4.0:Information of module
ulp1c ulp1d
In comparison with CCA1-ox 6am non-polysomal help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0070972 protein localization to endoplasmic reti... BP 2.552e-04
GO:0009556 microsporogenesis BP 8.454e-04
GO:0048236 plant-type spore development BP 1.362e-03
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:1901360 organic cyclic compound metabolic proces... BP 1.147e-08
GO:0006725 cellular aromatic compound metabolic pro... BP 1.687e-08
GO:0006807 nitrogen compound metabolic process BP 2.360e-08
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
ulp1c ulp1d 		Log2 signal ratio
CCA1-ox 6am non-polysomal
1 256940_at AT3G30720 QQS, QUA-QUINE STARCH 0.582 -0.031
2 260145_at AT1G52920 GCR2, G-PROTEIN COUPLED RECEPTOR 2, GPCR, G protein coupled receptor 0.446 0.082
3 249727_at AT5G35490 ATMRU1, ARABIDOPSIS MTO 1 RESPONDING UP 1, MRU1, MTO 1 RESPONDING UP 1 0.288 -0.265
4 262118_at AT1G02850 BGLU11, beta glucosidase 11 0.284 0.131
5 264236_at AT1G54680 unknown 0.250 0.237
6 258781_at AT3G11740 unknown 0.195 0.043
7 251141_at AT5G01075 [Glycosyl hydrolase family 35 protein] 0.191 0.038
8 265327_at AT2G18210 unknown 0.186 0.311
9 263742_at AT2G20625 unknown 0.165 -0.127
10 244934_at ATCG01080 NDHG 0.164 0.337
11 259618_at AT1G48000 AtMYB112, myb domain protein 112, MYB112, myb domain protein 112 0.161 -0.083
12 255192_at AT4G07380 unknown 0.161 0.122
13 264680_at AT1G65510 unknown 0.161 0.022
14 265367_at AT2G13270 unknown 0.160 0.072
15 261785_at AT1G08230 [Transmembrane amino acid transporter family protein] 0.158 0.034
16 249042_at AT5G44350 [ethylene-responsive nuclear protein -related] 0.153 -0.046
17 266488_at AT2G47670 PMEI6, PECTIN METHYLESTERASE INHIBITOR 6 0.150 0.195
18 259324_at AT3G05310 MIRO3, MIRO-related GTP-ase 3 0.149 0.160
19 256032_at AT1G34090 [copia-like retrotransposon family, has a 8.8e-131 P-value blast match to GB:BAA78423 polyprotein (Ty1_Copia-element) (Arabidopsis thaliana)GB:BAA78423 polyprotein (Ty1_Copia-element) (Arabidopsis thaliana)GB:BAA78423 polyprotein (Ty1_Copia-element) (Arabidopsis thaliana)gi|4996361|dbj|BAA78423.1| polyprotein (Arabidopsis thaliana) (Ty1_Copia-element)] 0.147 -0.007
20 260151_at AT1G52910 unknown 0.146 -0.015
21 258880_at AT3G06420 ATG8H, autophagy 8h 0.146 0.014
22 264866_at AT1G24140 [Matrixin family protein] 0.142 0.059
23 262339_at AT1G64000 ATWRKY56, WRKY56, WRKY DNA-binding protein 56 0.141 0.035
24 248406_at AT5G51490 [Plant invertase/pectin methylesterase inhibitor superfamily] 0.137 -0.146
25 246523_at AT5G15850 ATCOL1, BBX2, B-box domain protein 2, COL1, CONSTANS-like 1 0.134 -0.052
26 246841_at AT5G26700 [RmlC-like cupins superfamily protein] 0.132 -0.010
27 249657_at AT5G37140 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] 0.131 -0.022
28 244996_at ATCG00160 RPS2, ribosomal protein S2 0.130 0.073
29 254537_at AT4G19730 [Glycosyl hydrolase superfamily protein] 0.130 0.019
30 263744_at AT2G21420 [IBR domain containing protein] 0.130 0.130
31 249333_at AT5G40990 GLIP1, GDSL lipase 1 0.130 -0.167
32 260897_at AT1G29330 AERD2, ARABIDOPSIS ENDOPLASMIC RETICULUM RETENTION DEFECTIVE 2, ATERD2, ARABIDOPSIS THALIANA ENDOPLASMIC RETICULUM RETENTION DEFECTIVE 2, ERD2, ENDOPLASMIC RETICULUM RETENTION DEFECTIVE 2 0.128 0.126
33 255359_at AT4G03950 [Nucleotide/sugar transporter family protein] 0.126 0.129
34 260684_at AT1G17590 NF-YA8, nuclear factor Y, subunit A8 0.125 -0.013
35 252119_at AT3G51030 ATTRX H1, ARABIDOPSIS THALIANA THIOREDOXIN H-TYPE 1, ATTRX1, thioredoxin H-type 1, TRX1, thioredoxin H-type 1 0.125 0.096
36 249958_at AT5G18970 [AWPM-19-like family protein] 0.124 0.053
37 255892_at AT1G17910 [Wall-associated kinase family protein] 0.121 -0.072
38 262819_at AT1G11600 CYP77B1, cytochrome P450, family 77, subfamily B, polypeptide 1 0.121 0.093
39 246531_at AT5G15800 AGL2, AGAMOUS-like 2, SEP1, SEPALLATA1 0.120 0.067
40 263260_at AT1G10570 OTS2, OVERLY TOLERANT TO SALT 2, ULP1C, UB-LIKE PROTEASE 1C -0.528 -0.156
41 245025_at ATCG00130 ATPF -0.396 0.048
42 262199_at AT1G53800 unknown -0.381 -0.009
43 264268_at AT1G60220 OTS1, OVERLY TOLERANT TO SALT 1, ULP1D, UB-like protease 1D -0.281 0.131
44 245227_s_at AT1G08410 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.270 0.101
45 244965_at ATCG00590 ORF31 -0.223 0.086
46 248236_at AT5G53870 AtENODL1, ENODL1, early nodulin-like protein 1 -0.213 0.021
47 265032_at AT1G61580 ARP2, ARABIDOPSIS RIBOSOMAL PROTEIN 2, RPL3B, R-protein L3 B -0.210 0.015
48 266598_at AT2G46110 KPHMT1, ketopantoate hydroxymethyltransferase 1, PANB1 -0.175 -0.049
49 245109_at AT2G41520 DJC62, DNA J protein C62, TPR15, tetratricopeptide repeat 15 -0.171 0.075
50 259433_at AT1G01570 [FUNCTIONS IN: transferase activity, transferring glycosyl groups] -0.162 -0.028
51 247362_at AT5G63140 ATPAP29, purple acid phosphatase 29, PAP29, PAP29, purple acid phosphatase 29 -0.161 -0.051
52 267511_at AT2G45670 [calcineurin B subunit-related] -0.155 -0.163
53 266751_at AT2G47020 [Peptide chain release factor 1] -0.151 -0.178
54 248679_at AT5G48830 unknown -0.147 0.067
55 257642_at AT3G25710 ATAIG1, BHLH32, basic helix-loop-helix 32, TMO5, TARGET OF MONOPTEROS 5 -0.145 0.144
56 252087_at AT3G52080 chx28, cation/hydrogen exchanger 28 -0.141 0.025
57 249408_at AT5G40330 ATMYB23, MYB DOMAIN PROTEIN 23, ATMYBRTF, MYB23, myb domain protein 23 -0.137 -0.114
58 258971_at AT3G01990 ACR6, ACT domain repeat 6 -0.134 -0.143
59 251262_at AT3G62080 [SNF7 family protein] -0.133 -0.122
60 251274_at AT3G61700 unknown -0.125 0.173
61 262322_at AT1G27590 unknown -0.122 -0.045
62 250923_at AT5G03455 ACR2, ARSENATE REDUCTASE 2, ARATH;CDC25, AtACR2, CDC25 -0.121 0.016
63 263738_at AT1G60060 [Serine/threonine-protein kinase WNK (With No Lysine)-related] -0.118 0.339
64 256594_at AT3G28520 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.118 -0.004
65 250970_at AT5G02770 MOS11, modifier of snc1, 11 -0.114 0.036
66 250674_at AT5G07130 LAC13, laccase 13 -0.112 -0.172
67 260199_at AT1G67590 [Remorin family protein] -0.111 0.087
68 261710_at AT1G32730 unknown -0.110 0.267
69 259483_at AT1G43980 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.105 0.050
70 253732_at AT4G29140 ADS1, ACTIVATED DISEASE SUSCEPTIBILITY 1 -0.103 0.382
71 265383_at AT2G16780 MSI02, MSI2, MULTICOPY SUPPRESSOR OF IRA1 2, NFC02, NFC2, NUCLEOSOME/CHROMATIN ASSEMBLY FACTOR GROUP C 2 -0.102 0.023
72 252441_at AT3G46780 PTAC16, plastid transcriptionally active 16 -0.102 0.066
73 251083_at AT5G01590 TIC56, TRANSLOCON AT THE INNER ENVELOPE MEMBRANE OF CHLOROPLASTS 56 -0.102 -0.377
74 249113_at AT5G43790 [Pentatricopeptide repeat (PPR) superfamily protein] -0.101 0.151
75 251375_at AT3G60410 unknown -0.101 0.212
76 258024_at AT3G19360 [Zinc finger (CCCH-type) family protein] -0.101 0.312
77 249748_at AT5G24620 [Pathogenesis-related thaumatin superfamily protein] -0.100 -0.083
78 244966_at ATCG00600 PETG -0.100 0.181