4.0:Information of module
ulp1c ulp1d
In comparison with root epidermis and lateral root cap -S help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0070972 protein localization to endoplasmic reti... BP 2.552e-04
GO:0009556 microsporogenesis BP 8.454e-04
GO:0048236 plant-type spore development BP 1.362e-03
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:1901360 organic cyclic compound metabolic proces... BP 1.147e-08
GO:0006725 cellular aromatic compound metabolic pro... BP 1.687e-08
GO:0006807 nitrogen compound metabolic process BP 2.360e-08
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
ulp1c ulp1d 		Log2 signal ratio
root epidermis and lateral root cap -S
1 256940_at AT3G30720 QQS, QUA-QUINE STARCH 0.582 -0.107
2 260145_at AT1G52920 GCR2, G-PROTEIN COUPLED RECEPTOR 2, GPCR, G protein coupled receptor 0.446 0.124
3 249727_at AT5G35490 ATMRU1, ARABIDOPSIS MTO 1 RESPONDING UP 1, MRU1, MTO 1 RESPONDING UP 1 0.288 0.076
4 262118_at AT1G02850 BGLU11, beta glucosidase 11 0.284 -0.374
5 264236_at AT1G54680 unknown 0.250 -0.312
6 258781_at AT3G11740 unknown 0.195 0.008
7 251141_at AT5G01075 [Glycosyl hydrolase family 35 protein] 0.191 -0.011
8 265327_at AT2G18210 unknown 0.186 -0.113
9 263742_at AT2G20625 unknown 0.165 0.369
10 244934_at ATCG01080 NDHG 0.164 0.239
11 259618_at AT1G48000 AtMYB112, myb domain protein 112, MYB112, myb domain protein 112 0.161 0.035
12 255192_at AT4G07380 unknown 0.161 0.039
13 264680_at AT1G65510 unknown 0.161 -0.310
14 265367_at AT2G13270 unknown 0.160 0.024
15 261785_at AT1G08230 [Transmembrane amino acid transporter family protein] 0.158 0.020
16 249042_at AT5G44350 [ethylene-responsive nuclear protein -related] 0.153 -0.033
17 266488_at AT2G47670 PMEI6, PECTIN METHYLESTERASE INHIBITOR 6 0.150 0.018
18 259324_at AT3G05310 MIRO3, MIRO-related GTP-ase 3 0.149 0.020
19 256032_at AT1G34090 [copia-like retrotransposon family, has a 8.8e-131 P-value blast match to GB:BAA78423 polyprotein (Ty1_Copia-element) (Arabidopsis thaliana)GB:BAA78423 polyprotein (Ty1_Copia-element) (Arabidopsis thaliana)GB:BAA78423 polyprotein (Ty1_Copia-element) (Arabidopsis thaliana)gi|4996361|dbj|BAA78423.1| polyprotein (Arabidopsis thaliana) (Ty1_Copia-element)] 0.147 -0.025
20 260151_at AT1G52910 unknown 0.146 -0.112
21 258880_at AT3G06420 ATG8H, autophagy 8h 0.146 -0.280
22 264866_at AT1G24140 [Matrixin family protein] 0.142 -0.180
23 262339_at AT1G64000 ATWRKY56, WRKY56, WRKY DNA-binding protein 56 0.141 0.014
24 248406_at AT5G51490 [Plant invertase/pectin methylesterase inhibitor superfamily] 0.137 0.155
25 246523_at AT5G15850 ATCOL1, BBX2, B-box domain protein 2, COL1, CONSTANS-like 1 0.134 -0.106
26 246841_at AT5G26700 [RmlC-like cupins superfamily protein] 0.132 -0.148
27 249657_at AT5G37140 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] 0.131 -0.092
28 244996_at ATCG00160 RPS2, ribosomal protein S2 0.130 0.263
29 254537_at AT4G19730 [Glycosyl hydrolase superfamily protein] 0.130 -0.026
30 263744_at AT2G21420 [IBR domain containing protein] 0.130 -0.080
31 249333_at AT5G40990 GLIP1, GDSL lipase 1 0.130 -0.035
32 260897_at AT1G29330 AERD2, ARABIDOPSIS ENDOPLASMIC RETICULUM RETENTION DEFECTIVE 2, ATERD2, ARABIDOPSIS THALIANA ENDOPLASMIC RETICULUM RETENTION DEFECTIVE 2, ERD2, ENDOPLASMIC RETICULUM RETENTION DEFECTIVE 2 0.128 -0.051
33 255359_at AT4G03950 [Nucleotide/sugar transporter family protein] 0.126 0.014
34 260684_at AT1G17590 NF-YA8, nuclear factor Y, subunit A8 0.125 -0.011
35 252119_at AT3G51030 ATTRX H1, ARABIDOPSIS THALIANA THIOREDOXIN H-TYPE 1, ATTRX1, thioredoxin H-type 1, TRX1, thioredoxin H-type 1 0.125 0.208
36 249958_at AT5G18970 [AWPM-19-like family protein] 0.124 0.228
37 255892_at AT1G17910 [Wall-associated kinase family protein] 0.121 0.015
38 262819_at AT1G11600 CYP77B1, cytochrome P450, family 77, subfamily B, polypeptide 1 0.121 -0.036
39 246531_at AT5G15800 AGL2, AGAMOUS-like 2, SEP1, SEPALLATA1 0.120 -0.137
40 263260_at AT1G10570 OTS2, OVERLY TOLERANT TO SALT 2, ULP1C, UB-LIKE PROTEASE 1C -0.528 0.023
41 245025_at ATCG00130 ATPF -0.396 0.087
42 262199_at AT1G53800 unknown -0.381 -0.008
43 264268_at AT1G60220 OTS1, OVERLY TOLERANT TO SALT 1, ULP1D, UB-like protease 1D -0.281 0.025
44 245227_s_at AT1G08410 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.270 0.036
45 244965_at ATCG00590 ORF31 -0.223 -0.152
46 248236_at AT5G53870 AtENODL1, ENODL1, early nodulin-like protein 1 -0.213 -0.132
47 265032_at AT1G61580 ARP2, ARABIDOPSIS RIBOSOMAL PROTEIN 2, RPL3B, R-protein L3 B -0.210 0.474
48 266598_at AT2G46110 KPHMT1, ketopantoate hydroxymethyltransferase 1, PANB1 -0.175 0.320
49 245109_at AT2G41520 DJC62, DNA J protein C62, TPR15, tetratricopeptide repeat 15 -0.171 0.226
50 259433_at AT1G01570 [FUNCTIONS IN: transferase activity, transferring glycosyl groups] -0.162 -0.108
51 247362_at AT5G63140 ATPAP29, purple acid phosphatase 29, PAP29, PAP29, purple acid phosphatase 29 -0.161 0.270
52 267511_at AT2G45670 [calcineurin B subunit-related] -0.155 -0.381
53 266751_at AT2G47020 [Peptide chain release factor 1] -0.151 0.052
54 248679_at AT5G48830 unknown -0.147 0.133
55 257642_at AT3G25710 ATAIG1, BHLH32, basic helix-loop-helix 32, TMO5, TARGET OF MONOPTEROS 5 -0.145 0.377
56 252087_at AT3G52080 chx28, cation/hydrogen exchanger 28 -0.141 -0.023
57 249408_at AT5G40330 ATMYB23, MYB DOMAIN PROTEIN 23, ATMYBRTF, MYB23, myb domain protein 23 -0.137 -0.322
58 258971_at AT3G01990 ACR6, ACT domain repeat 6 -0.134 -0.042
59 251262_at AT3G62080 [SNF7 family protein] -0.133 0.136
60 251274_at AT3G61700 unknown -0.125 -0.046
61 262322_at AT1G27590 unknown -0.122 -0.076
62 250923_at AT5G03455 ACR2, ARSENATE REDUCTASE 2, ARATH;CDC25, AtACR2, CDC25 -0.121 -0.125
63 263738_at AT1G60060 [Serine/threonine-protein kinase WNK (With No Lysine)-related] -0.118 0.054
64 256594_at AT3G28520 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.118 -0.002
65 250970_at AT5G02770 MOS11, modifier of snc1, 11 -0.114 0.035
66 250674_at AT5G07130 LAC13, laccase 13 -0.112 -0.089
67 260199_at AT1G67590 [Remorin family protein] -0.111 0.212
68 261710_at AT1G32730 unknown -0.110 0.152
69 259483_at AT1G43980 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.105 0.220
70 253732_at AT4G29140 ADS1, ACTIVATED DISEASE SUSCEPTIBILITY 1 -0.103 0.101
71 265383_at AT2G16780 MSI02, MSI2, MULTICOPY SUPPRESSOR OF IRA1 2, NFC02, NFC2, NUCLEOSOME/CHROMATIN ASSEMBLY FACTOR GROUP C 2 -0.102 0.596
72 252441_at AT3G46780 PTAC16, plastid transcriptionally active 16 -0.102 -0.031
73 251083_at AT5G01590 TIC56, TRANSLOCON AT THE INNER ENVELOPE MEMBRANE OF CHLOROPLASTS 56 -0.102 0.338
74 249113_at AT5G43790 [Pentatricopeptide repeat (PPR) superfamily protein] -0.101 0.381
75 251375_at AT3G60410 unknown -0.101 -0.101
76 258024_at AT3G19360 [Zinc finger (CCCH-type) family protein] -0.101 0.316
77 249748_at AT5G24620 [Pathogenesis-related thaumatin superfamily protein] -0.100 0.113
78 244966_at ATCG00600 PETG -0.100 0.368