4.0:Information of module
upb1-1 elongation zone
In comparison with root cells cortex 140mM NaCl 20 hours help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0010054 trichoblast differentiation BP 2.837e-07
GO:0010053 root epidermal cell differentiation BP 4.197e-07
GO:0090627 plant epidermal cell differentiation BP 4.895e-07
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0042594 response to starvation BP 1.002e-05
GO:0031667 response to nutrient levels BP 1.168e-05
GO:0009991 response to extracellular stimulus BP 2.603e-05
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
upb1-1 elongation zone		 Log2 signal ratio
root cells cortex 140mM NaCl 20 hours
1 250801_at AT5G04960 [Plant invertase/pectin methylesterase inhibitor superfamily] 1.018 -0.103
2 254044_at AT4G25820 ATXTH14, XTH14, xyloglucan endotransglucosylase/hydrolase 14, XTR9, xyloglucan endotransglycosylase 9 0.814 0.087
3 247871_at AT5G57530 AtXTH12, XTH12, xyloglucan endotransglucosylase/hydrolase 12 0.768 0.036
4 246991_at AT5G67400 RHS19, root hair specific 19 0.731 0.014
5 252238_at AT3G49960 [Peroxidase superfamily protein] 0.726 -0.010
6 264415_at AT1G43160 RAP2.6, related to AP2 6 0.693 -0.073
7 265350_at AT2G22620 [Rhamnogalacturonate lyase family protein] 0.674 -0.473
8 259624_at AT1G43020 unknown 0.648 -0.497
9 255516_at AT4G02270 RHS13, root hair specific 13 0.619 -0.043
10 258143_at AT3G18170 [Glycosyltransferase family 61 protein] 0.615 -0.261
11 252833_at AT4G40090 AGP3, arabinogalactan protein 3 0.589 -0.028
12 247170_at AT5G65530 [Protein kinase superfamily protein] 0.568 -0.243
13 252537_at AT3G45710 [Major facilitator superfamily protein] 0.558 -0.205
14 265359_at AT2G16720 ATMYB7, ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 7, ATY49, MYB7, myb domain protein 7 0.546 -0.172
15 261576_at AT1G01070 UMAMIT28, Usually multiple acids move in and out Transporters 28 0.532 -0.402
16 254015_at AT4G26140 BGAL12, beta-galactosidase 12 0.520 -0.257
17 254025_at AT4G25790 [CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein] 0.480 0.033
18 263437_at AT2G28670 ESB1, ENHANCED SUBERIN 1 0.456 -0.261
19 249626_at AT5G37540 [Eukaryotic aspartyl protease family protein] 0.446 -0.355
20 253613_at AT4G30320 [CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein] 0.436 -0.037
21 262743_at AT1G29020 [Calcium-binding EF-hand family protein] 0.424 -0.646
22 258323_at AT3G22750 [Protein kinase superfamily protein] 0.410 -0.056
23 266968_at AT2G39360 [Protein kinase superfamily protein] 0.405 -0.116
24 247444_at AT5G62630 HIPL2, hipl2 protein precursor 0.399 -0.019
25 247333_at AT5G63600 ATFLS5, FLS5, flavonol synthase 5 0.384 -0.091
26 265645_at AT2G27370 CASP3, Casparian strip membrane domain protein 3 0.382 -0.379
27 257381_at AT2G37950 [RING/FYVE/PHD zinc finger superfamily protein] 0.380 -0.341
28 248263_at AT5G53370 ATPMEPCRF, PECTIN METHYLESTERASE PCR FRAGMENT F, PMEPCRF, pectin methylesterase PCR fragment F 0.359 -0.152
29 251918_at AT3G54040 [PAR1 protein] 0.354 0.051
30 254500_at AT4G20110 BP80-3;1, binding protein of 80 kDa 3;1, VSR3;1, VACUOLAR SORTING RECEPTOR 3;1, VSR7, VACUOLAR SORTING RECEPTOR 7 0.336 -0.011
31 256525_at AT1G66180 [Eukaryotic aspartyl protease family protein] 0.324 -0.025
32 261815_at AT1G08320 bZIP21, TGA9, TGACG (TGA) motif-binding protein 9 0.310 -0.232
33 248750_at AT5G47530 [Auxin-responsive family protein] 0.306 -0.435
34 264545_at AT1G55670 PSAG, photosystem I subunit G 0.302 -0.078
35 246367_at AT1G51880 RHS6, root hair specific 6 0.302 -0.058
36 265038_at AT1G03920 [Protein kinase family protein] 0.298 -0.412
37 262049_at AT1G80180 unknown 0.289 0.095
38 260527_at AT2G47270 UPB1, UPBEAT1 -1.315 0.077
39 266276_at AT2G29330 TRI, tropinone reductase -0.633 0.391
40 264049_at AT2G22390 ATRABA4E, RABA4E, RAB GTPase homolog A4E -0.380 0.078
41 245668_at AT1G28330 AtDRM1, DRM1, DORMANCY-ASSOCIATED PROTEIN 1, DYL1, dormancy-associated protein-like 1 -0.376 0.129
42 261929_at AT1G22460 [O-fucosyltransferase family protein] -0.354 0.080
43 249824_at AT5G23380 unknown -0.347 0.058
44 250455_at AT5G09980 PROPEP4, elicitor peptide 4 precursor -0.337 -0.043
45 266239_at AT2G29530 TIM10 -0.320 0.085
46 253874_at AT4G27450 [Aluminium induced protein with YGL and LRDR motifs] -0.308 0.460
47 250662_at AT5G07010 ATST2A, ARABIDOPSIS THALIANA SULFOTRANSFERASE 2A, ST2A, sulfotransferase 2A -0.291 -0.081
48 258333_at AT3G16000 MFP1, MAR binding filament-like protein 1 -0.280 0.029
49 248975_at AT5G45040 CYTC6A, cytochrome c6A -0.278 0.096
50 263184_at AT1G05560 UGT1, UDP-GLUCOSE TRANSFERASE 1, UGT75B1, UDP-glucosyltransferase 75B1 -0.277 -0.113
51 257374_at AT2G43280 [Far-red impaired responsive (FAR1) family protein] -0.275 -0.005
52 249872_at AT5G23130 [Peptidoglycan-binding LysM domain-containing protein] -0.271 -0.184
53 245925_at AT5G28770 AtbZIP63, Arabidopsis thaliana basic leucine zipper 63, BZO2H3 -0.267 -0.336
54 245947_at AT5G19530 ACL5, ACAULIS 5 -0.267 -0.095
55 260472_at AT1G10990 unknown -0.261 0.045
56 246396_at AT1G58180 ATBCA6, A. THALIANA BETA CARBONIC ANHYDRASE 6, BCA6, beta carbonic anhydrase 6 -0.260 0.104
57 252361_at AT3G48490 unknown -0.258 0.107
58 245123_at AT2G47450 CAO, CHAOS, CPSRP43, CHLOROPLAST SIGNAL RECOGNITION PARTICLE 43 -0.253 -0.100
59 249650_at AT5G37055 ATSWC6, SEF, SERRATED LEAVES AND EARLY FLOWERING -0.243 0.096
60 261311_at AT1G05770 [Mannose-binding lectin superfamily protein] -0.243 -0.081
61 249694_at AT5G35790 G6PD1, glucose-6-phosphate dehydrogenase 1 -0.241 0.036
62 249285_at AT5G41960 unknown -0.217 0.186
63 249494_at AT5G39050 PMAT1, phenolic glucoside malonyltransferase 1 -0.216 -0.131
64 261058_at AT1G01370 CENH3, CENTROMERIC HISTONE H3, HTR12 -0.214 0.178
65 246212_at AT4G36930 SPT, SPATULA -0.214 0.330
66 250718_at AT5G06240 emb2735, embryo defective 2735 -0.212 0.108
67 257132_at AT3G20230 [Ribosomal L18p/L5e family protein] -0.209 0.230
68 261892_at AT1G80840 ATWRKY40, WRKY40, WRKY DNA-binding protein 40 -0.208 0.035
69 246211_at AT4G36730 AtGBF1, GBF1, G-box binding factor 1 -0.192 -0.114
70 244972_at ATCG00680 PSBB, photosystem II reaction center protein B -0.183 0.027
71 260531_at AT2G47240 CER8, ECERIFERUM 8, LACS1, LONG-CHAIN ACYL-COA SYNTHASE 1 -0.182 -0.354
72 258969_at AT3G10680 [HSP20-like chaperones superfamily protein] -0.182 0.002
73 256805_at AT3G20930 ORRM1, Organelle RRM protein 1 -0.181 0.206