -0.482 -0.027
41 255934_at AT1G12740 CYP87A2, cytochrome P450, family 87, subfamily A, polypeptide 2 -0.459 -0.074
42 253998_at AT4G26010 [Peroxidase superfamily protein] -0.459 0.028
43 265208_at AT2G36690 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] -0.431 -0.296
44 261892_at AT1G80840 ATWRKY40, WRKY40, WRKY DNA-binding protein 40 -0.395 -0.356
45 249467_at AT5G39610 ANAC092, Arabidopsis NAC domain containing protein 92, ATNAC2, NAC domain containing protein 2, ATNAC6, NAC domain containing protein 6, NAC2, NAC domain containing protein 2, NAC6, NAC domain containing protein 6, ORE1, ORESARA 1 -0.385 -0.366
46 254314_at AT4G22470 [protease inhibitor/seed storage/lipid transfer protein (LTP) family protein] -0.375 -0.335
47 249459_at AT5G39580 [Peroxidase superfamily protein] -0.371 -0.507
48 264616_at AT2G17740 [Cysteine/Histidine-rich C1 domain family protein] -0.359 -0.388
49 257774_at AT3G29250 AtSDR4, SDR4, short-chain dehydrogenase reductase 4 -0.359 -0.150
50 259365_at AT1G13300 HRS1, HYPERSENSITIVITY TO LOW PI-ELICITED PRIMARY ROOT SHORTENING 1 -0.358 -0.063
51 256522_at AT1G66160 ATCMPG1, CMPG1, CYS, MET, PRO, and GLY protein 1 -0.354 -0.204
52 266658_at AT2G25735 unknown -0.353 -0.180
53 246366_at AT1G51850 [Leucine-rich repeat protein kinase family protein] -0.347 -0.530
54 245172_at AT2G47540 [Pollen Ole e 1 allergen and extensin family protein] -0.344 0.028
55 264400_at AT1G61800 ATGPT2, ARABIDOPSIS GLUCOSE-6-PHOSPHATE/PHOSPHATE TRANSLOCATOR 2, GPT2, glucose-6-phosphate/phosphate translocator 2 -0.340 -0.192
56 248727_at AT5G47990 CYP705A5, cytochrome P450, family 705, subfamily A, polypeptide 5, THAD, THALIAN-DIOL DESATURASE, THAD1, THALIAN-DIOL DESATURASE -0.327 -0.004
57 258487_at AT3G02550 LBD41, LOB domain-containing protein 41 -0.299 -0.049
58 252511_at AT3G46280 [protein kinase-related] -0.277 -0.427
59 245392_at AT4G15680 [Thioredoxin superfamily protein] -0.277 -0.139
60 246854_at AT5G26200 [Mitochondrial substrate carrier family protein] -0.261 -0.049
61 258935_at AT3G10120 unknown -0.261 -0.098
62 261951_at AT1G64490 [DEK, chromatin associated protein] -0.256 -0.162
63 265766_at AT2G48080 [oxidoreductase, 2OG-Fe(II) oxygenase family protein] -0.255 0.065
64 256878_at AT3G26460 [Polyketide cyclase/dehydrase and lipid transport superfamily protein] -0.243 -0.081
65 247524_at AT5G61440 ACHT5, atypical CYS HIS rich thioredoxin 5 -0.237 0.045
66 249848_at AT5G23220 NIC3, nicotinamidase 3 -0.233 -0.036
67 263208_at AT1G10480 ZFP5, zinc finger protein 5 -0.229 -0.047
68 245505_at AT4G15690 [Thioredoxin superfamily protein] -0.226 -0.074
69 258100_at AT3G23550 [MATE efflux family protein] -0.224 -0.136
70 267409_at AT2G34910 unknown -0.220 0.058
71 267083_at AT2G41100 ATCAL4, ARABIDOPSIS THALIANA CALMODULIN LIKE 4, TCH3, TOUCH 3 -0.216 -0.139
72 253628_at AT4G30280 ATXTH18, XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 18, XTH18, xyloglucan endotransglucosylase/hydrolase 18 -0.216 -0.053
73 254384_at AT4G21870 [HSP20-like chaperones superfamily protein] -0.215 -0.098